prot_E-fasciculatus_F_contig14776.3413.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14776.3413.1
Unique Nameprot_E-fasciculatus_F_contig14776.3413.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length110
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14776.3413.1 vs. uniprot
Match: A0A6H5KJ83_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ83_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.530e-16
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0 
Query:    1 LRRSCISRWASPVVCVVKKNWSVQVTANLKRPNSATSVVPCSARPHIAECVDQLG 55
            LRRS  S WASPVVCV+KKN SV+VTANLKR NSAT VVPCS  PHIAEC+DQLG
Sbjct:  156 LRRSN-SEWASPVVCVMKKNGSVRVTANLKRLNSAT-VVPCSVLPHIAECIDQLG 208
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14776.3413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ83_9PHAE3.530e-1680.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14776contigE-fasciculatus_F_contig14776:782..1111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14776.3413.1mRNA_E-fasciculatus_F_contig14776.3413.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14776 782..1111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14776.3413.1 ID=prot_E-fasciculatus_F_contig14776.3413.1|Name=mRNA_E-fasciculatus_F_contig14776.3413.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp
LRRSCISRWASPVVCVVKKNWSVQVTANLKRPNSATSVVPCSARPHIAEC
VDQLGAAPSSRCSTWSEASTKPGSTRSPSIVTSTALCDFIRVPMGASGAP
NYSVAIVSG*
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