mRNA_E-fasciculatus_F_contig14775.3411.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: D8LK66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK66_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.350e-62 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 1
Query: 19 GWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW 327
GWLAVSPLLGAYTRSATET GGAAKALLPAWG+SIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW
Sbjct: 260 GWLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW 362
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: A0A835ZDH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH1_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.600e-29 Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 19 GWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGD-KQAGLLDGFRMITTLLQRW 327
GWL +SPLLGAYT AT T L+PAW VSIPV + +R KG +VPPVPF + S+I T + L AWR LY +NPT + K+ G+LDGFRMITTLL+RW
Sbjct: 170 GWLGLSPLLGAYTNQATATQKDMISTLVPAWAVSIPVALAIRGAVKG-DVPPVPFIIVSLIATGSLLAAWRGLYVVINPTSTAETKRGGILDGFRMITTLLRRW 272
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: A0A7S2UZN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN6_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.940e-28 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 19 GWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQ---AGLLDGFRMITTLLQRW 327
GWL ++PL GAYTR A G +AK++ AW SIP GIF RAL+KGGE+PP F SM TL L+ WR ++ VN G DK+ G++DGFRMITTL++RW
Sbjct: 178 GWLLLAPLAGAYTRQAVTDQGSSAKSVAVAWVASIPAGIFARALTKGGEIPPTSFIAVSMTATLVLLLTWRAIFVKVN--GSPDKEFRDGGIIDGFRMITTLIKRW 281
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: A0A1X6P744_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P744_PORUM) HSP 1 Score: 85.1 bits (209), Expect = 4.210e-17 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 22 WLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVN--PTGEGDKQAGLLDGFRMITTLLQRW 327
WLAV+PL+GAYTR A T GAA AW V +P G+ LR + +PP FAV +++ T L WR Y + EG K+ G+LDGFRMITTLL+RW
Sbjct: 337 WLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTS-HLPPPSFAVVTLLSTAVLLGVWRGSYVKLRGAEVAEG-KRGGVLDGFRMITTLLRRW 438
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: A0A2V3IEJ3_9FLOR (Adenylate kinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ3_9FLOR) HSP 1 Score: 85.1 bits (209), Expect = 4.590e-17 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 22 WLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVN-PTGEGDKQAGLLDGFRMITTLLQRW 327
WL SPLLGAYTR+AT K + AW V++P+GI LR + VPPV FAV S++ TL + +WR LY + + ++ G+++ F+M+TTLL+RW
Sbjct: 368 WLISSPLLGAYTRAATANIPATLKYFVRAWAVAVPMGIGLRGVVTD-HVPPVVFAVISLVATLLLMGSWRTLYVLIRGDETDSARRGGVVETFKMVTTLLRRW 469
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: A0A5J4YRR5_PORPP (Adenylate kinase 8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRR5_PORPP) HSP 1 Score: 77.0 bits (188), Expect = 3.640e-14 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 19 GWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEG--DKQAGLLDGFRMITTLLQR 324
GW+ SP+LGAYT +AT + + + V++P+G+ +R L VPP FA +MI L L AWR Y +V T + +K+ GLLDGF+MITTLL+R
Sbjct: 642 GWVLGSPVLGAYTAAATSSQSAVLACVARSALVALPLGLAIRGLETS-HVPPPSFAGIAMITNLILLSAWRSAYISVAGTSDPGPEKRGGLLDGFKMITTLLRR 744
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Match: V4X812_9ARCH (Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 TaxID=1412871 RepID=V4X812_9ARCH) HSP 1 Score: 49.3 bits (116), Expect = 4.800e-5 Identity = 29/75 (38.67%), Postives = 41/75 (54.67%), Query Frame = 1
Query: 19 GWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRA-LSKGGEVPPVPFAVTSMIFTLAALMAWRQLY 240
GW SPL+GAY+ A ETA + ++ +W + VG+ LRA + +GG P F V ++ AL WR LY
Sbjct: 60 GWAVFSPLVGAYSAGAVETAKSSVPLVVRSWVPAAAVGLLLRAFVFRGGAAPA--FVVVILVSGTVALGGWRALY 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14775.3411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14775.3411.1 >prot_E-fasciculatus_F_contig14775.3411.1 ID=prot_E-fasciculatus_F_contig14775.3411.1|Name=mRNA_E-fasciculatus_F_contig14775.3411.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp MACTTTGWLAVSPLLGAYTRSATETAGGAAKALLPAWGVSIPVGIFLRALback to top mRNA from alignment at E-fasciculatus_F_contig14775:19..348+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14775.3411.1 ID=mRNA_E-fasciculatus_F_contig14775.3411.1|Name=mRNA_E-fasciculatus_F_contig14775.3411.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=330bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14775:19..348+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14775:19..348+ >mRNA_E-fasciculatus_F_contig14775.3411.1 ID=mRNA_E-fasciculatus_F_contig14775.3411.1|Name=mRNA_E-fasciculatus_F_contig14775.3411.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14775:19..348+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |