prot_E-fasciculatus_F_contig14779.3415.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14779.3415.1
Unique Nameprot_E-fasciculatus_F_contig14779.3415.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length337
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14779.3415.1 vs. uniprot
Match: D7FSM1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSM1_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 4.350e-162
Identity = 306/340 (90.00%), Postives = 314/340 (92.35%), Query Frame = 0 
Query:    1 QVCRLATGKSTRLPLLSPSALWQYERSKSAXXXXXXXXXXXXXXXXXXXXX---TFPVANGAGFWLAVVTAPRAFVSRQRQRLRRLKRRIAAAGGAENGYRTTPLGAGGXXXXXXXXXXXXXXXXSR----SRRYGSRAGGSGESMATPKGGEKRLRGRGDPSPWRLASGGDTAAVSPVEGEASPAAAXXXAARGGVVGHVWVALKLRDPSMLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVLVQLVGMSLLVSYCVTLTLRAFHSTRCRASFNCDHETDPKLASLREWQTLADNMLSALSFLDMLLQFRTGYVDKNSKIIIDPKKV 333
            +VCRLATGK+TRLPLLSPSALWQYERSKSAXXXXXXXXXXXXXXXXXXXXX     PVANGAGFWLAVVTAPRAF++RQRQRLRRLKRRIAAAGGAENGYRTTPLGA  XXXXXXXXXXXXXXXX      SRR+GSRAGG GESMATP GG K LRGRGD   WRLASGGDTAAVSPVEGEA PAAA   AARGGVVGHVWV+LKLRDPSMLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVL+QL GMSLLVSYCVTLTLRAFHSTRCRA+FNCD ETDPKLASLREWQTLADNMLSALSFLDMLLQFRTGYVDKNSKIIIDPKKV
Sbjct:   40 EVCRLATGKTTRLPLLSPSALWQYERSKSAXXXXXXXXXXXXXXXXXXXXXXXXVLPVANGAGFWLAVVTAPRAFLARQRQRLRRLKRRIAAAGGAENGYRTTPLGAXXXXXXXXXXXXXXXXXXXXXXXXSRRHGSRAGGPGESMATPTGGGKHLRGRGDL--WRLASGGDTAAVSPVEGEAGPAAAAA-AARGGVVGHVWVSLKLRDPSMLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVLLQLAGMSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQTLADNMLSALSFLDMLLQFRTGYVDKNSKIIIDPKKV 376
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14779.3415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSM1_ECTSI4.350e-16290.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 271..336
NoneNo IPR availableTMHMMTMhelixcoord: 248..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14779contigE-fasciculatus_F_contig14779:252..2720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14779.3415.1mRNA_E-fasciculatus_F_contig14779.3415.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14779 252..2720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14779.3415.1 ID=prot_E-fasciculatus_F_contig14779.3415.1|Name=mRNA_E-fasciculatus_F_contig14779.3415.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=337bp
QVCRLATGKSTRLPLLSPSALWQYERSKSAAAAAIAAAAYPALAAASSSS
STFPVANGAGFWLAVVTAPRAFVSRQRQRLRRLKRRIAAAGGAENGYRTT
PLGAGGARVWWILPPPPPPPAASRSRRYGSRAGGSGESMATPKGGEKRLR
GRGDPSPWRLASGGDTAAVSPVEGEASPAAAAAAAARGGVVGHVWVALKL
RDPSMLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVLV
QLVGMSLLVSYCVTLTLRAFHSTRCRASFNCDHETDPKLASLREWQTLAD
NMLSALSFLDMLLQFRTGYVDKNSKIIIDPKKVTKG*
back to top