prot_E-fasciculatus_F_contig1483.3445.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1483.3445.1
Unique Nameprot_E-fasciculatus_F_contig1483.3445.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length571
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1483.3445.1 vs. uniprot
Match: A0A6H5J724_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J724_9PHAE)

HSP 1 Score: 702 bits (1813), Expect = 2.340e-229
Identity = 413/570 (72.46%), Postives = 441/570 (77.37%), Query Frame = 0 
Query:    3 ADPSVCTGVQQSAASMAASDVTHAVATASSAMPSHADPRGHVAVTSTQA-SQLGHGRGMQNMWAHLPVSAATQHLARPTVVGAVAEATAAAHAYARAQGAPFGGWASTHGAGQLACSSAGTSASPTSASFTGIPPRAPPACNIAXXXXXMSAAVMAYPLAPFHHPGQEPAVPGTCIEPTSYEAQIRADLTPSMW-GSGGGGMSSGSTFQAAQRPLVASGNDGRCSPTLPQQQHVDGAAAMRGDAASSTSANGERLEPSLTSSSEKTPXXXAVAATEPLPEPVSAVVSQSTSAGLPSATATAPAKMVPALPSVQPTRPPGRVLRGGERTPTPPGAHGSSALSGAVIGGPAAAGGQSARVGTPSPIPPPRSAPESAVDTWPSSGKGAGAGGAALGTLVEGVLEETGRESCVGGAGGXXXXXXXXXXXXXXXXXGEEQKLERARVAKRLRREALLRRCITSAEHLHLEFRSVEAADAMDRGDDELSRLYLTEGDSIIPDNTRWGVRPRGQPLPYDCLFPDDKARGAVRQGTSAGGRKPARNXXXXXXXXXXXXXXXXXXSTAEQPEFTGEWRD 570
            A PS CT    S  SMAA DV+HAV TASSAMPSHADP GHV VTSTQA SQLGHGR +QNMWAHLPVSAAT HL RPTVVGAVAEATAAAHAYARAQ A FG WASTHGAGQ ACSSAG +AS TSASFTGIPPR P ACN       MSAAV+A+PLAP HHPG+EPAVPGTC E TSYEAQIRA LTPSMW GS GG + +GSTFQAAQRP VASGNDGR +P LPQQQHVDGAAA RGDA  STS NGERLEPSL+SSSEK P   A+A T PLP+PVSAVVS+ST A LPSATATAPA MVPAL S QPT+PPGR L GG+RTPTPPG H SS+L   V  GP A G QSARV T S + PPR    SAV+T PSSGKGA     A GTLV G LE+T RESCVGGAGG                 G +QKLERA+VAK+LRREALLRRCITSAE+LHLEFRSVEAADAMDRGDDELSRLYLTE DSIIPDNTRWGVRPRGQPLPYDCLFPDD+ARGAVR+ +SAG ++ ARN                  STAEQ EF GEWRD
Sbjct: 1709 AGPSGCTAEHLSV-SMAARDVSHAVTTASSAMPSHADPPGHVVVTSTQAMSQLGHGREIQNMWAHLPVSAATHHLHRPTVVGAVAEATAAAHAYARAQVASFGRWASTHGAGQSACSSAGATASSTSASFTGIPPRVPQACN-------MSAAVLAFPLAPLHHPGREPAVPGTCTEATSYEAQIRAVLTPSMWRGSWGGAIRTGSTFQAAQRPTVASGNDGRYNPMLPQQQHVDGAAASRGDATPSTSTNGERLEPSLSSSSEKAPPPLAMAGTGPLPQPVSAVVSRSTPAALPSATATAPATMVPALQSTQPTQPPGRALNGGKRTPTPPGTHESSSLPRVVAAGPPAPGSQSARVSTSSSLLPPRGTSGSAVNTCPSSGKGAXXXXXASGTLVGGELEKTRRESCVGGAGGGGAPAKGQPAVGREGVEGVQQKLERAKVAKKLRREALLRRCITSAENLHLEFRSVEAADAMDRGDDELSRLYLTERDSIIPDNTRWGVRPRGQPLPYDCLFPDDEARGAVRRKSSAGDQRLARNKKCRKGSWGGSRGGGRR-STAEQAEFVGEWRD 2269
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1483.3445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J724_9PHAE2.340e-22972.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1483contigE-fasciculatus_F_contig1483:6441..8949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1483.3445.1mRNA_E-fasciculatus_F_contig1483.3445.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1483 6331..10347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1483.3445.1 ID=prot_E-fasciculatus_F_contig1483.3445.1|Name=mRNA_E-fasciculatus_F_contig1483.3445.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=571bp
MSADPSVCTGVQQSAASMAASDVTHAVATASSAMPSHADPRGHVAVTSTQ
ASQLGHGRGMQNMWAHLPVSAATQHLARPTVVGAVAEATAAAHAYARAQG
APFGGWASTHGAGQLACSSAGTSASPTSASFTGIPPRAPPACNIAPPACN
MSAAVMAYPLAPFHHPGQEPAVPGTCIEPTSYEAQIRADLTPSMWGSGGG
GMSSGSTFQAAQRPLVASGNDGRCSPTLPQQQHVDGAAAMRGDAASSTSA
NGERLEPSLTSSSEKTPPPPAVAATEPLPEPVSAVVSQSTSAGLPSATAT
APAKMVPALPSVQPTRPPGRVLRGGERTPTPPGAHGSSALSGAVIGGPAA
AGGQSARVGTPSPIPPPRSAPESAVDTWPSSGKGAGAGGAALGTLVEGVL
EETGRESCVGGAGGGGAPAKGQPAVGREAVEGEEQKLERARVAKRLRREA
LLRRCITSAEHLHLEFRSVEAADAMDRGDDELSRLYLTEGDSIIPDNTRW
GVRPRGQPLPYDCLFPDDKARGAVRQGTSAGGRKPARNKKRRKGSSGGSR
GGGGRRSTAEQPEFTGEWRD*
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