mRNA_E-fasciculatus_F_contig148.3424.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig148.3424.1 vs. uniprot
Match: D7G7G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G9_ECTSI) HSP 1 Score: 848 bits (2191), Expect = 1.600e-303 Identity = 449/512 (87.70%), Postives = 464/512 (90.62%), Query Frame = 1
Query: 43 MLDSQSLEPRLESVLSSVNPPSEDAAYQVVDAVTTAAIWRSHQVVLEKISRACGAKQTTLGLVRLMAMTNEFLDRDHPDGGPNTASLEGDEPVPCQIDVRARGRVGTHCFSLTQPDGDGFSDDTMSDGDMSCVSTSGGSVTGERSFTNKRLSRRAEGSGSFETLADLPLPAALNIKKGIGANRGRSLSRHGSGMMTTPRSTPRSEGPSTARSLASSTKSSVHPAMGRLFDMADRRDVGWLNVFLEYHGHKQWANPAFIRANLVTLGISKGGNEPINRHHFMRFLLFLMQKDPLMEFAARPIPPDKWSVGVPEQARELAEILKEVASRSRTKPVAARRRLNRALTSQQVLGQPNAPAAQVSTAAGGEDGATGDKFAKGLDRSSHQVSPQVNVRDRVGYRRPSTSPAWVGEFSQRHHQQQPQKGGKRGRLSGGXXXXXXXGVAKGLEAFLHLDYTVQASLVETVTNVRPGVTVQEMGVPEEEGVDGSGEPEVVRMKAGPADLQIPGRLSRSAYK 1578
MLDSQSL PRLESV+SSVNPPSEDAAYQVVDAVTTAAIWRSHQ VLEKISRACGA+QTTLGLVRLMAMTNEFLDRDHPDGGPNTASLEGDEPVPC IDVRARGRVGT+C++LTQPDGDGFSDDT+SDGD SCVSTSGG+VTGERS TNKR SR EGSGSFETLADLPLPAA+NIKKGI NRGRS+SRHGSGMMTTP S EGPSTARS ASS KS VHPAM LFDMADRRDVGWLNVFLEYHGHKQWANPAFIRA LVTL ISKGGNEPINRHHF+RFLLFLM+KDPLMEFAARPIPPDKWS+GVPEQARELAEILKE+ASRSRTKPVAARRRLNRALTS+QVLGQ NAPAAQVSTAAGGEDGATGD FAKGLDRSSHQVSPQVNVRD VGYRRPSTSPA VG SQ KGGKRGRLSGG GV KGL AFLHLDYTVQASLVETV NVRPGVTVQEMG PEE GVDGSGEPEV+RMKAGPADLQIPGRLSRSAYK
Sbjct: 1 MLDSQSLVPRLESVVSSVNPPSEDAAYQVVDAVTTAAIWRSHQAVLEKISRACGAQQTTLGLVRLMAMTNEFLDRDHPDGGPNTASLEGDEPVPCHIDVRARGRVGTNCWTLTQPDGDGFSDDTISDGDASCVSTSGGTVTGERSSTNKRQSRGVEGSGSFETLADLPLPAAINIKKGI--NRGRSMSRHGSGMMTTPTS----EGPSTARSQASSAKSVVHPAMAMLFDMADRRDVGWLNVFLEYHGHKQWANPAFIRATLVTLDISKGGNEPINRHHFVRFLLFLMRKDPLMEFAARPIPPDKWSIGVPEQARELAEILKEIASRSRTKPVAARRRLNRALTSKQVLGQQNAPAAQVSTAAGGEDGATGDAFAKGLDRSSHQVSPQVNVRDCVGYRRPSTSPAGVGASSQXXXXXXXXKGGKRGRLSGGEGGG---GVEKGLGAFLHLDYTVQASLVETVANVRPGVTVQEMGFPEEGGVDGSGEPEVIRMKAGPADLQIPGRLSRSAYK 503 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig148.3424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig148.3424.1 >prot_E-fasciculatus_F_contig148.3424.1 ID=prot_E-fasciculatus_F_contig148.3424.1|Name=mRNA_E-fasciculatus_F_contig148.3424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=730bp MPPRMNRRGSAALTMLDSQSLEPRLESVLSSVNPPSEDAAYQVVDAVTTAback to top mRNA from alignment at E-fasciculatus_F_contig148:1843..11210- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig148.3424.1 ID=mRNA_E-fasciculatus_F_contig148.3424.1|Name=mRNA_E-fasciculatus_F_contig148.3424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9368bp|location=Sequence derived from alignment at E-fasciculatus_F_contig148:1843..11210- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig148:1843..11210- >mRNA_E-fasciculatus_F_contig148.3424.1 ID=mRNA_E-fasciculatus_F_contig148.3424.1|Name=mRNA_E-fasciculatus_F_contig148.3424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4380bp|location=Sequence derived from alignment at E-fasciculatus_F_contig148:1843..11210- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |