mRNA_E-fasciculatus_F_contig14787.3418.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14787.3418.1
Unique NamemRNA_E-fasciculatus_F_contig14787.3418.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 2.890e-122
Identity = 188/192 (97.92%), Postives = 190/192 (98.96%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            + RNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQF LSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFV+GLLNSDMDLNTFKLHLRDFLVTLK
Sbjct:  555 YHRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFKLSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVSGLLNSDMDLNTFKLHLRDFLVTLK 746
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 8.880e-108
Identity = 185/240 (77.08%), Postives = 187/240 (77.92%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            + RNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFG+LFEIPPEHQKLVVDSVVWAFKHTE    ETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ                                                SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK
Sbjct:  661 YHRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGSLFEIPPEHQKLVVDSVVWAFKHTE---PETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQDILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDAAQHPGVTSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 897
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.600e-80
Identity = 131/240 (54.58%), Postives = 159/240 (66.25%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            ++RNI GARDP+VL+LF+ A+  L   +  +VPRIMEAVFECTL MIT+NF DFPEHR  FF+FLKAVN+HCF  LF IPP HQKLVVDSV+WAFKHTERN+AETGLEIL+ELL NVGRTP VAQGFY+ FLL LIQ                                                +N +++ + V N+L++SFPNLT++QV  FV GL N +MDL +FK HLRDFL+ LK
Sbjct:   19 YRRNIKGARDPQVLTLFSVAVHHLKGCIDPHVPRIMEAVFECTLEMITQNFLDFPEHRTNFFQFLKAVNSHCFQALFSIPPAHQKLVVDSVIWAFKHTERNVAETGLEILHELLQNVGRTPEVAQGFYQSFLLVLIQDILAVMTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFDVAQFPSNKTNHEFLREHVANMLISSFPNLTRSQVLQFVVGLFNVNMDLQSFKTHLRDFLIQLK 258
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S0BW11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW11_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.290e-78
Identity = 136/240 (56.67%), Postives = 160/240 (66.67%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNIAGARDPEVL+LF   ++KL   V   VPRIMEA+FECTL MIT NFEDFPEHR++FF FL+AVN+ CF  LF IP EHQKLVVDSVVWA KHTERNI+ETGLEIL+ELL+NVGRTP VAQGFY+QFLL+LIQ                                                +N  ++ D + NLL+TSFPNLTK+QV+ FV G+ +  MDL TFK HLRDFL+ LK
Sbjct:  262 YQRNIAGARDPEVLALFTTVVDKLQSHVVNAVPRIMEAIFECTLQMITANFEDFPEHRIRFFEFLRAVNSQCFPALFNIPSEHQKLVVDSVVWAMKHTERNISETGLEILHELLLNVGRTPNVAQGFYQQFLLALIQDVFAVLTDRLHKSGFKMHATLLRVMFHLVQMNQVTMPLFDPATAAPGQTNSVFLRDHISNLLVTSFPNLTKSQVSKFVEGMCDLRMDLPTFKTHLRDFLIQLK 501
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 261 bits (668), Expect = 3.260e-78
Identity = 140/236 (59.32%), Postives = 165/236 (69.92%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQS-------------------------------------------NRQYVMDFVGNLLLTSFP-NLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNIAGARDPEVLSLFA AI  L + +  +V RIMEAVFECTL+MIT+N EDFPEHR+KFF+FLKAVNTHCFG+LFEIPP HQKLVVD+VVWAFKHTERNIAETGL+IL ELL NVGR PAVAQGFY+Q+LLSLIQ                                            N+Q++ ++V ++LL SFP NLT+A    FV GL +  M+LN FK HLRDFL+T+K
Sbjct:  767 YQRNIAGARDPEVLSLFATAISVLKEQMAPFVARIMEAVFECTLMMITQNMEDFPEHRIKFFQFLKAVNTHCFGSLFEIPPAHQKLVVDAVVWAFKHTERNIAETGLDILLELLQNVGRAPAVAQGFYQQYLLSLIQDILAVMTDMLHKSCFKAHATLLRHMFHLTQAGQVCRPLPPGAEGNKQFLAEYVCDMLLQSFPQNLTRANAVEFVRGLFDERMELNAFKQHLRDFLITIK 1002
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S2R061_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R061_9STRA)

HSP 1 Score: 252 bits (644), Expect = 5.050e-76
Identity = 135/240 (56.25%), Postives = 158/240 (65.83%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNIAGARDPEVLSLF   +EKL   V   VPRIMEAVFECTL MIT NFED+PEHR+ F+ FL+AVN HCF  LF IPP HQKLV+DSVVWA KHTERNI++TGL+IL+ELL+NVGRTP +AQGFY+Q+LL+LIQ                                                SN  ++   + NLL+ SFPNLTK+QVAVFV GL +  MDL TFK HLRDFL+ LK
Sbjct:  530 YQRNIAGARDPEVLSLFMTVVEKLKGHVIDDVPRIMEAVFECTLQMITTNFEDYPEHRISFYEFLRAVNLHCFPALFNIPPAHQKLVIDSVVWAMKHTERNISDTGLDILHELLLNVGRTPHIAQGFYQQYLLALIQDVFAVMTDRLHKSGFKMHSTLLRHMFHLVQMNQVTVPLYDPASAPAGQSNPSFLRGHISNLLIASFPNLTKSQVAVFVEGLFDLKMDLPTFKAHLRDFLIQLK 769
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S1D775_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D775_CYCTE)

HSP 1 Score: 241 bits (616), Expect = 1.160e-75
Identity = 129/240 (53.75%), Postives = 155/240 (64.58%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNIAGARDPEVL LF   I KL   VQ  VPR+MEAVFECTL MIT NFED+PEHR++FF FLK++N +CF  LF IP EHQKLVVDSVVWA KHTERNIA+TGL+IL EL+ NV +TP VAQGFY+QFLLSLIQ                                                +N  ++ D + NLL+TSFPNLT++QV+ FV G+ +  +DL +FK H RDFL+ LK
Sbjct:  124 YQRNIAGARDPEVLHLFTTVITKLRQNVQNDVPRVMEAVFECTLQMITTNFEDYPEHRIRFFEFLKSINQYCFPALFNIPAEHQKLVVDSVVWAMKHTERNIADTGLDILNELIQNVSKTPNVAQGFYQQFLLSLIQDVFAVMTDRLHKTGFRMQATLLRTMFHLVVNNDVTVPLFDPSTAAPGQTNHVFLRDHISNLLITSFPNLTRSQVSSFVDGMFDPKLDLPSFKTHCRDFLIQLK 363
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S1YZH3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV)

HSP 1 Score: 250 bits (638), Expect = 7.830e-74
Identity = 133/240 (55.42%), Postives = 160/240 (66.67%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            ++RNIAGARDPEVL+LF   +EKL   V   +PRIMEAVFE TL MIT NFED+PEHR++FF+FLKA+N HCF  LF IPPEHQKLV+DSVVWA KHTERNIA+TGLEIL+ELL+NVGRTP +AQGFY+Q+LL+LIQ                                                SN  ++ + + NLLLTSFPNLT++QV  FV G+ +  MDL TFK HLRDFL+ LK
Sbjct:  816 YKRNIAGARDPEVLTLFTTVVEKLKGHVLNDIPRIMEAVFEPTLQMITANFEDYPEHRIRFFQFLKAINQHCFPALFNIPPEHQKLVIDSVVWAMKHTERNIADTGLEILHELLLNVGRTPNIAQGFYQQYLLTLIQDVFAVMTDRLHKSGFKMHATLLRHMFHLVQMNQVTVPLFDPSSAPPGQSNPAFLREHISNLLLTSFPNLTRSQVLKFVDGMFDLKMDLPTFKTHLRDFLIQLK 1055
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S3Q1F7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1F7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.840e-73
Identity = 131/240 (54.58%), Postives = 158/240 (65.83%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNIAGARDPEVL LF   +EKL   V   VPRIME++FECTL MIT NFEDFPEHR++F+ FL+AVN HCF  LF IPP HQKLV+D+VVWA KHTERNIA+TGLEIL+ELL+NVGRTP +AQGFY+Q+LL+LIQ                                                SN  ++ + + NLL+TSFPN+TK QV  FV G+ +  MDL TFK+HLRDFL+ LK
Sbjct:  799 YQRNIAGARDPEVLLLFTTVVEKLKSHVVDDVPRIMESIFECTLQMITTNFEDFPEHRIRFYEFLRAVNQHCFPALFNIPPTHQKLVIDAVVWAIKHTERNIADTGLEILHELLLNVGRTPDIAQGFYQQYLLALIQDVFAVLTDRLHKSGFKMHSTLLRHMFHLVQMNQVTVPLFDPATTPAGQSNPVFLRNHMSNLLITSFPNVTKTQVGTFVDGMFDLKMDLPTFKVHLRDFLIQLK 1038
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BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Match: A0A7S2P7R7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7R7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 8.420e-73
Identity = 124/240 (51.67%), Postives = 153/240 (63.75%), Query Frame = 1 
Query:    1 FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRNFEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK 576
            +QRNI  ARDPEVL LF   +EKL   V   VP+IM AVFECTL MIT NFEDFPEHR++FF F++A+NTHCF  LF IP  HQKLVVDSVVWA KHTERNI++TGL IL+ELL NV +TP +AQGFY+Q+LL+LIQ                                                +N  ++ + + NLL+ SFPNLTK+QV+ FV G+ + +MDL +FK HLRDFL+ LK
Sbjct:   75 YQRNIPNARDPEVLVLFTTVVEKLKSHVLSEVPKIMAAVFECTLQMITVNFEDFPEHRIRFFEFIRAINTHCFQALFNIPSGHQKLVVDSVVWAMKHTERNISDTGLNILHELLNNVAKTPDIAQGFYQQYLLALIQDVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPANAPAGQTNPSFLREHISNLLIQSFPNLTKSQVSKFVDGMFDLNMDLPSFKTHLRDFLIQLK 314
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14787.3418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS67_ECTSI2.890e-12297.92CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK2_9PHAE8.880e-10877.08CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6U1LIT5_9STRA2.600e-8054.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0BW11_9STRA1.290e-7856.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A835YZ33_9STRA3.260e-7859.32Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S2R061_9STRA5.050e-7656.25Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S1D775_CYCTE1.160e-7553.75Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1YZH3_TRICV7.830e-7455.42Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3Q1F7_9STRA1.840e-7354.58Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2P7R7_9STRA8.420e-7351.67Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14787contigE-fasciculatus_F_contig14787:505..3092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.8
Seed ortholog evalue2.4e-101
Seed eggNOG ortholog2880.D8LS67
Preferred nameXPO1
KEGG koko:K03939,ko:K14290
KEGG TC1.I.1,3.D.1.6
KEGG Pathwayko00190,ko01100,ko03008,ko03013,ko04013,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,ko05164,ko05166,ko05169,map00190,map01100,map03008,map03013,map04013,map04714,map04723,map04932,map05010,map05012,map05016,map05164,map05166,map05169
KEGG ModuleM00143
GOsGO:0000003,GO:0000054,GO:0000055,GO:0000056,GO:0000122,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0005049,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0005911,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0007275,GO:0008104,GO:0008150,GO:0008565,GO:0009266,GO:0009408,GO:0009506,GO:0009553,GO:0009555,GO:0009628,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009889,GO:0009890,GO:0009892,GO:0009932,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016049,GO:0019219,GO:0019222,GO:0019904,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033157,GO:0033750,GO:0034613,GO:0040007,GO:0042221,GO:0042254,GO:0042493,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045184,GO:0045892,GO:0045934,GO:0046822,GO:0046825,GO:0046907,GO:0048229,GO:0048468,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0055044,GO:0060255,GO:0060341,GO:0060560,GO:0065007,GO:0070201,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0098687,GO:0140104,GO:0140142,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.nuclear export signal receptor activity
EggNOG OGsCOG5101@1,KOG2020@2759
COG Functional cat.UY
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03016,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-12_004630.1
Exons4
Model size576
Cds size576
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14787.3418.1prot_E-fasciculatus_F_contig14787.3418.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14787 505..3092 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927961.7350972-CDS-E-fasciculatus_F_contig14787:504..6601622927961.7350972-CDS-E-fasciculatus_F_contig14787:504..660Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 505..660 +
1695995768.6337588-CDS-E-fasciculatus_F_contig14787:504..6601695995768.6337588-CDS-E-fasciculatus_F_contig14787:504..660Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 505..660 +
1622927961.7490783-CDS-E-fasciculatus_F_contig14787:1020..11711622927961.7490783-CDS-E-fasciculatus_F_contig14787:1020..1171Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 1021..1171 +
1695995768.6488779-CDS-E-fasciculatus_F_contig14787:1020..11711695995768.6488779-CDS-E-fasciculatus_F_contig14787:1020..1171Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 1021..1171 +
1622927961.766877-CDS-E-fasciculatus_F_contig14787:1609..17131622927961.766877-CDS-E-fasciculatus_F_contig14787:1609..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 1610..1713 +
1695995768.6657944-CDS-E-fasciculatus_F_contig14787:1609..17131695995768.6657944-CDS-E-fasciculatus_F_contig14787:1609..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 1610..1713 +
1622927961.7806323-CDS-E-fasciculatus_F_contig14787:2927..30921622927961.7806323-CDS-E-fasciculatus_F_contig14787:2927..3092Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 2928..3092 +
1695995768.680004-CDS-E-fasciculatus_F_contig14787:2927..30921695995768.680004-CDS-E-fasciculatus_F_contig14787:2927..3092Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14787 2928..3092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14787.3418.1

>prot_E-fasciculatus_F_contig14787.3418.1 ID=prot_E-fasciculatus_F_contig14787.3418.1|Name=mRNA_E-fasciculatus_F_contig14787.3418.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=192bp
FQRNIAGARDPEVLSLFAQAIEKLGDAVQQYVPRIMEAVFECTLLMITRN
FEDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTER
NIAETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQSNRQYVMDFVGNL
LLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLK
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mRNA from alignment at E-fasciculatus_F_contig14787:505..3092+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14787.3418.1 ID=mRNA_E-fasciculatus_F_contig14787.3418.1|Name=mRNA_E-fasciculatus_F_contig14787.3418.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2588bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14787:505..3092+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTCAGCGGAATATCGCGGGTGCGAGGGATCCGGAGGTGCTGTCGCTCTT
CGCCCAGGCCATTGAGAAGCTGGGAGACGCGGTGCAGCAGTACGTGCCTA
GGATCATGGAGGCCGTGTTCGAGTGCACGCTGCTCATGATCACAAGAAAC
TTCGAGGTGGGTTTTTGGTTGAGGGTTATGGGTGGCATGCCTGCTGGTGC
TGGTGACGGGCTGGTGCTGGTGACGGTCTTGTGAAGTGTTTTTTAGCTGG
TGCTGATACCGGCGTTGGATATTGTTGTTCGGTCCATATCGGTGTTGGAC
ATTTGCATGTGGCGTTGGTGTAAGGTGGTGTCTGTCCTGAACCCTTCCCG
CTTCCTCCGTCTCCAGCAGTTGTCCATGAATAATGTACACCTTTCTCTTT
ATTTTTTGTGCGCGCAGCAGTAGATTCGAATGTTTTTCACTCTCTTGTTG
ACTCTTTCGGTTTACAATCGCGATCGACCCCCGCGTCTGCGCTTTTCTTT
TTTTTTTTCGTTTCAGGACTTCCCGGAGCACCGGTTGAAGTTCTTCCGGT
TCTTGAAGGCGGTCAACACACACTGCTTCGGCACCCTGTTCGAGATCCCT
CCAGAGCACCAGAAGCTCGTGGTCGACAGCGTCGTTTGGGCGTTCAAGCA
CACCGAGCGCAACATCGGTGGGTGTTTTTGTCATGTCATGGTTTGATGGG
GATAGGAGTTGTTTTACCTGCTGTTGAGCTCCCTCGAGCGCGGCGCATGT
CGGAATGATTGTGGCAAATCTTTCTTGTTTCCTTGTTTTCCACCCCTCTC
TCTCTCTCCCTTCCCTATGGAGACGGGGGATGCGGCATTGTGGTCTATAT
TTTGGAGGGGAGGGGTCGTTGTTGTTTTTGTTGGCGTTGTTTTGGCATTT
CAGCTTTGATGTTGGGTTGTGGACCATGCTTGTCCAAGGAATCGTGAGGG
AGACGACGAGCTGCCTGACACGTGTCTTCGGGCGAATTTCAATAATGTGC
GTTCGCTGTCGTAGAGTTGTCGATATCCTTGCAGAAACAGCAGAAACAAC
GAAACTAACGCGAGAACATGGTGTCGTTGCAACTCCCGTTGTGACTAACT
CGCAGCGGAAACCGGCCTGGAGATCTTGTACGAGCTGCTGATGAATGTAG
GGAGGACCCCGGCGGTTGCGCAGGGCTTCTACCGACAGTTCCTGCTGTCC
CTTATCCAGGTCCGCATTACGCTTCTGCCTCTGTTGTTGTTGACGATGCT
GTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTAGGAGACAC
