mRNA_E-fasciculatus_F_contig1478.3416.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI) HSP 1 Score: 974 bits (2517), Expect = 0.000e+0 Identity = 656/682 (96.19%), Postives = 670/682 (98.24%), Query Frame = 2
Query: 2 IVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDELCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVRTWCYRRMHDRVIARQHTIVMAVQDILKQVHERGLGHPAFFEPDVQVGMNEGTDHFYALVYERFWDTMLPALEREWETGTAAPRGAVTSFGYSREEVDTVLVDYRDPTGRVLRTKTQMFRRCGCMGDNGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEGKKNYNKKAIRMAEALKKKKQMGEFESEAEAMKAHRRQVVERKFSKRKDSLNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVEKLEEKAAMAAAQKTRKVMGKKVKRGDKEFQEIVDEMVVDLVLQDMEAAGEIARKKAEQEHEVFRRIMAMWLGVGMRESFAEWKTWTKKRIRQRRRDARKALQEAWHDYDAAGVVSVMAEWKASFWEEEYDIYTDTQSWRHK 2047
IVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPD LCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVR WCYRRMHDRVIARQHTIVMAVQDILKQ+HERGLGHPAFFEPDV+VGMNEGTDHFYALVYERFWDTMLPALEREW+TGTAAPRGAVTSFGYSREEVD+VL+DYRDPTGRVLRTKTQMFRRCGCMG NGRRRVCVPPKVGWMCERKATLIKHDIILEREQEER+RQATEREDIEFRV LARRLVKEGSETIEGKKNY KKAIRMAEALKKKKQMG+FESEAEAMKAHRRQVVE+KFSKRKD+LNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEV KLEEKAAM A QK RKVMGKKVKRGDKEFQEIVDEMVVDLVLQDMEAAGE AR+KAEQEHEVFRRIMAMWLGVGMRESFAEWK WTKKRI QRR+DARKAL+EAWHDY+AAGVVSVMAEWKASFWEEEYDIYTDTQ+WRHK
Sbjct: 167 IVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDGLCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVRAWCYRRMHDRVIARQHTIVMAVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAAPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVTLARRLVKEGSETIEGKKNYTKKAIRMAEALKKKKQMGDFESEAEAMKAHRRQVVEKKFSKRKDALNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVAKLEEKAAMVATQKARKVMGKKVKRGDKEFQEIVDEMVVDLVLQDMEAAGESARRKAEQEHEVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDARKALREAWHDYEAAGVVSVMAEWKASFWEEEYDIYTDTQTWRHK 848
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE) HSP 1 Score: 941 bits (2433), Expect = 0.000e+0 Identity = 495/563 (87.92%), Postives = 517/563 (91.83%), Query Frame = 2
Query: 644 QNDMVYPPKEVILQGCDRVRTWCYRRMHDRVIARQHTIVMAVQDILKQVHERGLGHPAFFEPDVQVGMNEGTDHFYALVYERFWDTMLPALEREWETGTAAPRGAVTSFGYSREEVDTVLVDYRDPTGRVLRTKTQMFRRCGCMGDNGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEGKKNYNKKAIRMAEALKKKKQMGEFESEAEAMKAHRRQVVERKFSKRKDSLNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVEKLEEKAAMAAAQKTRKVMGKKVKRGDKEFQEIVDEMVVDLVLQDMEAAGEIARKKAEQEHE------------------VFRRIMAMWLGVGMRESFAEWKTWTKKRIRQRRRDARKALQEAWHDYDAAGVVSVMAEWKASFWEEEYDIYTDTQSWRHKETGEVRTVRPTVEEFIPEGYEVPKPPSQRLEDMSSTGSSSSGGYSSGDTEETAPRRRGRGTAGDSRSNGSKSSGWSI 2278
