mRNA_E-fasciculatus_F_contig10019.34.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: D7G3U2_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U2_ECTSI) HSP 1 Score: 258 bits (659), Expect = 5.450e-83 Identity = 140/147 (95.24%), Postives = 140/147 (95.24%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAPLFAANTAVASYLLTTE VTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV
Sbjct: 171 CVFLAPLFAANTAVASYLLTTE-------VTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 310
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: A0A484E0M2_BRELC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0M2_BRELC) HSP 1 Score: 230 bits (586), Expect = 5.820e-68 Identity = 122/147 (82.99%), Postives = 131/147 (89.12%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAPLFAANTA+AS+LLT E VTKRSS GLLAAAFT IVPSYISRSVGGSYDNEGVAIFAL+FVFYLWIK+V+TGSM WA ALAYFYMVAAWGGYVFIIN+IPIYV+VM+VAGRYS RLYIAYSTFY LGS+MAMQV
Sbjct: 158 CVFLAPLFAANTAIASFLLTKE-------VTKRSSAGLLAAAFTGIVPSYISRSVGGSYDNEGVAIFALLFVFYLWIKAVHTGSMFWAAACALAYFYMVAAWGGYVFIINMIPIYVLVMIVAGRYSPRLYIAYSTFYTLGSLMAMQV 297
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: A0A1V9Z2X8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2X8_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.420e-67 Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAP+FAANTA+ASY+LT E VTKRSS GLLAAAF +VPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+VNTGSM WA +LAYFYMVAAWGGYVFIIN+IPIYV+VM+ AGRY+ RLYIAYSTFYALGS+MAMQV
Sbjct: 161 CVFLAPMFAANTAIASYMLTKE-------VTKRSSAGLLAAAFAGVVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVNTGSMFWAAACSLAYFYMVAAWGGYVFIINMIPIYVLVMIFAGRYTPRLYIAYSTFYALGSLMAMQV 300
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: W2HBT5_PHYPR (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2HBT5_PHYPR) HSP 1 Score: 226 bits (577), Expect = 1.130e-66 Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAPLFAANTA+ASYLLT E VTKRSS GLLAAAF IVPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+V+TGSM W+ ALAYFYMVAAWGGYVFIIN+IPIYV+VM+ AGRY+ RLYIAYSTFYALGS+MAMQV
Sbjct: 160 CVFLAPLFAANTAIASYLLTKE-------VTKRSSAGLLAAAFAGIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVHTGSMFWSAGCALAYFYMVAAWGGYVFIINMIPIYVLVMIFAGRYTPRLYIAYSTFYALGSLMAMQV 299
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: I2CR01_NANGC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR01_NANGC) HSP 1 Score: 225 bits (573), Expect = 4.980e-66 Identity = 116/147 (78.91%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVF AP+FA NTA+ASYLLTTE VTKRS+ GLLAAAF IVPSYISRSVGGSYDNEGVAIFAL+F FYLWIK+V+TGSMMWA LTAL+YFYMVAAWGGYVFIINIIPI+V+ ++VAGR+S RLY+AYSTFY LGSI+AMQV
Sbjct: 161 CVFCAPIFAGNTAIASYLLTTE-------VTKRSAAGLLAAAFAGIVPSYISRSVGGSYDNEGVAIFALVFTFYLWIKAVHTGSMMWAALTALSYFYMVAAWGGYVFIINIIPIHVLALIVAGRFSKRLYVAYSTFYVLGSILAMQV 300
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: A0A8K1C594_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C594_PYTOL) HSP 1 Score: 224 bits (571), Expect = 8.300e-66 Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAP+FAANTA+ASYLLT E VTKRSS GL+AAAF IVPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+V+TGSM W+ ALAYFYMVAAWGGYVFIIN+IPIYV+VM+ AGRYS RLYIAYSTFY LGS+MAMQV
Sbjct: 162 CVFLAPVFAANTAIASYLLTKE-------VTKRSSAGLMAAAFAGIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVHTGSMFWSASCALAYFYMVAAWGGYVFIINMIPIYVLVMLFAGRYSPRLYIAYSTFYTLGSLMAMQV 301
