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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-02_000220.1 |
| Exons | 4 |
| Model size | 941 |
| Cds size | 726 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig148.3425.1 >prot_E-fasciculatus_F_contig148.3425.1 ID=prot_E-fasciculatus_F_contig148.3425.1|Name=mRNA_E-fasciculatus_F_contig148.3425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=242bp
MSRCSWRSAEALHKRRAERKRVERADERARERLKREEEEWHITGERAFRP
KERSYPHGGGVDATACKGFLDLAERAMHLYDRGKAQTEEMSAALASLEQK
NAALAQACHGYEDKHSSHLTPDRVKSGKWEVGTKELRLFVEATKRMTPAQ
RHTFTQVLAPHRDKSDGYIGPVEPLAVSLQRARNASIEHAVSGAIFSSGS
PPSSSGGGDGGGGGKSGGVGRFSRGLRAVVVRPPPSAAAST* back to topmRNA from alignment at E-fasciculatus_F_contig148:12092..14698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig148.3425.1 ID=mRNA_E-fasciculatus_F_contig148.3425.1|Name=mRNA_E-fasciculatus_F_contig148.3425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2607bp|location=Sequence derived from alignment at E-fasciculatus_F_contig148:12092..14698+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACACAACGCCTGCAGCGAAAATTTGAGTTCAGCTGCCCGGCTAAACTTT
TTGCCCATCGTTAAACTAGAGATGTAGCCTGCAAGTGGTCCTGAGGAAAA
CCACGATTACAACAGAAGTAGCCGCGCGCAAGTAATTCTGTTCTGTAGGT
GAACACCTTGTTCATCGAGAAAGGTATTCTACACCGACACGGGACCACTC
GTGCAGCACCGACATGTCTCGTTGCTCTTGGCGAAGCGCCGAAGCGCTGC
ACAAGAGGCGGGCCGAACGGAAGAGGGTTGAGCGTGCGGATGAGAGGGCG
CGGGAGAGGCTGAAGCGGGAGGAGGAGGAGTGGCACATCACCGGGGAGCG
GGCCTTCCGACCCAAAGAACGGAGTTACCCGCACGGTGGCGGGGTGGATG
CCACTGCTTGCAAGGGTTTCTTGGACTTGGCCGAGCGAGCGATGCATCTT
TACGACAGGTGGGCAGGTCGAATCGCCCGTGTCTACAGCAGTACATGTAT
GTGCATGGGTACTGAATTTGACCTCGTTGGTTCACAAACTTTGGCGCCGG
CGTCATCCAACCGCCACCTCGTACTCGAGTGGCGAGTATTCGGGATGGAT
CACAACCCCATGCTGATGAACGTTCACTCTGGTCAATGACCCCCGTGTGA
TATGCCGCATGCGTTGAGCGTCCGGGCGCAAGTGTCTGCTGCCTGCCATG
TACGTATATCAATATTCCTTGTGGAATTCGACTCCCCTACTGCCTGGCGA
AAGATTCCCCACTTGCAGGCACGATGTCAGATATGTGGCCCCTCTCTCGC
CACGGGGGCCATTCCCGCCGGGGTTGATTGCTCTAACTGTGCTCAAACCT
GTGTATCAGGCTCAACGCGATGAATGACGATTCAGGGAGGCATCCATTGA
CTACAATATCTTTGATTCTCAATTTCTTTTTCCACAACTTGAGTGTGCAG
GCACTGCACGCTGGAGAAAATCATCCAATATCTAATGTGTTGCTTCGCCA
CTCGCCTTCCTACTTTGATTTACTTTTTTCATCGCTACAGAGGAAAGGCT
CAGACAGAAGAGATGTCGGCGGCGCTTGCTTCGCTCGAGCAAAAGAACGC
GGCACTTGCACAAGCCTGTCATGGATACGAAGACAAGCACTCGTCGCATC
TTACCCCGGACAGAGTGTGCGTTCACTCCCGGCCCACTTCCCTAAAAATG
TGTTTCTCTTTTTGGTGTGTGTGTGTGGTCTTGGATAACAGAGTAACGCT
ATTCTAAGGGGTAAACCAATACTTATTTACTACATTTACTACTGTAGTGT
CTAAAACTTTTGCCATGTTCAAGGTTCCTCATGAACATGCCTTTGGAGCA
CAATCGACCACGTGAAAAAAGCTACCGTTCATCACTCTAAACCCTTAGGA
TTGCTTCCTTTCGTTGCGCATTCACGTTCGTATTATTGCCACACCCTTGG
GTGAGATGCCGATTTCTTCACACCGCTGGGGTGCAGCGAAAACATTTTCT
ACCCCATTGCTTGAGTTCACGTTCCTTGTGTGGCGATGAACACCCCCCGT
GAAGTGAAGGTATTAGATCGTTCCATGCAAGTTTGCCCGGTTCGCATTTC
ACTGCCTGGGCACAACCGGTCGATCTGTCCAGTGCTTTCGTGCCACGCGG
TTCCGCGTTAAAGCTGGGGGTATCCTACTACACATCTCGTTGGTCTGGTA
CGTTCAGGGACTTGCTAACGTTTGGTTCTTTCGCTTCTCCGATATACGCT
TGCTATGGTGTCGACAGGAAGAGCGGAAAGTGGGAGGTTGGCACGAAGGA
ACTGCGGCTCTTTGTGGAAGCCACGAAGAGAATGACTCCTGCACAACGCC
ACACCTTCACCCAAGTCCTCGCCCCACACCGGGTAAGGGTTTCCACGTAC
ACATGGCCATGGTGTGTATGCAAAGGAACTTGCCACGCTAGGGAAATCGG
TATCGGTCCGAATGCAAGGGGAAAAACAGTACAGATGATAGATATCGAGG
CATAGTTGGAAAGAGCGTCGTTTTCATATACTTCTACAATAATCTGCGGG
GAGGAAACTCGAAAAAGTGTCGAAAAGGCGTTCGTCGTCACTACTAGATT
GTGTAGTGTCCCGTTAAATTGTTGCAGGACGTCCGTCGAAGATATCCCTT
CCAGTTTGCACCAGCAAGAAGAATAGGAGTATAGTCTACTCTGCAGAAGT
AGTGGGTCCGAAGGCCATCATGGACTGCATCGTCCTAATGAAAACAAATC
AGTTTTAGTCTTCCAGTCGTAGACAGATGGCGAGTGACGTCCAGAAAAAA
TTCTCGAACGAACGTCAAATTTCATTGGCATCACCCACCCTCTCTGTCTG
GCTCCACCCCCGCAGGACAAGTCTGACGGTTACATCGGCCCCGTGGAGCC
GCTAGCGGTAAGCCTCCAACGAGCGAGGAACGCTTCGATCGAGCATGCGG
TCTCCGGGGCGATTTTTTCTTCCGGGTCGCCACCTTCCTCTTCAGGCGGC
GGCGACGGTGGCGGTGGTGGAAAATCTGGTGGAGTGGGGAGATTTTCGCG
CGGGCTTCGAGCAGTTGTAGTGCGACCGCCTCCAAGCGCTGCGGCTTCAA
CGTAGAC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig148:12092..14698+ >mRNA_E-fasciculatus_F_contig148.3425.1 ID=mRNA_E-fasciculatus_F_contig148.3425.1|Name=mRNA_E-fasciculatus_F_contig148.3425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1452bp|location=Sequence derived from alignment at E-fasciculatus_F_contig148:12092..14698+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCTCGTTGCTCTTGGCGAAGCGCCGAAGCGCTGCACAAGAGGCGGGC
CGAACGGAAGAGGGTTGAGCGTGCGGATGAGAGGGCGCGGGAGAGGCTGA
AGCGGGAGGAGGAGGAGTGGCACATCACCGGGGAGCGGGCCTTCCGACCC
AAAGAACGGAGTTACCCGCACGGTGGCGGGGTGGATGCCACTGCTTGCAA
GGGTTTCTTGGACTTGGCCGAGCGAGCGATGCATCTTTACGACAGATGTC
TCGTTGCTCTTGGCGAAGCGCCGAAGCGCTGCACAAGAGGCGGGCCGAAC
GGAAGAGGGTTGAGCGTGCGGATGAGAGGGCGCGGGAGAGGCTGAAGCGG
GAGGAGGAGGAGTGGCACATCACCGGGGAGCGGGCCTTCCGACCCAAAGA
ACGGAGTTACCCGCACGGTGGCGGGGTGGATGCCACTGCTTGCAAGGGTT
TCTTGGACTTGGCCGAGCGAGCGATGCATCTTTACGACAGAGGAAAGGCT
CAGACAGAAGAGATGTCGGCGGCGCTTGCTTCGCTCGAGCAAAAGAACGC
GGCACTTGCACAAGCCTGTCATGGATACGAAGACAAGCACTCGTCGCATC
TTACCCCGGACAGAGTAGGAAAGGCTCAGACAGAAGAGATGTCGGCGGCG
CTTGCTTCGCTCGAGCAAAAGAACGCGGCACTTGCACAAGCCTGTCATGG
ATACGAAGACAAGCACTCGTCGCATCTTACCCCGGACAGAGTGAAGAGCG
GAAAGTGGGAGGTTGGCACGAAGGAACTGCGGCTCTTTGTGGAAGCCACG
AAGAGAATGACTCCTGCACAACGCCACACCTTCACCCAAGTCCTCGCCCC
ACACCGGGAAGAGCGGAAAGTGGGAGGTTGGCACGAAGGAACTGCGGCTC
TTTGTGGAAGCCACGAAGAGAATGACTCCTGCACAACGCCACACCTTCAC
CCAAGTCCTCGCCCCACACCGGGACAAGTCTGACGGTTACATCGGCCCCG
TGGAGCCGCTAGCGGTAAGCCTCCAACGAGCGAGGAACGCTTCGATCGAG
CATGCGGTCTCCGGGGCGATTTTTTCTTCCGGGTCGCCACCTTCCTCTTC
AGGCGGCGGCGACGGTGGCGGTGGTGGAAAATCTGGTGGAGTGGGGAGAT
TTTCGCGCGGGCTTCGAGCAGTTGTAGTGCGACCGCCTCCAAGCGCTGCG
GCTTCAACGTAGGACAAGTCTGACGGTTACATCGGCCCCGTGGAGCCGCT
AGCGGTAAGCCTCCAACGAGCGAGGAACGCTTCGATCGAGCATGCGGTCT
CCGGGGCGATTTTTTCTTCCGGGTCGCCACCTTCCTCTTCAGGCGGCGGC
GACGGTGGCGGTGGTGGAAAATCTGGTGGAGTGGGGAGATTTTCGCGCGG
GCTTCGAGCAGTTGTAGTGCGACCGCCTCCAAGCGCTGCGGCTTCAACGT
AG back to top
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