prot_E-fasciculatus_F_contig14843.3453.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14843.3453.1
Unique Nameprot_E-fasciculatus_F_contig14843.3453.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length190
Homology
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Match: A0A6H5JYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.600e-28
Identity = 82/119 (68.91%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    1 RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGSHRPGNQVIDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDRNLAAYCRFAERRR 119
            REL+IKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG+HRPGNQVIDAA                    XXXXXXXXXXXXXXXXXX             LDRNLAAYCRFA  RR
Sbjct:  232 RELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQVIDAAATAAAALSGREAAQAPCGNDXXXXXXXXXXXXXXXXXXRRGP---------LDRNLAAYCRFARERR 341          
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Match: D8LDP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP6_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.710e-24
Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGSHRPGNQ 47
            REL+IKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG+HRPGNQ
Sbjct:  225 RELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ 271          
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Match: A0A835ZF17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF17_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.330e-8
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG 40
            RE  + RFA  F    W DPSELHGCG+ A+DSW+IFCLG
Sbjct:  119 RERTLARFALEFATKPWRDPSELHGCGKLAADSWRIFCLG 158          
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Match: A0A2P6VFC8_9CHLO (DNA glycosylase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFC8_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 3.280e-6
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG 40
            R   ++  A GFLA+ W +PS+ HGCG+F SDS+ IFC G
Sbjct:  150 RLAAVRSIAHGFLATDWQEPSQFHGCGKFVSDSYHIFCRG 189          
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Match: A0A7S2PHI3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHI3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.650e-5
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGSHR 43
            RE  +K+FA+GFL   W   SELHGCG FAS S+ IFC G  +
Sbjct:  117 REKTMKKFAQGFLRP-WTQVSELHGCGAFASSSFDIFCRGDFK 158          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14843.3453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JYV6_9PHAE1.600e-2868.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDP6_ECTSI2.710e-2495.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF17_9STRA1.330e-862.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P6VFC8_9CHLO3.280e-652.50DNA glycosylase isoform A n=1 Tax=Micractinium con... [more]
A0A7S2PHI3_9STRA3.650e-555.81Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14843contigE-fasciculatus_F_contig14843:2619..3188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14843.3453.1mRNA_E-fasciculatus_F_contig14843.3453.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14843 2619..3188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14843.3453.1 ID=prot_E-fasciculatus_F_contig14843.3453.1|Name=mRNA_E-fasciculatus_F_contig14843.3453.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=190bp
RELVIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGSHRPGNQVID
AAAAAAAAAVAAAAVLSGREAATAPCGNDGGASKKKNVRSSGGGGGGGRR
GGSLDRNLAAYCRFAERRRWSSEGGGVTGGDVLGAGDSAAATTASSTNKK
RRRKTGLVAEENVAVRAAAKRRTGGGDSGRQRRRRGSGAS
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