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: A0A7S3H9K2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9K2_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.030e-65 Identity = 113/147 (76.87%), Postives = 131/147 (89.12%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVF+AP+F+A A++SYLLTTE VTKRSS+GLLAAAFTA+VPSYISRSVGGSYDNEGVAIFALIF FYLW+KSV+TGSMMW+C+ AL+Y+YMVAAWGGYVFIINIIPI+ V+M+V GRYSSRLY+AYS FY LGS+MAM V
Sbjct: 149 CVFIAPIFSALAAISSYLLTTE-------VTKRSSSGLLAAAFTAVVPSYISRSVGGSYDNEGVAIFALIFTFYLWVKSVHTGSMMWSCMCALSYYYMVAAWGGYVFIINIIPIFTVIMIVGGRYSSRLYVAYSVFYTLGSLMAMTV 288
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: D0MRA6_PHYIT (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0MRA6_PHYIT) HSP 1 Score: 223 bits (569), Expect = 1.090e-65 Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAPLFAANTA+ASYLLT E VTKRSS GLLAAAF IVPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+V+TGSM W+ AL YFYMVAAWGGYVFIIN+IPIYV+VM+ AGRY+ RLYIAYSTFY LGS+MAMQV
Sbjct: 160 CVFLAPLFAANTAIASYLLTKE-------VTKRSSAGLLAAAFAGIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVHTGSMFWSAGCALTYFYMVAAWGGYVFIINMIPIYVLVMIFAGRYTPRLYIAYSTFYTLGSLMAMQV 299
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: A0A2D4BYX8_PYTIN (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYX8_PYTIN) HSP 1 Score: 223 bits (568), Expect = 1.950e-65 Identity = 118/147 (80.27%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAP+FAANTA+ASYLLT E VTKRSS GL+AAAF IVPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+V+TGSM W+ ALAYFYMVAAWGGYVFIIN+IPIYV+VM+ AGRYS RLYIAYSTFY LGS++AMQV
Sbjct: 162 CVFLAPVFAANTAIASYLLTKE-------VTKRSSAGLMAAAFAGIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVHTGSMFWSASCALAYFYMVAAWGGYVFIINMIPIYVLVMLFAGRYSPRLYIAYSTFYTLGSLLAMQV 301
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Match: F0W1V7_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1V7_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.870e-65 Identity = 117/147 (79.59%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 1 CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKSVNTGSMMWACLTALAYFYMVAAWGGYVFIINIIPIYVVVMVVAGRYSSRLYIAYSTFYALGSIMAMQV 441
CVFLAPLFAANT +A+YLLT E VTKRSS GL+AAAF IVPSYISRSVGGSYDNEGVAIFALIFVFYLWIK+V+TGSM+W+ AL YFYMVAAWGGYVFIIN+IPIYV+V++VAGRYS RLYIAYSTFYALGS++AMQV
Sbjct: 159 CVFLAPLFAANTTIATYLLTKE-------VTKRSSAGLIAAAFIGIVPSYISRSVGGSYDNEGVAIFALIFVFYLWIKAVHTGSMLWSATCALFYFYMVAAWGGYVFIINMIPIYVLVLLVAGRYSPRLYIAYSTFYALGSVLAMQV 298 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10019.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10019.34.1 >prot_E-fasciculatus_F_contig10019.34.1 ID=prot_E-fasciculatus_F_contig10019.34.1|Name=mRNA_E-fasciculatus_F_contig10019.34.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=153bp CVFLAPLFAANTAVASYLLTTEAREEKRRVTKRSSTGLLAAAFTAIVPSYback to top mRNA from alignment at E-fasciculatus_F_contig10019:648..2343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10019.34.1 ID=mRNA_E-fasciculatus_F_contig10019.34.1|Name=mRNA_E-fasciculatus_F_contig10019.34.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1696bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10019:648..2343+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10019:648..2343+ >mRNA_E-fasciculatus_F_contig10019.34.1 ID=mRNA_E-fasciculatus_F_contig10019.34.1|Name=mRNA_E-fasciculatus_F_contig10019.34.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=918bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10019:648..2343+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |