prot_E-fasciculatus_F_contig1475.3394.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1475.3394.1
Unique Nameprot_E-fasciculatus_F_contig1475.3394.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length466
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1475.3394.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 689 bits (1777), Expect = 2.890e-236
Identity = 418/465 (89.89%), Postives = 422/465 (90.75%), Query Frame = 0 
Query:    1 MESRGFELGVVEYGAAIEAFEQAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGLDGGEEATEAATRQQRGVRRRQDGTGYRDGHGRGGSGDDHSGDGRGVHVSPSPRRNSDGSSGLDERGRGTPETETAAAAEAGVVAWGADAPPLWVDLRRAPVAVIPSAVRRVVRAVEAVGGVTDGLVVQWAGARGASEAEEGEGRAXXXXXXXXXXGAVRAAKTRGKQANAGRRGAVLEAFARVEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR 465
            MESRGFELGVVEYGAAIEAFE+AGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAA XXXXXXXXXXXXXXXXXXXXXX            AAIGL GGEE TEAATRQQRGVRRRQDGTGYRDGHGRGGS DD SGDGR V VSP+ RRN DGSS L ER RGTPETET AA EAGVV WG  APPLWVDLR+APVAVIPSAVRRVV+AVEAVGGVTDGLVVQWAGARGASE        XXXXXXXXXX   RA KTRGK ANAGRRGAVLEAFA VEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR
Sbjct:  714 MESRGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAAXXXXXXXXXXXXXXXXXXXXXXPGRRRVPGAVG-AAIGLGGGEEVTEAATRQQRGVRRRQDGTGYRDGHGRGGSDDDDSGDGRDVPVSPASRRNGDGSSSLGERDRGTPETETTAA-EAGVV-WGTVAPPLWVDLRKAPVAVIPSAVRRVVKAVEAVGGVTDGLVVQWAGARGASEXXXXXXXXXXXXXXXXXX--XRATKTRGKPANAGRRGAVLEAFASVEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR 1173
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1475.3394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNK0_ECTSI2.890e-23689.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 13..45
e-value: 1.6E-5
score: 22.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 1..50
e-value: 6.3E-5
score: 23.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 123..148
e-value: 0.32
score: 11.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 7.289
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 79..109
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 7.728
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..150
score: 6.511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 10.49
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 113..263
e-value: 1.1E-5
score: 27.2
coord: 1..112
e-value: 2.7E-19
score: 71.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1475contigE-fasciculatus_F_contig1475:13351..17831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1475.3394.1mRNA_E-fasciculatus_F_contig1475.3394.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1475 12660..17861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1475.3394.1 ID=prot_E-fasciculatus_F_contig1475.3394.1|Name=mRNA_E-fasciculatus_F_contig1475.3394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=466bp
MESRGFELGVVEYGAAIEAFEQAGKPERGLEMFDEMIAAGVEPDVLCYAA
ATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELW
DLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTD
QAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDP
AAGQTWAAAAAAAAAAAAAAAAYASSGAAAGAAGRRRMPGAGGAAIGLDG
GEEATEAATRQQRGVRRRQDGTGYRDGHGRGGSGDDHSGDGRGVHVSPSP
RRNSDGSSGLDERGRGTPETETAAAAEAGVVAWGADAPPLWVDLRRAPVA
VIPSAVRRVVRAVEAVGGVTDGLVVQWAGARGASEAEEGEGRATGGGGGG
GAGGAVRAAKTRGKQANAGRRGAVLEAFARVEPALGVTEPSNSRGQVRVE
RRELQRWLQEVGTKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat