mRNA_E-fasciculatus_F_contig14811.3436.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: D7G998_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G998_ECTSI) HSP 1 Score: 302 bits (774), Expect = 3.740e-100 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 1
Query: 1 QTKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFVAR 456
QTKDLVRDAF QPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRT+QVFPKIDLVEE+ ENGAGQGRS ITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFVAR
Sbjct: 35 QTKDLVRDAFTQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTVQVFPKIDLVEEKGENGAGQGRSLITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFVAR 186
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A7S2FJY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FJY7_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.240e-36 Identity = 65/125 (52.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 1 QTKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVE-EEAENGAGQ-GRSRITNPSSPEYMAAVCTFD 369
Q DL++ AF +P+Q E LRFTF++GGGK +RQ+YD L +Y+SA+LR IG+ EDRAA+A +EC GS+KSQHDT K I+TL VFP++ + + GAG+ +S +++ SP Y+AAVC FD
Sbjct: 32 QADDLMKAAFTEPLQVPEMLRFTFVVGGGKN-SRQRYDPALTKYISASLRSIGYEEDRAASACIECAGSFKSQHDTDKNIKTLLVFPRVTITGGDSGGGGAGEESQSGLSDLGSPGYLAAVCNFD 155
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A7S2ST43_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST43_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.680e-34 Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 1 QTKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAG---------------QGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFV 450
Q LV+ AF +P+ A + LRFTF++G GK RQKYD L ++++AALR IGF EDR A+A +ECQGS+K QHDT K ++TLQVFP++DL +GAG + + +++ SP Y+A V + T+++MV+ K SW Q+R+LL L +
Sbjct: 44 QIDGLVQAAFKEPLPAPQMLRFTFVVGAGKLA-RQKYDPQLPKFMAAALRGIGFTEDRTASACLECQGSFKQQHDTDKNLKTLQVFPRVDL-----RSGAGAXXXXXXXXXXXXXXEQQRDLSDLGSPGYLATVASQPTYEKMVRGKTQSWAQRRQLLAELQAMA 202
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A835ZCH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH2_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.580e-34 Identity = 64/152 (42.11%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 1 QTKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFVAR 456
Q + V D F +P++ EP++ TF++G GK +RQKY DL +Y++ ALRE+GF EDRAA+A EC G++KSQHDT K ++ + VFP +DL + + A C FDTF+EMV K SW Q++RL R L R
Sbjct: 16 QVRTYVMDHFTKPMEGAEPIKLTFVVGAGKG-DRQKYHPDLSKYMTTALRELGFEEDRAASACKECMGTFKSQHDTSKNLKFMHVFPHVDLK----SGNEASAQEICAEQRGVHLLCASCEFDTFKEMVAVKTQSWGQRKRLCRALQDMAER 162
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A7S0SXP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXP9_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.710e-30 Identity = 57/143 (39.86%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 7 KDLVRDAFAQPIQA-TEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLR 432
KDL+ AF++P+ T+ +RFTF++GGGK R +YD DL ++L+ ALRE+G+ ED++A + QG+YK QHDT + ++ L V+P + + + Q ++ + +SPEY+ C TF+E+V K SW Q++RLL+
Sbjct: 35 KDLIISAFSKPLTIPTKMIRFTFIVGGGKLV-RSRYDEDLTKWLTTALREVGYVEDKSAAETFDSQGTYKQQHDTGQNLKYLIVYPHVTCSK---QTNNEQASTKTIDVNSPEYIVINCDLSTFKEIVTTKTPSWRQRKRLLK 173
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A7R9WI21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI21_9STRA) HSP 1 Score: 116 bits (291), Expect = 6.720e-30 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 16 VRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEA------ENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHL 438
+ DAF++P+ +E +R TF+ G GK RQKYD + + +S+ALR++G+ EDRAA+ ++EC G++KSQHDT K ++T+ VFPKI EE E G + SP+ M A+ + F M+Q K SW QK+ L+ L
Sbjct: 32 ITDAFSEPLPLSEMIRVTFITGAGKL-GRQKYDENAAKAVSSALRDLGYEEDRAASCVVECGGTFKSQHDTGKNLKTVVVFPKITGPSEEGGVKEAMEKMDLAGGKSLLEEGSPDQMIAMSSSPVFARMLQSKCSSWAQKKGCLKSL 177
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A1W0A3C4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3C4_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.000e-28 Identity = 55/145 (37.93%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 4 TKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHL 438
T++LV AF++P + E +RFTF++GGGK R KY +L ++++ ALR+IGF EDR+A +CQG++K QHDT + ++T+ VFPK+ VE++A + + PE + C + F++++ ++ SW QK+R +R +
Sbjct: 23 TRELVTAAFSEPFELNEMIRFTFVVGGGKLV-RSKYPEELPKWMTGALRDIGFLEDRSAACTWDCQGTFKQQHDTGQNLKTILVFPKV--VEKKASSAEQPAAKGPSVQEIPELLLLSCDLEDFEKLLPLELPSWTQKKRAVRFI 164
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: W4FEM2_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEM2_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.700e-28 Identity = 67/157 (42.68%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 4 TKDLVRDAFAQPIQA-TEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAG----QGRSRITNPSSPEYMAAVCTFDTFQEM-VQEKVCSWNQKRRLLRHL-GSFVA 453
T DL+ AF P+ A TE +RFTF++GGGK R +Y L ++++AALRE+GF EDR+A ++CQG+YK Q DT + T+QVFP++ L G G + + + SPEY+ +TFQ M V K SW QK+R L+ L GS A
Sbjct: 30 THDLIVAAFGTPLTAPTEMIRFTFIVGGGKLV-RARYSEQLPKWMTAALREVGFVEDRSAACTLDCQGTYKQQKDTGANLLTIQVFPRLTLAV-----GTGGEDLEDKPATVDVDSPEYLCISSDLETFQRMIVPAKARSWVQKKRFLKALQGSMTA 180
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A7S4D4I3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4I3_HETAK) HSP 1 Score: 115 bits (287), Expect = 1.120e-27 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 13 LVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKID--LVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEMVQEKVCSWNQKRRLLRHLGSFV 450
L+ AF P+ AT+ ++ TF++G GK RQKYD++L +++ AALR +GF+ED+ A+ +++C G+YKSQHDT K I T+ +FP ++ EE S + MA + D F M+ K +W+QK+RL++ L F+
Sbjct: 36 LISAAFGAPLPATDMVKITFVVGAGKLA-RQKYDANLQKWVCAALRNLGFQEDKGASCMIDCAGTYKSQHDTGKNIMTVIIFPNVEGPSGEEAKXXXXXXXXXXXXXXXSAQEMAVTASMDMFPRMIASKCPAWSQKKRLVKILQDFI 182
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Match: A0A6G0X0D3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0D3_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.300e-27 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 7 KDLVRDAFAQPIQA-TEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALREIGFREDRAATALMECQGSYKSQHDTHKGIRTLQVFPKIDLVEEEAENGAGQGRSRITNPSSPEYMAAVCTFDTFQEM-VQEKVCSWNQKRRLLRHL 438
+DLV AF P+ A TE +RFTF++GGGK R +Y L +++++ALR+IGF EDR+A ++CQG+YK Q DT + T+QVFP++ L + E + R+ + SPEY+ +TFQ M V K SW QK+RLL+ L
Sbjct: 31 RDLVVAAFGTPLTAPTEMIRFTFVVGGGKLV-RARYAEQLPKWMTSALRDIGFAEDRSAACTLDCQGTYKQQKDTGANLLTIQVFPRLALETKGGEIDE-EKRAPPVDIDSPEYLCISSDLETFQRMIVPVKATSWTQKKRLLKAL 174 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14811.3436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14811.3436.1 >prot_E-fasciculatus_F_contig14811.3436.1 ID=prot_E-fasciculatus_F_contig14811.3436.1|Name=mRNA_E-fasciculatus_F_contig14811.3436.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp QTKDLVRDAFAQPIQATEPLRFTFLIGGGKTQNRQKYDSDLGRYLSAALRback to top mRNA from alignment at E-fasciculatus_F_contig14811:498..3110+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14811.3436.1 ID=mRNA_E-fasciculatus_F_contig14811.3436.1|Name=mRNA_E-fasciculatus_F_contig14811.3436.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2613bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14811:498..3110+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14811:498..3110+ >mRNA_E-fasciculatus_F_contig14811.3436.1 ID=mRNA_E-fasciculatus_F_contig14811.3436.1|Name=mRNA_E-fasciculatus_F_contig14811.3436.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14811:498..3110+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |