mRNA_E-fasciculatus_F_contig14804.3431.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: A0A6H5L8A9_9PHAE (HTTM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8A9_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.300e-31 Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 1
Query: 10 SRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSVDV 210
++QVLRLVLDPDMLLQFAKKTAEINAAA HGQQQ+GKP P SHVDAWKSINGRPFTRWIDPSVDV
Sbjct: 586 AQQVLRLVLDPDMLLQFAKKTAEINAAAEHGQQQKGKPQLPAASHVDAWKSINGRPFTRWIDPSVDV 652
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: A0A8J9VA64_BRALA (GGCX protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VA64_BRALA) HSP 1 Score: 56.6 bits (135), Expect = 1.160e-7 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 RVPSRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSVDV 210
++ +RQ+ R++ DP+++LQ+A+ + GH Q P +D W+S+N RPF RW+DPSVD+
Sbjct: 432 QINARQMKRMLTDPELILQYAQ-----HLGRGHLQTTGS----PASVRLDMWRSLNNRPFQRWVDPSVDL 492
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: A0A6P4YJU5_BRABE (vitamin K-dependent gamma-carboxylase-like isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YJU5_BRABE) HSP 1 Score: 56.6 bits (135), Expect = 1.160e-7 Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 10 SRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSVDV 210
+RQ+ R++ DP+M+LQ+A+ G++ P +D W+S+N RPF RW+DPSVD+
Sbjct: 463 ARQMKRMITDPEMILQYAQYL---------GREHMQTTGSPASVRLDMWRSLNNRPFQRWVDPSVDL 520
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: C3YG73_BRAFL (HTTM domain-containing protein n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YG73_BRAFL) HSP 1 Score: 56.2 bits (134), Expect = 1.590e-7 Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 1 RVPSRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSVDV 210
++ +RQ+ R++ DP+++LQ+A+ G++ P +D W+S+N RPF RW+DPSVD+
Sbjct: 428 QINARQMKRMITDPELILQYAQHL---------GREHLETTGSPASVRLDMWRSLNNRPFQRWVDPSVDL 488
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: A0A7S0H7A6_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H7A6_9EUKA) HSP 1 Score: 53.9 bits (128), Expect = 1.040e-6 Identity = 29/73 (39.73%), Postives = 37/73 (50.68%), Query Frame = 1
Query: 1 RVPSRQVLRLVLDPDMLLQFAKKTA---EINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSVDV 210
R+ RQ+ R DPD LQ A+ + A HGQ + D WKS+NGRPF RWIDP+ D+
Sbjct: 497 RIKPRQLRRCFKDPDCHLQLAQWPGIPEMVRGALRHGQ-----------IYFDVWKSLNGRPFQRWIDPTFDL 558
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: A0A1S3JV01_LINUN (Vitamin K-dependent gamma-carboxylase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JV01_LINUN) HSP 1 Score: 53.1 bits (126), Expect = 1.950e-6 Identity = 27/74 (36.49%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 1 RVPSRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPS----HVDAWKSINGRPFTRWIDPSVDV 210
R+ RQV ++ D +++LQ H +Q+ GK P H+D W+S+NGRPF RWIDP D+
Sbjct: 475 RLTDRQVKMMLTDAELILQLVD----------HIKQRPGKDTNLKPGTFGVHIDMWRSLNGRPFQRWIDPETDL 538
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Match: UPI0014259B78 (vitamin K-dependent gamma-carboxylase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259B78) HSP 1 Score: 50.4 bits (119), Expect = 1.740e-5 Identity = 24/64 (37.50%), Postives = 32/64 (50.00%), Query Frame = 1
Query: 13 RQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDAWKSINGRPFTRWIDPSV 204
RQ R++ D D++LQF + G P P + WKS+NGRPF RW+DP V
Sbjct: 448 RQAKRMITDLDLVLQFVNHWTT---------KSPGSPEAPVSIKAELWKSLNGRPFQRWVDPEV 502 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14804.3431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14804.3431.1 >prot_E-fasciculatus_F_contig14804.3431.1 ID=prot_E-fasciculatus_F_contig14804.3431.1|Name=mRNA_E-fasciculatus_F_contig14804.3431.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=70bp RVPSRQVLRLVLDPDMLLQFAKKTAEINAAAGHGQQQRGKPPRPTPSHVDback to top mRNA from alignment at E-fasciculatus_F_contig14804:262..471+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14804.3431.1 ID=mRNA_E-fasciculatus_F_contig14804.3431.1|Name=mRNA_E-fasciculatus_F_contig14804.3431.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=210bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14804:262..471+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14804:262..471+ >mRNA_E-fasciculatus_F_contig14804.3431.1 ID=mRNA_E-fasciculatus_F_contig14804.3431.1|Name=mRNA_E-fasciculatus_F_contig14804.3431.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=420bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14804:262..471+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |