mRNA_E-fasciculatus_F_contig1485.3455.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI) HSP 1 Score: 232 bits (591), Expect = 2.530e-67 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 3
Query: 9 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKMDPGTNVAPMAM 344
MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQ+LADKMDPGTNVAPMAM
Sbjct: 1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKMDPGTNVAPMAM 112
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.780e-47 Identity = 82/111 (73.87%), Postives = 94/111 (84.68%), Query Frame = 3
Query: 6 VMAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKMDPGTNVAPM 338
+ ARIEYSEKYQDD +EYRHVILPK+LAK LPK+R+L+EQEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GK+DP LE+EAK AYQ +L N APM
Sbjct: 18 MAVARIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE------LNQAPM 122
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 169 bits (427), Expect = 4.330e-45 Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 3
Query: 9 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLA 302
MA+RIEYSEKY DD+FEYRHVILPK+LAK LPK+R+L EQEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKVD LE++AK AY LA
Sbjct: 20 MASRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLA 117
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.490e-43 Identity = 72/97 (74.23%), Postives = 86/97 (88.66%), Query Frame = 3
Query: 9 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 299
MA+RIEYSEKY DD+ EYRHVILPK++A+ LPK R+LTE EWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKV+ LE+EAK+ Y + +
Sbjct: 1 MASRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESM 97
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.060e-42 Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 3
Query: 18 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLA 302
+IEYSEKYQD +EYRHVILPKD A+ LPK+R LTE EWR +GVQQSRGW HYA H+PEPHILLF+RPLGTDPVSG+VDP LE+EA++ YQQ+LA
Sbjct: 5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.060e-42 Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 3
Query: 12 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQ 290
A+RIEYSEKY D + EYRHVILPKDLAK LPK+R+L+E EWRG+GVQQSRGWMHYAIHRPEPHILLF+RPLGTDP SG+VDP LE+EA++ Y+
Sbjct: 4 ASRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYK 96
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A7S1CQT6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQT6_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.400e-42 Identity = 71/96 (73.96%), Postives = 83/96 (86.46%), Query Frame = 3
Query: 9 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQD 296
+A RIEYSEKYQDD FEYRHVILPK+LAK LPK R+L E EWRG+GVQQSRGW+HYA HRPEPH+LLF+RPLGTDP +GK+D VL +EA+ Y +D
Sbjct: 5 IAKRIEYSEKYQDDKFEYRHVILPKELAKSLPKERLLLEPEWRGIGVQQSRGWVHYACHRPEPHVLLFRRPLGTDPTTGKIDKVLAREARDQYYKD 100
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA) HSP 1 Score: 160 bits (404), Expect = 8.240e-42 Identity = 71/100 (71.00%), Postives = 87/100 (87.00%), Query Frame = 3
Query: 12 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKM 311
A+RIEYSEKY D+ FEYRHVILPK+LAK +PK+R+L EQEWR LGVQQSRGW HYAIHRPEPHILLF+RPLGTDP +G+VD L++EAK++Y + L + +
Sbjct: 35 ASRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRENL 134
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A835YHQ2_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ2_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.610e-41 Identity = 71/97 (73.20%), Postives = 85/97 (87.63%), Query Frame = 3
Query: 9 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 299
M RIEYS+KYQD ++EYRHVILPK+LA+GLP +R+L E+EWR LGVQQSRGW+HYAIHRPEPHILLF RPLGTDP+SG+VDP E+EAK+ Y + L
Sbjct: 1 MGTRIEYSDKYQDSNWEYRHVILPKELARGLPNTRLLQEEEWRLLGVQQSRGWVHYAIHRPEPHILLFHRPLGTDPLSGQVDPEKEREAKEGYAEHL 97
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE) HSP 1 Score: 157 bits (396), Expect = 3.450e-41 Identity = 71/96 (73.96%), Postives = 85/96 (88.54%), Query Frame = 3
Query: 18 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLAD 305
RI+YSEKY D SFEYRHVILPK+ AK LP+SR+LTE EWR LGVQQSRGW HYA+H PEPHILLF+RPLGT+PV+G+VDP LE+EAK+ Y ++L+D
Sbjct: 3 RIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSD 98 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1485.3455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1485.3455.1 >prot_E-fasciculatus_F_contig1485.3455.1 ID=prot_E-fasciculatus_F_contig1485.3455.1|Name=mRNA_E-fasciculatus_F_contig1485.3455.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=113bp MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSback to top mRNA from alignment at E-fasciculatus_F_contig1485:8636..16480+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1485.3455.1 ID=mRNA_E-fasciculatus_F_contig1485.3455.1|Name=mRNA_E-fasciculatus_F_contig1485.3455.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7845bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1485:8636..16480+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1485:8636..16480+ >mRNA_E-fasciculatus_F_contig1485.3455.1 ID=mRNA_E-fasciculatus_F_contig1485.3455.1|Name=mRNA_E-fasciculatus_F_contig1485.3455.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=678bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1485:8636..16480+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |