mRNA_E-fasciculatus_F_contig14810.3435.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14810.3435.1
Unique NamemRNA_E-fasciculatus_F_contig14810.3435.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 9.220e-78
Identity = 128/173 (73.99%), Postives = 143/173 (82.66%), Query Frame = 1
Query:   55 ANNHFEAVEELLAAGANYAMRAEINYSPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            AN+H EAV+ELLAAGANY++R   + SPLEIAA RG ADVV  LLDKDS EVDAT+G GWAALH AA+++GPV DNGD VRVLL AGADV  K T + C T L+ AVNRRIASDGTIRALLEGGANI+AR G D+TPLH AC RSS  GVELLLRWGAD+KLT+NVGQTPA V
Sbjct:  182 ANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHV 354          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.970e-69
Identity = 113/159 (71.07%), Postives = 130/159 (81.76%), Query Frame = 1
Query:  100 ANYAMRAE-INYSPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            ANY +R E    SPLEIAA  G+ADV+  LLDKDSS++D T+G GWAALH AA V+GPV DNGD VRVLLGAGADV+    N++CFTPLH AVN R  SDGT+RALLEGG+NIHARA  D+TPLH ACK +SV GVELLLRWGADEKLT+NVG+TPA+V
Sbjct:   73 ANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADV 231          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.840e-53
Identity = 98/147 (66.67%), Postives = 112/147 (76.19%), Query Frame = 1
Query:  133 SPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            SPLEIAA RG+ADV+  LLDK SSEVD  N  GWAALH  A+ +  V D GD VRVLLGAGADV++K TN++C TPLH AVNR + S GTI ALLEGGANI+AR   D+TPLH AC R   + VELLLRWGADEKL +N G TPA+V
Sbjct:  247 SPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADV 393          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 4.040e-47
Identity = 84/125 (67.20%), Postives = 102/125 (81.60%), Query Frame = 1
Query:  199 SSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            +S+V+ATN  G AALH AA+V GPV D GD VRVLLGAG DV++  T ++CFTPLH AV+ RIASDGTIRALLEG A++ +RA  D+TPLH ACK +SV+GVELLLRWGADE+LT+N G  PA+V
Sbjct:   32 NSDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADV 155          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 7.400e-46
Identity = 95/176 (53.98%), Postives = 118/176 (67.05%), Query Frame = 1
Query:   55 ANNHFEAVEELLAAGANYAMRAEI---NYSPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            ANNH EAV+ELLAAGAN  +R  +   ++S L++AA RG+ADV+  LLDKD+             +  A +V+GPV DNGD VR LLG GADV+ K T+  C +PLH AV+RRIASDG I              G D  PLH AC+ SSV+GVELLLRWGADEKLT++VG+TPA+V
Sbjct:  192 ANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADV 354          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: D8LQL7_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL7_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.800e-45
Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 1
Query:  184 LLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETC-FTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            LLDKDSSE+DATN  G AALH AA+ +GPVG+NGD + VLLGAGADV++KAT   C FTPLH AV+   AS+GTI ALLEGG +++AR   + TPLHTA + +SV+ VELLLRWGADEKL +N G TPA+V
Sbjct:  202 LLDKDSSELDATNDFGRAALHYAASFDGPVGNNGDAILVLLGAGADVNVKATTAVCCFTPLHVAVSHWKASNGTICALLEGGGHVNARTQHNNTPLHTAYECASVSVVELLLRWGADEKLANNDGDTPADV 332          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.690e-45
Identity = 85/125 (68.00%), Postives = 93/125 (74.40%), Query Frame = 1
Query:  199 SSEVDATNGNGWAALHCAAA-VNGPVGDNGDVVRVLLGAGADVDLKATNE-TCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPA 567
            SSEV AT+  G+ ALHC    +N PV DNGD VRVLL AGADVD K T +  C TPLH AVNRRIA  G IRALLEGGAN++AR   D+TPLH AC RSSVNGVE LL WGADEKLT   G+TPA
Sbjct:    9 SSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPA 133          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.810e-44
Identity = 91/157 (57.96%), Postives = 103/157 (65.61%), Query Frame = 1
Query:  103 NYAMRAEINYSPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            N+ M +    SPLE+AA  G+ +V                    AALHCAA     V DNGD VR LLGAGADV+++ATN  CFTPLH A   RIASDGTIRALLEGGANI+A    DETPLH AC   SV GVELLL WGADEKLT++VG TPA+V
Sbjct:  156 NHRMLSNNTRSPLEVAANGGHGNV--------------------AALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACT-EDETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADV 291          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: D7G6Z8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z8_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 3.340e-41
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   28 GQTPLFRAAANNHFEAVEELLAAGANYAMRAEINYSPLEIAATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV 573
            G TPL +          +E L AGA+       +Y P +IAA RG+A+++   L+   +EV A +GNGW ALH AA+   P  DN   +RVLL AG +V+ KAT  + +TPLH  V+ R+AS G + ALLEGGA+++ARA RD+TPLH A  RS+V  VELLLR G DEKLT++ G TPA+V
Sbjct:   81 GTTPLVQRGRKQPPRCRQEALTAGADSRRPTLGHYFPFDIAARRGHANILKAFLET-GTEVVAADGNGWTALHGAAS-GIPSLDNRGTIRVLLEAGVNVNAKATCRSLYTPLHLTVDYRVASVGMVGALLEGGADVNARAERDQTPLHVAGGRSNVAAVELLLRCGVDEKLTNDDGDTPADV 260          
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.040e-32
Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 1
Query:  154 TRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRVLLGAGADVDLKA---TNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAGRDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAE 570
            +RG A ++   LDKDS EVDAT+G GW ALH AA V+  V DNGD VR LL AGADV++K     ++  FTPLH AVNRR+AS   I                ++TPLH AC   +V+GVELLLRWGADE L ++   TPA+
Sbjct:  254 SRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPAD 395          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14810.3435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L812_9PHAE9.220e-7873.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI9_ECTSI1.970e-6971.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQN0_ECTSI1.840e-5366.67Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5JXF0_9PHAE4.040e-4767.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7E1_9PHAE7.400e-4653.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQL7_ECTSI2.800e-4565.65Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
A0A6H5K6K9_9PHAE6.690e-4568.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHD6_9PHAE1.810e-4457.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Z8_ECTSI3.340e-4148.90Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7FZ92_ECTSI1.040e-3251.41Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14810contigE-fasciculatus_F_contig14810:2629..3201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue1.1e-56
Seed eggNOG ortholog2880.D8LQI9
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons1
Model size573
Cds size573
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927963.8053432-CDS-E-fasciculatus_F_contig14810:2628..32011622927963.8053432-CDS-E-fasciculatus_F_contig14810:2628..3201Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14810 2629..3201 -
1695995769.6119936-CDS-E-fasciculatus_F_contig14810:2628..32011695995769.6119936-CDS-E-fasciculatus_F_contig14810:2628..3201Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14810 2629..3201 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14810.3435.1prot_E-fasciculatus_F_contig14810.3435.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14810 2629..3201 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14810.3435.1

>prot_E-fasciculatus_F_contig14810.3435.1 ID=prot_E-fasciculatus_F_contig14810.3435.1|Name=mRNA_E-fasciculatus_F_contig14810.3435.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp
ANKDAVDRYGQTPLFRAAANNHFEAVEELLAAGANYAMRAEINYSPLEIA
ATRGYADVVMFLLDKDSSEVDATNGNGWAALHCAAAVNGPVGDNGDVVRV
LLGAGADVDLKATNETCFTPLHSAVNRRIASDGTIRALLEGGANIHARAG
RDETPLHTACKRSSVNGVELLLRWGADEKLTSNVGQTPAEV
back to top

mRNA from alignment at E-fasciculatus_F_contig14810:2629..3201-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14810.3435.1 ID=mRNA_E-fasciculatus_F_contig14810.3435.1|Name=mRNA_E-fasciculatus_F_contig14810.3435.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=573bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14810:2629..3201- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCAAACAAGGATGCGGTTGACCGTTACGGTCAAACGCCACTGTTCAGGGC GGCAGCGAACAACCACTTCGAGGCTGTTGAAGAGCTGCTAGCTGCTGGTG CCAACTATGCCATGCGCGCCGAAATAAACTATTCTCCACTCGAGATTGCT GCAACCAGAGGTTACGCGGACGTCGTAATGTTCTTGCTTGACAAAGACAG CAGTGAAGTCGACGCCACCAATGGCAACGGATGGGCAGCCCTACACTGTG CTGCAGCTGTTAATGGACCTGTCGGTGACAACGGCGACGTTGTGCGTGTA CTGTTGGGAGCTGGGGCTGATGTCGACTTGAAGGCCACCAACGAAACCTG CTTTACGCCGCTCCATTCTGCCGTTAATCGCCGGATAGCATCGGACGGCA CGATTCGCGCCCTGTTGGAGGGAGGGGCGAATATCCATGCGCGCGCTGGA CGAGATGAGACACCGCTGCACACAGCTTGCAAGCGTTCGAGTGTTAACGG TGTGGAACTTCTTCTGCGTTGGGGAGCAGATGAGAAGCTCACGAGCAACG TTGGACAGACGCCCGCAGAGGTG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14810:2629..3201-

>mRNA_E-fasciculatus_F_contig14810.3435.1 ID=mRNA_E-fasciculatus_F_contig14810.3435.1|Name=mRNA_E-fasciculatus_F_contig14810.3435.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14810:2629..3201- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCAAACAAGGATGCGGTTGACCGTTACGGTCAAACGCCACTGTTCAGGGC
GGCAGCGAACAACCACTTCGAGGCTGTTGAAGAGCTGCTAGCTGCTGGTG
CCAACTATGCCATGCGCGCCGAAATAAACTATTCTCCACTCGAGATTGCT
GCAACCAGAGGTTACGCGGACGTCGTAATGTTCTTGCTTGACAAAGACAG
CAGTGAAGTCGACGCCACCAATGGCAACGGATGGGCAGCCCTACACTGTG
CTGCAGCTGTTAATGGACCTGTCGGTGACAACGGCGACGTTGTGCGTGTA
CTGTTGGGAGCTGGGGCTGATGTCGACTTGAAGGCCACCAACGAAACCTG
CTTTACGCCGCTCCATTCTGCCGTTAATCGCCGGATAGCATCGGACGGCA
CGATTCGCGCCCTGTTGGAGGGAGGGGCGAATATCCATGCGCGCGCTGGA
CGAGATGAGACACCGCTGCACACAGCTTGCAAGCGTTCGAGTGTTAACGG
TGTGGAACTTCTTCTGCGTTGGGGAGCAGATGAGAAGCTCACGAGCAACG
TTGGACAGACGCCCGCAGAGGTGGCAAACAAGGATGCGGTTGACCGTTAC
GGTCAAACGCCACTGTTCAGGGCGGCAGCGAACAACCACTTCGAGGCTGT
TGAAGAGCTGCTAGCTGCTGGTGCCAACTATGCCATGCGCGCCGAAATAA
ACTATTCTCCACTCGAGATTGCTGCAACCAGAGGTTACGCGGACGTCGTA
ATGTTCTTGCTTGACAAAGACAGCAGTGAAGTCGACGCCACCAATGGCAA
CGGATGGGCAGCCCTACACTGTGCTGCAGCTGTTAATGGACCTGTCGGTG
ACAACGGCGACGTTGTGCGTGTACTGTTGGGAGCTGGGGCTGATGTCGAC
TTGAAGGCCACCAACGAAACCTGCTTTACGCCGCTCCATTCTGCCGTTAA
TCGCCGGATAGCATCGGACGGCACGATTCGCGCCCTGTTGGAGGGAGGGG
CGAATATCCATGCGCGCGCTGGACGAGATGAGACACCGCTGCACACAGCT
TGCAAGCGTTCGAGTGTTAACGGTGTGGAACTTCTTCTGCGTTGGGGAGC
AGATGAGAAGCTCACGAGCAACGTTGGACAGACGCCCGCAGAGGTG
back to top