mRNA_E-fasciculatus_F_contig14767.3406.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14767.3406.1
Unique NamemRNA_E-fasciculatus_F_contig14767.3406.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: D8LLB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB6_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 3.620e-106
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV-GKGNPRLPLLFA 495
            LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKN+IPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMI VGGG+VKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVK+  +    LPLL A
Sbjct:  198 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNDIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGVVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKIYAEATLVLPLLVA 363
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A812WM17_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WM17_SYMMI)

HSP 1 Score: 255 bits (652), Expect = 1.970e-83
Identity = 112/153 (73.20%), Postives = 136/153 (88.89%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            L  MT+EQ AD V WTPS +I RLG+EIDNE+S+YYWC KN+IPVFCPA+TDGS+GDM+YFH Y+RPEF++DI GD++RINDIAVRA CTGM+ +GGGL+KHH CNANLMRNGA+F+V++NTG E+DGSDSGA PDEAVSWGKIK+ + PVKV
Sbjct:   81 LEAMTNEQVADNVRWTPSQIIRRLGQEIDNEDSVYYWCYKNDIPVFCPAITDGSLGDMMYFHSYRRPEFLVDIVGDIRRINDIAVRAACTGMVILGGGLIKHHTCNANLMRNGAEFSVYINTGHEFDGSDSGASPDEAVSWGKIKMTSNPVKV 233
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A7S2CC55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC55_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.150e-81
Identity = 114/153 (74.51%), Postives = 132/153 (86.27%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            LN M DEQE D  +WTPSTMI RLG+EI+NE+S+YYW  KNNIPV+CPA+TDGS+GDMIYF  YKRP FILDI+ D++ IND AVRA  TGMI +GGGLVKHH CNANLMRNGA F+VF+NTGQ +DGSDSGA PDEA+SWGKIK+DA+PVKV
Sbjct:   35 LNSMMDEQEQDGTIWTPSTMIARLGKEINNEDSVYYWAWKNNIPVYCPAITDGSVGDMIYFFSYKRPGFILDIARDIRGINDEAVRAHATGMIILGGGLVKHHTCNANLMRNGASFSVFINTGQAFDGSDSGAAPDEAISWGKIKIDARPVKV 187
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A7S1BPC0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPC0_9STRA)

HSP 1 Score: 254 bits (648), Expect = 7.880e-81
Identity = 116/153 (75.82%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            LNKM DEQ+   + WTPST+IER+G EI+NEES+ YW AKN IPVFCPALTDGSIGDMIYFH YKR  F+LDI GD+++IND AVR+  TGMI +GGGL+KHH CNANLMRNGADF+VF+NTGQE+DGSDSGARPDEA+SWGKIK+ AKPVKV
Sbjct:  230 LNKMHDEQDKTGIFWTPSTIIERMGLEINNEESVLYWAAKNKIPVFCPALTDGSIGDMIYFHSYKRSGFVLDIVGDIRKINDCAVRSHSTGMILLGGGLIKHHTCNANLMRNGADFSVFINTGQEFDGSDSGARPDEAISWGKIKITAKPVKV 382
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A835YZK5_9STRA (DHS-like NAD/FAD-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK5_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.890e-80
Identity = 113/153 (73.86%), Postives = 137/153 (89.54%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            L  MTDEQ     VWTPS+MI RLG+EI+NE+S+YYWC K+ IPVFCPALTDGSIGDMIYFHKYKRPEF+LD++GD+K INDIAVRA  TGMI +GGG+VKHH CNANLMRNGA+F+VF+NTG ++DGSDSGA+PDEA+SWGK+K+D++PVK+
Sbjct:  199 LMAMTDEQAQLGRVWTPSSMIARLGQEINNEDSVYYWCWKHGIPVFCPALTDGSIGDMIYFHKYKRPEFMLDVTGDIKSINDIAVRAHATGMIVLGGGVVKHHTCNANLMRNGAEFSVFINTGSDFDGSDSGAKPDEAISWGKVKIDSRPVKL 351
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A7S2XYK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK4_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.150e-79
Identity = 107/149 (71.81%), Postives = 132/149 (88.59%), Query Frame = 1 
Query:   13 TDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            TDEQ  + V WTPS +I+RLG+EIDN +S+YYW  KN IPVFCPALTDGSIGDMI+FH YKRPEFILDI+ D++RIN +++RA CTGMI +GGG+ KHH CNANLMRNGA++AV++NT QE+DGSD+GA+PDEA+SWGKI++DAKPVKV
Sbjct:    1 TDEQVENGVRWTPSKLIDRLGKEIDNPDSVYYWAHKNQIPVFCPALTDGSIGDMIFFHMYKRPEFILDIAEDIQRINSLSMRASCTGMIILGGGVAKHHTCNANLMRNGANYAVYVNTAQEFDGSDAGAKPDEAISWGKIRMDAKPVKV 149
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A8J1U011_OWEFU (Ofus.G08729 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U011_OWEFU)

HSP 1 Score: 243 bits (620), Expect = 2.150e-78
Identity = 113/166 (68.07%), Postives = 138/166 (83.13%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV-GKGNPRLPLLFA 495
            L+KM +EQ+ +  +WTPSTMI RLG+EIDN +S+YYW  KNNIPVF PALTDGSIGDMIYFH YK P  ILDI+GDV+++N+  V A  TGMI +GGGLVKHH+CNAN+MRNGA+FAV++NT  E+DGSD+GARPDEAVSWGKIK+DA PVK+ G+ +   PLL A
Sbjct:  104 LDKMLEEQKQESTIWTPSTMIARLGKEIDNPDSVYYWAYKNNIPVFSPALTDGSIGDMIYFHSYKNPGLILDIAGDVRKMNNQTVYAENTGMIILGGGLVKHHICNANMMRNGANFAVYVNTANEFDGSDAGARPDEAVSWGKIKMDATPVKIYGEASMVFPLLVA 269
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A8J1TY47_OWEFU (Ofus.G08729 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TY47_OWEFU)

HSP 1 Score: 243 bits (620), Expect = 1.910e-77
Identity = 113/166 (68.07%), Postives = 138/166 (83.13%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV-GKGNPRLPLLFA 495
            L+KM +EQ+ +  +WTPSTMI RLG+EIDN +S+YYW  KNNIPVF PALTDGSIGDMIYFH YK P  ILDI+GDV+++N+  V A  TGMI +GGGLVKHH+CNAN+MRNGA+FAV++NT  E+DGSD+GARPDEAVSWGKIK+DA PVK+ G+ +   PLL A
Sbjct:  175 LDKMLEEQKQESTIWTPSTMIARLGKEIDNPDSVYYWAYKNNIPVFSPALTDGSIGDMIYFHSYKNPGLILDIAGDVRKMNNQTVYAENTGMIILGGGLVKHHICNANMMRNGANFAVYVNTANEFDGSDAGARPDEAVSWGKIKMDATPVKIYGEASMVFPLLVA 340
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BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A5A8CEQ6_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CEQ6_CAFRO)

HSP 1 Score: 245 bits (626), Expect = 2.330e-77
Identity = 109/153 (71.24%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV 459
            LN+M DEQE+D V WTPS+MI+R G  I N ES++YWCAKN+IPVFCPA+TDGS+GDM++FH YKRP F +DI+ D++ IND+A+RA  +GM+ +GGG+VKHH CNANLMRNGAD++VF+NTG E+DGSDSGARPDEAVSWGKIKLDA PVKV
Sbjct:  205 LNEMHDEQESDGVSWTPSSMIKRFGERIANPESVWYWCAKNDIPVFCPAITDGSVGDMVFFHSYKRPGFKIDIADDIRAINDMALRAKRSGMLILGGGMVKHHTCNANLMRNGADYSVFINTGNEFDGSDSGARPDEAVSWGKIKLDAAPVKV 357
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Match: A0A7S3JQE7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQE7_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.750e-77
Identity = 119/166 (71.69%), Postives = 138/166 (83.13%), Query Frame = 1 
Query:    1 LNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV-GKGNPRLPLLFA 495
            L+K+ DEQE D+ +WTPS +I RLG EI++E S+YYW A+NNIPVFCPA+TDGSIGDM+YF  YKR  FILDI  DV+ IND+AV A  TGMI +GGGLVKHHVCNANLMRNGADFAVF+NTGQE+DGSDSGARPDEA+SWGKIK+ AKPVKV    +   PLL A
Sbjct:  194 LHKLADEQE-DQKIWTPSKLIHRLGLEINDESSVYYWAARNNIPVFCPAITDGSIGDMLYFFSYKR-NFILDIVQDVRAINDLAVHAKATGMIILGGGLVKHHVCNANLMRNGADFAVFLNTGQEFDGSDSGARPDEAISWGKIKMHAKPVKVYADASLAFPLLVA 357
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14767.3406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB6_ECTSI3.620e-10692.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812WM17_SYMMI1.970e-8373.20Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2CC55_9STRA1.150e-8174.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1BPC0_9STRA7.880e-8175.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A835YZK5_9STRA1.890e-8073.86DHS-like NAD/FAD-binding domain-containing protein... [more]
A0A7S2XYK4_9STRA1.150e-7971.81Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J1U011_OWEFU2.150e-7868.07Ofus.G08729 protein (Fragment) n=1 Tax=Owenia fusi... [more]
A0A8J1TY47_OWEFU1.910e-7768.07Ofus.G08729 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A5A8CEQ6_CAFRO2.330e-7771.24Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S3JQE7_9STRA3.750e-7771.69Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14767contigE-fasciculatus_F_contig14767:1320..3226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.1
Seed ortholog evalue1.9e-83
Seed eggNOG ortholog2880.D8LLB6
KEGG koko:K00809
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006464,GO:0006518,GO:0006576,GO:0006595,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008216,GO:0008284,GO:0008612,GO:0009058,GO:0009059,GO:0009308,GO:0009405,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019899,GO:0022607,GO:0030234,GO:0032991,GO:0034038,GO:0034641,GO:0034645,GO:0036211,GO:0042127,GO:0042802,GO:0042803,GO:0043043,GO:0043085,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0051604,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0090342,GO:0090343,GO:0097164,GO:0098772,GO:1901564,GO:1901566,GO:1901576,GO:1902494
EggNOG free text desc.peptidyl-lysine modification to peptidyl-hypusine
EggNOG OGsCOG1899@1,KOG2924@2759
EC2.5.1.46
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size498
Cds size489
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14767.3406.1prot_E-fasciculatus_F_contig14767.3406.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14767 1320..3217 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927959.9481966-CDS-E-fasciculatus_F_contig14767:1319..14501622927959.9481966-CDS-E-fasciculatus_F_contig14767:1319..1450Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 1320..1450 -
1695995767.6873116-CDS-E-fasciculatus_F_contig14767:1319..14501695995767.6873116-CDS-E-fasciculatus_F_contig14767:1319..1450Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 1320..1450 -
1622927959.9616382-CDS-E-fasciculatus_F_contig14767:1989..21331622927959.9616382-CDS-E-fasciculatus_F_contig14767:1989..2133Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 1990..2133 -
1695995767.6979618-CDS-E-fasciculatus_F_contig14767:1989..21331695995767.6979618-CDS-E-fasciculatus_F_contig14767:1989..2133Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 1990..2133 -
1622927959.9729514-CDS-E-fasciculatus_F_contig14767:2423..25261622927959.9729514-CDS-E-fasciculatus_F_contig14767:2423..2526Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 2424..2526 -
1695995767.7082882-CDS-E-fasciculatus_F_contig14767:2423..25261695995767.7082882-CDS-E-fasciculatus_F_contig14767:2423..2526Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 2424..2526 -
1622927959.9867644-CDS-E-fasciculatus_F_contig14767:3106..32171622927959.9867644-CDS-E-fasciculatus_F_contig14767:3106..3217Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 3107..3217 -
1695995767.717599-CDS-E-fasciculatus_F_contig14767:3106..32171695995767.717599-CDS-E-fasciculatus_F_contig14767:3106..3217Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14767 3107..3217 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927959.9998362-UTR-E-fasciculatus_F_contig14767:3217..32261622927959.9998362-UTR-E-fasciculatus_F_contig14767:3217..3226Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14767 3218..3226 -
1695995767.7262182-UTR-E-fasciculatus_F_contig14767:3217..32261695995767.7262182-UTR-E-fasciculatus_F_contig14767:3217..3226Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14767 3218..3226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14767.3406.1

>prot_E-fasciculatus_F_contig14767.3406.1 ID=prot_E-fasciculatus_F_contig14767.3406.1|Name=mRNA_E-fasciculatus_F_contig14767.3406.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp
MTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNNIPVFCPALTDG
SIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMISVGGGLVKHH
VCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKV
GKGNPRLPLLFAS
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mRNA from alignment at E-fasciculatus_F_contig14767:1320..3226-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14767.3406.1 ID=mRNA_E-fasciculatus_F_contig14767.3406.1|Name=mRNA_E-fasciculatus_F_contig14767.3406.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1907bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14767:1320..3226- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTGAACAAGATGACCGACGAGCAGGAGGCTGACAAGGTGGTGTGGACGCC
CTCGACGATGATCGAGCGCCTTGGCCGTGAGATCGATAACGAGGAGTCCA
TCTACTACTGGTGCGCGAAGGTGAGCCTTCCTCAGCCTCGCTTCGAAAGG
GAAGCGGGGTGAATGATGAAACGAAGCAACAAACGAGCACACACACCCTC
TTGGCCTTCATCAGACTGCCGCTGTCGGAATGCTTTCAACCAGGCGGTGG
AGCCCGCACCCGTCCTAGAAAGGGTGCTGCCTCCGCACATATTTGGTTTC
CTCTCAAATGTAATCGTGCCTTCCAATGCGTGTGCCCCTCTTGCTGCTGG
GCGCATTTTTCCGTGCATGAAGACGGGGTAAAGTTTCATCAATCTCTCGA
TTCTGACGCTTACCTAAACTCCGCTATCTTGCCAAGTTTTGGGCCGTGCA
CCCCGCTGTTGATCGAAGTTGTTTTCTTGCTTGTCCGGCGTTCGCAAGCA
CCTTGCGGAGAACGATATCCCTCAGCGCTCCGCTGACCACGGGCGGAAAA
CAAGCTTTCTATAGGCGGCATTAGTCCATCGTTAACCCAGGTCGTTCCAC
GGACGATTTCGTGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTC
GTCATGCATGCCTTACCTTGCCTCTCTGTTGACGGCTGCTGAACGCCAAG
AACAACATCCCGGTATTCTGCCCGGCGTTGACGGACGGATCGATAGGGGA
CATGATTTACTTCCACAAGTACAAGCGCCCGGAGTTTATCCTTGACATCT
CGGGTAAGAGACTAACAGGGGGGGGGGGGGTGCAGCCGCTTGAAAGCGGC
GGATATTTTCGCGCAAGTGTAGTGCAGCATTGTGTTTCGCCGTGAAGGTA
GTGAGAGAAGCCTGTTGAGTATGTATCCCCTGGGTGCCGTGGCTCCGAAG
GTTGCTTCTTCGAAGCGGTGACTAACTTGAAACCGTTTGGATCTGCGTCG
CCCGCCTAGGTGCCGATTATTGCAGGATGGCGGATCTGCTTTTCGTGTCT
GCACCCCCTTTTGACCCCGTCACCCGCGCGCTGTATCTCCCAGGGGACGT
GAAGCGAATAAACGACATCGCCGTTCGGGCGCCGTGCACCGGCATGATCA
GTGTCGGCGGGGGGTTGGTGAAGCACCACGTCTGCAACGCGAACCTTATG
CGGAACGGGGCTGACTTTGCGGTTTTCATGAACACAGGTAATCTACCGTG
GAGTTTTTCGTGTCGGTGGTGGTTTGGTTTGCTCATTTTATCGGACCAGT
TGCTCTACTTGCGGAGCATACGGGGGGGAGAAAGTTTTTGTTTTGGCCGG
GCCGTGGGGTCCTTGCTTTCAGGAATGCCTCCATTTTACTGAAGCCCTCA
CGCTTGGCGAGGAAGATCGTGGTTACTGGCGTGCTAAGCCATTGGGCACT
GCTGGTGAGGCCACTTCAGTAACGTAGAGCGTTCTCACTTAATGAAGCAT
GTCCTCGTTGATATCGCGACGAGAACAATCAAGAGGTCGGAAGTCACCCT
ACTTGGAGACAGAGAGCTCCGTCTCGACTGGTACGTGGACAGGCAGGCCT
CAAGACTGAGGCAACTGCAAAAACATGAGTATTCGCCCCCGGCTTCCTGG
CACAAATATCCCGGGTGTGGGTATGTACAGTACACATCCCCGCCTTGGGC
TTTGTTTCGCCATCAGAAGGAAACCATGTCCTGAGGTGGTGATTCGACGT
TTTTGCTCTCGTGTGTACATGTCCAGGTCAAGAATACGACGGCAGCGACT
CCGGGGCGAGGCCGGACGAGGCGGTGTCGTGGGGAAAGATCAAGCTCGAC
GCTAAACCTGTAAAGGTGGGTAAGGGTAACCCCCGTCTCCCCCTGTTGTT
TGCTTCA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14767:1320..3226-

>mRNA_E-fasciculatus_F_contig14767.3406.1 ID=mRNA_E-fasciculatus_F_contig14767.3406.1|Name=mRNA_E-fasciculatus_F_contig14767.3406.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14767:1320..3226- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCGACGAGCAGGAGGCTGACAAGGTGGTGTGGACGCCCTCGACGAT
GATCGAGCGCCTTGGCCGTGAGATCGATAACGAGGAGTCCATCTACTACT
GGTGCGCGAAGATGACCGACGAGCAGGAGGCTGACAAGGTGGTGTGGACG
CCCTCGACGATGATCGAGCGCCTTGGCCGTGAGATCGATAACGAGGAGTC
CATCTACTACTGGTGCGCGAAGAACAACATCCCGGTATTCTGCCCGGCGT
TGACGGACGGATCGATAGGGGACATGATTTACTTCCACAAGTACAAGCGC
CCGGAGTTTATCCTTGACATCTCGGAACAACATCCCGGTATTCTGCCCGG
CGTTGACGGACGGATCGATAGGGGACATGATTTACTTCCACAAGTACAAG
CGCCCGGAGTTTATCCTTGACATCTCGGGGGACGTGAAGCGAATAAACGA
CATCGCCGTTCGGGCGCCGTGCACCGGCATGATCAGTGTCGGCGGGGGGT
TGGTGAAGCACCACGTCTGCAACGCGAACCTTATGCGGAACGGGGCTGAC
TTTGCGGTTTTCATGAACACAGGGGACGTGAAGCGAATAAACGACATCGC
CGTTCGGGCGCCGTGCACCGGCATGATCAGTGTCGGCGGGGGGTTGGTGA
AGCACCACGTCTGCAACGCGAACCTTATGCGGAACGGGGCTGACTTTGCG
GTTTTCATGAACACAGGTCAAGAATACGACGGCAGCGACTCCGGGGCGAG
GCCGGACGAGGCGGTGTCGTGGGGAAAGATCAAGCTCGACGCTAAACCTG
TAAAGGTGGGTAAGGGTAACCCCCGTCTCCCCCTGTTGTTTGCTTCAGTC
AAGAATACGACGGCAGCGACTCCGGGGCGAGGCCGGACGAGGCGGTGTCG
TGGGGAAAGATCAAGCTCGACGCTAAACCTGTAAAGGTGGGTAAGGGTAA
CCCCCGTCTCCCCCTGTTGTTTGCTTCA
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