TTTTTTCGGTCACCCTCACGGCAGGGTTGTGTATAGCACTCTGTTAGTTA
CTTTTTTTGCAATGAATTTGTTTTTTTGGTGTCCCGCTCGTTGTCCGACA
CCCCGGAGTCCTCGTGGCAAGAACGCGAGGATGCGATACCATCCTACAGC
AGTATGTAGCTTGCCCACGGAGATTAGAGCTGTCAGAAGGCTGGAGCAAA
TGCACCGTGTGGATATTCGTTGTTGCGGTTGCTAGCATATGTGAAACGCG
TCGAGAATAATGTGTGTGCAGTGAGATTCCAGAACAGGTTGATCGATTAA
TCTGTGTACCGGTCGTTCGCCGTACTGGTTGTTTGTCATGACTGCTGTCA
TCTCTTGATAGTCTAAAACTGACGTGCAGTTTGTGTGTATGTCTGCTTCG
CTTGCGGGCATCGATCGATCGCTCTTTTTGTCATGATTGTGATGGGCATT
GCAGGACATCTTGGCGGTGATGACGGACCGACTCCACAAGAGCGGCTTCA
AGATGCACGCCACCCTGCTCCGTCACATGTTCCAGCTCGTAGAGGCCGGG
CACGTCACGCTAGAGCTCTACGATGCCGCGCAGAACCCCGGCGTAACGGT
GAGGACCTCTCACGCAAAAGGGAGTACGGAGGGGGGGGGCCGTTGTCGTG
GTTGGATGGGACCCCGATTGCGTGTGTGTTTGTGTGCTGTCGTAGTATTA
TGGTACCGATTTGTTGTTGCGAAACGTCAGGTTTTACACCTTTTGGTATG
GTTGGGCGTACAGTACCAGAGCCAGCGACGGTCACGCCGAAGTGCATGGT
GGCTGTTTTTTGCAGTTTGTTTAGGAATGTTGTGTCTTGGTTCGTCGTCA
TATAAGGGACGGAGTTGGAGACGAACAAACGAGCAGAAAATTGCAGCGGC
AGAAACTAATCGTCCCGTCCCGTCCCATGCCGTCCCGTCCCATGCCGTCC
CGTCCCATATCGTCCCGTCCGTCGCGTTGTAAACTGTTTTTTTCCATGTG
TTTTTGTGCTCGCCGTCGCTGTGTCTGTCTGATGCCATTGTAACCAACCG
CGATCGAATCGACGTCGACATCGATTGGAACCAACCGCCATCGAACCGAC
ATCGACATCGATTGGATCACCAGAGCAACCGGCAGTACGTGATGGACTTC
GTGGGGAACCTCCTCCTGACGTCGTTCCCGAACCTGACCAAGGCCCAGGT
GGCCGTGTTCGTGGCCGGCCTGCTGAACTCGGACATGGACCTCAACACGT
TCAAGCTGCACCTCCGTGATTTCCTCGTCACCCTCAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14787:505..3092+

>mRNA_E-fasciculatus_F_contig14787.3418.1 ID=mRNA_E-fasciculatus_F_contig14787.3418.1|Name=mRNA_E-fasciculatus_F_contig14787.3418.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14787:505..3092+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTCAGCGGAATATCGCGGGTGCGAGGGATCCGGAGGTGCTGTCGCTCTT
CGCCCAGGCCATTGAGAAGCTGGGAGACGCGGTGCAGCAGTACGTGCCTA
GGATCATGGAGGCCGTGTTCGAGTGCACGCTGCTCATGATCACAAGAAAC
TTCGAGTTTCAGCGGAATATCGCGGGTGCGAGGGATCCGGAGGTGCTGTC
GCTCTTCGCCCAGGCCATTGAGAAGCTGGGAGACGCGGTGCAGCAGTACG
TGCCTAGGATCATGGAGGCCGTGTTCGAGTGCACGCTGCTCATGATCACA
AGAAACTTCGAGGACTTCCCGGAGCACCGGTTGAAGTTCTTCCGGTTCTT
GAAGGCGGTCAACACACACTGCTTCGGCACCCTGTTCGAGATCCCTCCAG
AGCACCAGAAGCTCGTGGTCGACAGCGTCGTTTGGGCGTTCAAGCACACC
GAGCGCAACATCGGACTTCCCGGAGCACCGGTTGAAGTTCTTCCGGTTCT
TGAAGGCGGTCAACACACACTGCTTCGGCACCCTGTTCGAGATCCCTCCA
GAGCACCAGAAGCTCGTGGTCGACAGCGTCGTTTGGGCGTTCAAGCACAC
CGAGCGCAACATCGCGGAAACCGGCCTGGAGATCTTGTACGAGCTGCTGA
TGAATGTAGGGAGGACCCCGGCGGTTGCGCAGGGCTTCTACCGACAGTTC
CTGCTGTCCCTTATCCAGCGGAAACCGGCCTGGAGATCTTGTACGAGCTG
CTGATGAATGTAGGGAGGACCCCGGCGGTTGCGCAGGGCTTCTACCGACA
GTTCCTGCTGTCCCTTATCCAGAGCAACCGGCAGTACGTGATGGACTTCG
TGGGGAACCTCCTCCTGACGTCGTTCCCGAACCTGACCAAGGCCCAGGTG
GCCGTGTTCGTGGCCGGCCTGCTGAACTCGGACATGGACCTCAACACGTT
CAAGCTGCACCTCCGTGATTTCCTCGTCACCCTCAAGAGCAACCGGCAGT
ACGTGATGGACTTCGTGGGGAACCTCCTCCTGACGTCGTTCCCGAACCTG
ACCAAGGCCCAGGTGGCCGTGTTCGTGGCCGGCCTGCTGAACTCGGACAT
GGACCTCAACACGTTCAAGCTGCACCTCCGTGATTTCCTCGTCACCCTCA
AG
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