QNDMVYPPKE+ILQGCDRVR WC+RRMHDRV ARQHTIVM VQDILKQ+HERGLGHPAFFEPDV+VGMNEGTDHFYALVYERFWDTMLPALEREW+TGTA PRGAVTSFGYSREEVD+VL+DYRDPTGRVLRTKTQMFRRCGCMG NGRRRVCVPPKVGWMCERKATLIKHDIILEREQEER+RQATEREDIEFRVALARRLVKEGSETIEGKK+Y KKAIRMAEALKKKKQMGEFESEAEAMK HRRQVVE+KFSKRKD+LNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPED+KLAEVEQQLEEEV KLEEK AM A QK R VMGKKVKR DKEFQEIVDEMVVDLVLQDMEAAGE AR+KAEQEHE VFRRIMAMWLGVGMRESFAEWK WTKKRI QRR+DARKAL+EAWH+Y+AAGVVSVMAEWKASFWEEEYDIYTDTQ+WRHKETG+VRTVRPTVEEFIP+GYEVPKPPSQRLEDMSSTGSS EETAPRRRGRGTAGDSRS+GS+ SGWSI
Sbjct: 80 QNDMVYPPKEIILQGCDRVRAWCHRRMHDRVSARQHTIVMTVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAVPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVALARRLVKEGSETIEGKKSYTKKAIRMAEALKKKKQMGEFESEAEAMKVHRRQVVEKKFSKRKDALNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDRKLAEVEQQLEEEVAKLEEKVAMVATQKARNVMGKKVKR-DKEFQEIVDEMVVDLVLQDMEAAGENARRKAEQEHEARLWKQFIIPSFQSDAPRVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDARKALREAWHNYEAAGVVSVMAEWKASFWEEEYDIYTDTQTWRHKETGDVRTVRPTVEEFIPDGYEVPKPPSQRLEDMSSTGSSXXXXXXXX-XEETAPRRRGRGTAGDSRSDGSRXSGWSI 640
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: D8LMJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ0_ECTSI) HSP 1 Score: 292 bits (747), Expect = 3.960e-87 Identity = 158/185 (85.41%), Postives = 173/185 (93.51%), Query Frame = 2
Query: 2867 DSNVSSPLDGVSAKAIVSGNRRASMRVDKGQSRKTSRPKSKGLAVFIKDKAMEVYKDAEELVQASEGGSSSPSSLRTEKSLQRQKDWEIDHAMVRARKLREERVQEYQQEQKIRREIAVIEAGTLSSRETAEPSVDEVMSMVGWDPQGTYTNKEFETFANNATKKLRELGREDTFELAKYGNKAF 3421
D+NV SP+DGV+ KAIVSGNR+ASMRVDK + RKT+R KSKGLAVFIKDKA+EV +DAE+LVQAS+GGSSSPSSLRTEKSLQRQK+WE+DHAMVRARKLREER+QEYQQEQKIRREIA IEA LSS ++ EPSVDEVMSMVGWDPQGTYTNKEFETFAN ATKKLRELGREDTFELAKYGNKAF
Sbjct: 39 DTNVPSPVDGVAGKAIVSGNRKASMRVDK-ELRKTNRSKSKGLAVFIKDKAVEVLRDAEKLVQASDGGSSSPSSLRTEKSLQRQKEWEVDHAMVRARKLREERIQEYQQEQKIRREIAAIEAAKLSSHDSVEPSVDEVMSMVGWDPQGTYTNKEFETFANKATKKLRELGREDTFELAKYGNKAF 222
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A6H5KBV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBV0_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.620e-53 Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 2
Query: 3089 LRTEKSLQRQKDWEIDHAMVRARKLREERVQEYQQEQKIRREIAVIEAGTLSSRETAEPSVDEVMSMVGWDPQGTYTNKEFETFANNATKKLRELGREDTFELAKYGNKAF 3421
+RTEKSLQRQK+WE+DHAMVRARKLREERVQE+QQEQKIRREIA IEA LSS +T EPSVDEVMSMVGWDPQ TYTNKEFETFAN ATKKLRELGREDTFELAKYGNKAF
Sbjct: 1 MRTEKSLQRQKEWEVDHAMVRARKLREERVQEFQQEQKIRREIAAIEAAKLSSHDTVEPSVDEVMSMVGWDPQETYTNKEFETFANKATKKLRELGREDTFELAKYGNKAF 111
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A7S4A2F7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2F7_9STRA) HSP 1 Score: 192 bits (489), Expect = 5.380e-46 Identity = 262/728 (35.99%), Postives = 373/728 (51.24%), Query Frame = 2
Query: 11 LRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDELCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQND--MVYPPKEVILQGCDRVRTWCYRRMHDRVIARQHTIVMAVQDILKQVHE--RGLGHPAFFEPDVQVGMNEGTDHFYALVYERFWDTMLPALEREWETGTAAPRGAVTSFGYSREEVDTVLVDYRDPTGRV-LRTKTQMFRRCGCMGDNGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEGKKNYNKKAIRMAEALKKKKQMGEFESEAEAMKAHRRQVVERKFSKRKDSLNKEREHRLADLKLKVAG-LQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVEKLEEKAAMAAAQKTRKVMGKKVKRGDKEFQEIVDEMVV-----DLVLQDMEAAGEIAR-----------KKAE----QEHEVFRRIMAMWLGVGMRESFAEWKTWTKKRIRQRRRDARKALQEA--WHDYDAAGVVSVM--AEWKASFWEEEYDIYTDTQSWRHKETGEVRTVRPTVEEFIPEG 2104
LR V GL P G+ L L L+L+SN L E+PD +CDL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RM C L+ ++NKL LP CL +M LT +S XXXXXXXXXXXXXXXXXX + M YP + +LQG + VR W +R + AR+H +V +QD ++Q E + H +FE G+ ++ +V+++FWD MLP L W + VT+ +SR EV VL DY+D G+V ++ + MF+RC C+ +G ++VCVPPK GWMC+R+A L K +IL+RE+ + E I+ V AR + EG + + K+A++ A +++ EF + + +E++F + L R A+L ++ L+ + + G+ +E + QI +VL ++ +PED+ + E+ + A+ AAQK R KE+ + V M + +L + E A E++ KKAE +EH R+I W G+G E F W+ W ++ ++R +D A ++ W AA V+ + A+W +++ D ++D W H+ETG P VE +P G
Sbjct: 247 LRFVAHGLDRFPERAGKELTQLTQLTLASNRLTELPDSICDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRMTCHTLSFNHNKLVALPRCLANMINLTALSXXXXXXXXXXXXXXXXXXXXTVKLCANIIEELPESISRLPRLKSLWLDHNAPMAALPWNFYMLTSLVELRMDANPGMKYPTPDTLLQGAEAVRNWFRKRQKQALFARKHRVVATMQDFMEQCGEVRPSIAHQGYFE----AGVERSGAVWFQVVWDKFWDEMLPGLRDAWAE-KRVDKHRVTAMPFSRSEVQKVLEDYKDAEGKVYMKDQVCMFKRCRCVDADGNKKVCVPPKPGWMCKRRADLFKCRVILQREKRMMDERKREEAAIQQAVENARVAATAFCHSEEGIQRFRKRAVKRAAIEMDERRRIEFNENYDNKLKAKLARIEKRFDDKDKKLRARRGKAEAELYKRLKDDLEPKESTTEGYAQETIKRQIKEVLTTLKNMPEDRDIRYNERARQR---------AIKAAQKN---------RDSKEWHKAVGIMKLFEPASTNLLAEAELAQELSHDLHTRYIDKQLKKAEAEVRKEHAAMRKISGAWSGMGALEVFRGWRKWARREAKRRAKDVFCAQRDELKW----AADCVAALELAQWTVDKYDKFVDEWSDEPYWVHRETGVTVWDEPNVESLLPPG 947
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A835ZAZ8_9STRA (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ8_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.800e-32 Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = 2
Query: 1688 VKRGDKEFQEIVDEMVVDLVLQDMEAAGEIARKKAEQEHEVFRRIMAMWLGVGMRESFAEWKTWTKKRIRQRRRDARKALQEAWHDYDAAGVVSVMAEWKA--------------------SFWEEEYDIYTDTQSWRHKETGEVRTVRPTVEEFIPEGYEVPKPPSQRLEDMSSTGSSSSGGYS 2182
V+R D F E+V E++ D V DME G AR+ +EH V RR+M +WLG+GMRE+FA+WK WTK+RI+ RRRD +A+++AW Y+ V MA W S W E++D Y D W H TG +R PTV E++P GY+ P PPS R+ED+S + S S G S
Sbjct: 128 VQRNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDLSESESEWSDGGS 312
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A7S3MDR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDR4_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.250e-27 Identity = 101/341 (29.62%), Postives = 172/341 (50.44%), Query Frame = 2
Query: 653 MVYPPKEVILQGCDRVRTWCYRRMHDRVIARQHTIVMAVQDILKQVHERGLGHPAFFEPDVQVGMNEGTDHFYALVYERFWDTMLPALEREWETGTAA-----------PRGAVTSFGYSREEVDTVLVDYRDPTGRVLRTKTQMFRRCGCMGDNGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEGKKNYNKKAIRMAE-ALKKKKQMGEFESEAEAMKAHRRQVVERKFSKRKDSLNKEREHRLADLKLKVAGLQEEL-VSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVEKLEE 1636
M+ PP EV+ QG V + + +AR +V+A Q++LKQ+ ER A+FEPD Q ++ D ++AL W +LP L+R WE+ AA +TSF YS +EV L +Y D G VLR + MFRRC C+ +RR CVPP G+MC R L+K +++ ER++ +R QA + + + + A K ++ EG+ A AE L E + ++ +++VV R + ++K + K R+ ++ ++ ++ L+E+ ++ G+ + E +I + +A LPE +L +++ E + L+E
Sbjct: 218 MLDPPPEVMGQGGPAVVAYLKAIYLNDKVARMREVVLATQNVLKQIQERDFADSAYFEPDYQ-RTDKDLDRWFALQLPYLWKDLLPQLKRTWESERAAMGHHRRHKHAAASDDLTSFDYSEQEVMHALTNYSDAVGPVLRMQKAMFRRCACVDSEMKRRPCVPPAPGYMCLRDCVLLKKELVRERDKHDRMWQAYKSDGMRDAMKRADYEAKLYLDSAEGQLWLENTAYEQAEEVLLDSGANVVIEKRFQGVENKKKKVVAR-YDQKKLKVQKVRDRKIQQIESQLETLKEDRRLAKEGYVRNAVEQRIQSLTVQLAHLPETSELQQLQNDCERDCSLLDE 556
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A7S1BRV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRV4_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.380e-25 Identity = 130/505 (25.74%), Postives = 231/505 (45.74%), Query Frame = 2
Query: 653 MVYPPKEVILQ-GCDRVRTWCYRRMHDRVIARQHTIVMAVQDILKQVHE-RGLGHPAFFEPD---VQVGMNEGTDHFYALVYERFWDTMLPALE---REWETGTAAPRGAVTSFGYSREEVDTVLVDYRDPTGRVLRTKTQMFRRCGCMGDNGRRRVCVPPKVGWM------CERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEGKKNYNKKAIRMAEALKKKKQMGEFESEAEAMKAHRRQVVERKFSKRKDSLNKEREHRLADLKLKVAGLQEE-----LVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEV---EKLEEKAAMAAAQKTRKVMGKKVKRGDKEFQEIVDEMVVDLVLQDMEAAGEIARKKAEQEHEVFRRIMAMWLGVGMRESFAEWKTWTKKRIRQRRRDARKALQEAWHDYDAAGVVSVMAEWKASFWEEEYDIYTDTQSWRHKETGEVRTVRPTVEEFIPE 2101
MV P E+I + G D +R W R + + +VMA+QD+L ++ R G A P ++ G+ + +Y R W + +P+L+ +E E G + F Y R E L + D GR++ F C C + + PPK + C R L+K ++L RE ER+R E IE +A + K +T EGK+ + A + +K+ ++ F+ ++ A+ + R E + K++ L K+ + + L K+ ++ +++ R E +ID + +K+LA +E+Q+E V +K +EK + +G K+ + ++ + + V +++ + RKK + +E +R++M WL + + E F WK+WTK+R+ Q+RR+ R A Q A +Y+ + V+A K W E +D + D W H +TGE P +E ++PE
Sbjct: 413 MVNPHLELIQEKGVDGIRKWSECRADMDIHVFRRNLVMALQDVLAKMDTVRKKGEWAGRVPLDSLLKSGVIHNEEEWYQFPESRLWSSFIPSLDDDKQEQENGNT--KNYCVHFPYDRAETMVALEHFEDAAGRIMHKTRGSFDICSCATPC--KTMQSPPKNDGLRQAHTCCTRNVLLVKKKLLLVREVAERKRVQAENFRIEENATIAEIVAKNFLKTEEGKEMVQRLAKTRYKEMKQAEKAAMFQEKSSAIAEYDRVKDEERLKKKRFQLRKKYDEKERYLLEKIQRSNKDNDDGAVINSR------LEHEIDDLRKDY-----EKRLALLERQMEASVIRRQKRKEKIMKTWVDFKHRFLGTAPSEESKKVKHLIMNVETEFVEREVSTS----RKKTMRNNETYRKVMLRWLDLCLYERFDAWKSWTKERLVQKRREVRAANQLARINYEDSLAYIVLANDKLQKWTEHWDDFNDMPFWVHGDTGETVWEEPVLELYLPE 898
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A6H5K6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y7_9PHAE) HSP 1 Score: 103 bits (257), Expect = 7.620e-21 Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 2
Query: 3572 GGGVLTVMHAVAVRPLTSHPYKAGTEHAGFSPDQVLTLPSGKRSELFGELHEGCAASC 3745
GGGVL V+HAV VRPLTSHPY+AGTEHAGFS DQ LT PS KR E+FGE HEGCAASC
Sbjct: 183 GGGVLIVVHAVVVRPLTSHPYEAGTEHAGFSADQALTSPSAKRREIFGESHEGCAASC 240
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Match: A0A7S2D150_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D150_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 7.250e-15 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 2
Query: 959 VTSFGYSREEVDTVLVDYRDPTGRVLRTKTQ-MFRRCGCMGDNGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERQRQATEREDIEFRVALARRLVKEGSETIEG 1279
V SF + R EVD V+ + DP G V T +FRRC C+ ++G+RRVCVPPK GWMC+R A L K +I LE E++ R+ + + +++E A + E+ EG
Sbjct: 25 VKSFPFERTEVDHVMKTFVDPYGPVSMTNEDTLFRRCCCVDESGKRRVCVPPKKGWMCKRTAFLFKMEICLETEKKARELKKAQEKEVESAGIAAETFARTYCESDEG 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1478.3416.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1478.3416.1 >prot_E-fasciculatus_F_contig1478.3416.1 ID=prot_E-fasciculatus_F_contig1478.3416.1|Name=mRNA_E-fasciculatus_F_contig1478.3416.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1028bp MKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVNNGLRSLPSDIGDSRSLTback to top mRNA from alignment at E-fasciculatus_F_contig1478:1866..17379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1478.3416.1 ID=mRNA_E-fasciculatus_F_contig1478.3416.1|Name=mRNA_E-fasciculatus_F_contig1478.3416.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=15514bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1478:1866..17379- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1478:1866..17379- >mRNA_E-fasciculatus_F_contig1478.3416.1 ID=mRNA_E-fasciculatus_F_contig1478.3416.1|Name=mRNA_E-fasciculatus_F_contig1478.3416.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6168bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1478:1866..17379- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |