mRNA_E-fasciculatus_F_contig1481.3434.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: D8LNP3_ECTSI (ARL2_Bind_BART domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP3_ECTSI) HSP 1 Score: 350 bits (897), Expect = 5.470e-119 Identity = 180/189 (95.24%), Postives = 182/189 (96.30%), Query Frame = 1
Query: 1 MPKRDSHGDEGESKGQGGGEDDLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRQLGQESKPTSGSEGKESDSAPRGGVPSTGEEKYSEDDRRPSGERSYK 567
MPKRDSHGDEGESKGQGGGE+DLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMA GKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFY VIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKR LGQESKPT+GSEGKE DS PRGGVPSTGE KYSEDDRR SGERSYK
Sbjct: 1 MPKRDSHGDEGESKGQGGGEEDLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMADGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYNVIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRHLGQESKPTAGSEGKEPDSVPRGGVPSTGEGKYSEDDRRHSGERSYK 189
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A835ZDD4_9STRA (ARL2_Bind_BART domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD4_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.460e-47 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 28 EGESKGQGGGEDDLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSL 414
E +S GG E LL +AIK+CWS+NFLDVFRAYFRKHA FE +A K+EEH L +QELF EYL IFEG LE+FIEREG+T +FY IRD Q++ DP +QLFI CLLASADYDSFFNVM KE+ + L
Sbjct: 5 EEKSSSNGGEEKGLLQRAIKYCWSNNFLDVFRAYFRKHAHHFERIAEEKTEEHDLVFQELFQEYLGIFEGTLEDFIEREGATQEQFYAAIRDAQSSTDPSIQLFIRCLLASADYDSFFNVMVKESRRQL 133
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A7R9YCX8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX8_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.950e-28 Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 67 LLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRDHQ-TNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRQL 432
L+ KA+ +CWS +FLDVFR+YFRKHA VF A GK+EEH LE+QELF EYL ++E LE+F+ ++ + Y + Q T P V +F++CLLAS DY+SF VM +EA + R+ R +
Sbjct: 58 LIRKAMAYCWSSSFLDVFRSYFRKHAGVFSDFAEGKTEEHDLEFQELFREYLDLYESTLEDFLRDADASSQDLYRDVAALQGTKMAPDVAIFVDCLLASMDYESFLKVMTREARQQSRQARSI 180
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A7S2UYU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYU1_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.580e-26 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 1
Query: 1 MPKRDSHGDEGESKGQGGG--------EDDLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYT-VIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSL 414
M K+D + ESKG G E L K +K+CW + FLDVFR YF++HA F A G++EEH L +QELF +YL ++E L +F+ +EG + EFY V +T DP + FI+CLLAS DY+SFF VM + A+ L
Sbjct: 32 MKKQDDSDYKSESKGAKGXXXXXXXXXEGGALEKVMKYCWDNEFLDVFRNYFKEHAYHFTEYAEGRTEEHDLAWQELFEDYLKLYEDTLSDFLRQEGYSDKEFYAEVAAAKETATDPATKQFIHCLLASCDYNSFFRVMVQMAKTEL 178
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A7S2AWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWK6_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.700e-23 Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 67 LLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMAAGK-SEEHALEYQELFNEYLLIFEGKLEEFIERE-GSTINEFYTVIRDHQT-------NPDPQVQLFINCLLASADYDSFFNVMKKEAEK 408
LL++A+ +CWS+ FLDVFR YFR HA F M G S EH+LE +F EYL ++E +L E+IE + G + EFY + D + + D LFI CL+ASADYDSF+ VM +EA+K
Sbjct: 27 LLSQALTYCWSNEFLDVFRQYFRDHASDFRGMKVGMGSSEHSLEQHAVFQEYLQLYEDRLSEYIESQLGGSSKEFYEELADAKDVQARDPESCDAGTALFIECLVASADYDSFYKVMVREAQK 149
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A7S2HVG4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVG4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.630e-18 Identity = 52/128 (40.62%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 67 LLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMA-----AGK----SEEHALEYQELFNEYLLIFEGKLEEFIERE----GSTINEFYTVIRDHQTNP--DPQVQLFINCLLASADYDSFFNVMKKEAE 405
+L A+KHCW++NFL VFR +F+ HA F M G+ + H+ + E F EYL ++E +L ++IE G+T+ EFY ++ Q D Q+FI+CL+ASADYDSF++VM +EA+
Sbjct: 34 ILESALKHCWTNNFLGVFRQFFKDHAAHFRGMKRKDPLTGEWSLDTGTHSHQQHEDFEEYLKLYESQLADYIENHPDGPGATVTEFYRELKAAQECDFADEGTQMFIDCLVASADYDSFYSVMVREAD 161
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A7S0ST95_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0ST95_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.180e-13 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 85 KHCWSDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRD--HQTN-PDPQVQLFINCLLASADYDSFFNVMKKEAEK 408
+HCWS+NF++ F+ + H +F SEE LEY ELF YL ++E L ++I T+ EFY + D + TN D ++ F+N L+A DY SF+ +M + A K
Sbjct: 1 RHCWSNNFMNSFKDFINDHCILFINAPTTPSEEQNLEYYELFQRYLKLYETILSDYINSLDCTVEEFYEQLADILNDTNIKDKKLLHFVNYLIACTDYPSFYKIMTRAARK 111
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A0P1A8G8_PLAHL (Cilia- and flagella-associated protein 36 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8G8_PLAHL) HSP 1 Score: 75.9 bits (185), Expect = 6.800e-13 Identity = 43/125 (34.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 58 EDDLLAKAIKHCW-SDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRD-HQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKR 426
E DL+ K I + + +D+F F + +H VF++ S+E LEY +++N++L +FE KLE +I+ +G+T++EFY ++R ++ + + L L+A+AD+D F +M++ E SL +KR
Sbjct: 46 ESDLVDKVITYFFENDDFAHSFETFAERHCHVFDL----NSDEMKLEYTDIYNKFLALFETKLEAYIQSQGATVHEFYNLVRHAYKVDRESGTVLCSEILVATADFDVFVQMMRQTKETSLLRKR 166
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A5D6XLI6_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLI6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.040e-12 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 64 DLLAKAIKHCWSDNFLDVFRAYFRKHAEVF--EVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFY----TVIRDHQTN--PDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRK 420
D++ +A +C S F +F + R+HAE F + A G EH EY+E+ ++YL +FE +L +F+E EGSTI+EF+ V+ T + + F+ LLAS +Y+ FF++M EA + RK
Sbjct: 5 DVIERAAIYCSSTKFERIFDDFAREHAETFLDALDAKGGDVEHKHEYKEIHDKYLRLFEEELSDFVESEGSTIDEFFRECRAVVNAKVTGYFDEHKYVWFVEHLLASMEYELFFSLMINEARRLRRK 131
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Match: A0A024U863_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U863_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 8.170e-12 Identity = 44/143 (30.77%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 7 KRDSHGDEGESKGQGGGEDD--------LLAKAIKHCW-SDNFLDVFRAYFRKHAEVFEVMAAGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYTVIRD-HQTNPDPQVQLFINCLLASADYDSFFNVMKKEAE 405
+RD D ++K G E D ++ + I + +++F VF + KH ++F+V KS+E LEY +++ ++ +FE K+E FIE +GST+++FYT+++ H +P + ++ L+A+ D+D F +MK+ E
Sbjct: 29 RRDDDDDVSDAKRVGANESDAKTDRPPTIVDRVIAFFFENEDFCRVFERFADKHCDIFDV----KSDEMQLEYTDIYKKFTDLFESKIEAFIESQGSTVDDFYTLVKKAHDKDPHGTIAIYSRMLVATTDFDVFVIMMKQAKE 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1481.3434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1481.3434.1 >prot_E-fasciculatus_F_contig1481.3434.1 ID=prot_E-fasciculatus_F_contig1481.3434.1|Name=mRNA_E-fasciculatus_F_contig1481.3434.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=190bp MPKRDSHGDEGESKGQGGGEDDLLAKAIKHCWSDNFLDVFRAYFRKHAEVback to top mRNA from alignment at E-fasciculatus_F_contig1481:9422..12019- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1481.3434.1 ID=mRNA_E-fasciculatus_F_contig1481.3434.1|Name=mRNA_E-fasciculatus_F_contig1481.3434.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2598bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1481:9422..12019- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1481:9422..12019- >mRNA_E-fasciculatus_F_contig1481.3434.1 ID=mRNA_E-fasciculatus_F_contig1481.3434.1|Name=mRNA_E-fasciculatus_F_contig1481.3434.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1140bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1481:9422..12019- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |