mRNA_E-fasciculatus_F_contig1475.3394.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1475.3394.1
Unique NamemRNA_E-fasciculatus_F_contig1475.3394.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1475.3394.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 704 bits (1818), Expect = 1.580e-238
Identity = 427/475 (89.89%), Postives = 431/475 (90.74%), Query Frame = 1 
Query:    1 VEDALAIKRSMESRGFELGVVEYGAAIEAFEQAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGLDGGEEATEAATRQQRGVRRRQDGTGYRDGHGRGGSGDDHSGDGRGVHVSPSPRRNSDGSSGLDERGRGTPETETAAAAEAGVVAWGADAPPLWVDLRRAPVAVIPSAVRRVVRAVEAVGGVTDGLVVQWAGARGASEAEEGEGRAXXXXXXXXXXGAVRAAKTRGKQANAGRRGAVLEAFARVEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR 1425
            VEDALAI RSMESRGFELGVVEYGAAIEAFE+AGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAA XXXXXXXXXXXXXXXXXXXXXX            AAIGL GGEE TEAATRQQRGVRRRQDGTGYRDGHGRGGS DD SGDGR V VSP+ RRN DGSS L ER RGTPETET AA EAGVV WG  APPLWVDLR+APVAVIPSAVRRVV+AVEAVGGVTDGLVVQWAGARGASE        XXXXXXXXXX   RA KTRGK ANAGRRGAVLEAFA VEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR
Sbjct:  704 VEDALAIMRSMESRGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTDQAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDPAAGQTWAAAXXXXXXXXXXXXXXXXXXXXXXPGRRRVPGAVG-AAIGLGGGEEVTEAATRQQRGVRRRQDGTGYRDGHGRGGSDDDDSGDGRDVPVSPASRRNGDGSSSLGERDRGTPETETTAA-EAGVV-WGTVAPPLWVDLRKAPVAVIPSAVRRVVKAVEAVGGVTDGLVVQWAGARGASEXXXXXXXXXXXXXXXXXX--XRATKTRGKPANAGRRGAVLEAFASVEPALGVTEPSNSRGQVRVERRELQRWLQEVGTKR 1173
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1475.3394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNK0_ECTSI1.580e-23889.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1475contigE-fasciculatus_F_contig1475:12660..17861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score695.7
Seed ortholog evalue1.5e-197
Seed eggNOG ortholog2880.D7FNK0
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2119
Cds size1398
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927958.45793-UTR-E-fasciculatus_F_contig1475:12659..133501622927958.45793-UTR-E-fasciculatus_F_contig1475:12659..13350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1475 12660..13350 -
1695995767.0393429-UTR-E-fasciculatus_F_contig1475:12659..133501695995767.0393429-UTR-E-fasciculatus_F_contig1475:12659..13350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1475 12660..13350 -
1622927958.5856616-UTR-E-fasciculatus_F_contig1475:17831..178611622927958.5856616-UTR-E-fasciculatus_F_contig1475:17831..17861Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1475 17832..17861 -
1695995767.124861-UTR-E-fasciculatus_F_contig1475:17831..178611695995767.124861-UTR-E-fasciculatus_F_contig1475:17831..17861Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1475 17832..17861 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927958.4703844-CDS-E-fasciculatus_F_contig1475:13350..134101622927958.4703844-CDS-E-fasciculatus_F_contig1475:13350..13410Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 13351..13410 -
1695995767.0570676-CDS-E-fasciculatus_F_contig1475:13350..134101695995767.0570676-CDS-E-fasciculatus_F_contig1475:13350..13410Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 13351..13410 -
1622927958.481489-CDS-E-fasciculatus_F_contig1475:13869..147421622927958.481489-CDS-E-fasciculatus_F_contig1475:13869..14742Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 13870..14742 -
1695995767.0678184-CDS-E-fasciculatus_F_contig1475:13869..147421695995767.0678184-CDS-E-fasciculatus_F_contig1475:13869..14742Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 13870..14742 -
1622927958.4952152-CDS-E-fasciculatus_F_contig1475:15430..155081622927958.4952152-CDS-E-fasciculatus_F_contig1475:15430..15508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 15431..15508 -
1695995767.0769548-CDS-E-fasciculatus_F_contig1475:15430..155081695995767.0769548-CDS-E-fasciculatus_F_contig1475:15430..15508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 15431..15508 -
1622927958.5146651-CDS-E-fasciculatus_F_contig1475:15948..160831622927958.5146651-CDS-E-fasciculatus_F_contig1475:15948..16083Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 15949..16083 -
1695995767.0883784-CDS-E-fasciculatus_F_contig1475:15948..160831695995767.0883784-CDS-E-fasciculatus_F_contig1475:15948..16083Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 15949..16083 -
1622927958.5310204-CDS-E-fasciculatus_F_contig1475:16521..166651622927958.5310204-CDS-E-fasciculatus_F_contig1475:16521..16665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 16522..16665 -
1695995767.098408-CDS-E-fasciculatus_F_contig1475:16521..166651695995767.098408-CDS-E-fasciculatus_F_contig1475:16521..16665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 16522..16665 -
1622927958.5457191-CDS-E-fasciculatus_F_contig1475:17351..174461622927958.5457191-CDS-E-fasciculatus_F_contig1475:17351..17446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 17352..17446 -
1695995767.1068103-CDS-E-fasciculatus_F_contig1475:17351..174461695995767.1068103-CDS-E-fasciculatus_F_contig1475:17351..17446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 17352..17446 -
1622927958.5631614-CDS-E-fasciculatus_F_contig1475:17818..178311622927958.5631614-CDS-E-fasciculatus_F_contig1475:17818..17831Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 17819..17831 -
1695995767.1154501-CDS-E-fasciculatus_F_contig1475:17818..178311695995767.1154501-CDS-E-fasciculatus_F_contig1475:17818..17831Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1475 17819..17831 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1475.3394.1prot_E-fasciculatus_F_contig1475.3394.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1475 13351..17831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1475.3394.1

>prot_E-fasciculatus_F_contig1475.3394.1 ID=prot_E-fasciculatus_F_contig1475.3394.1|Name=mRNA_E-fasciculatus_F_contig1475.3394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=466bp
MESRGFELGVVEYGAAIEAFEQAGKPERGLEMFDEMIAAGVEPDVLCYAA
ATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELW
DLKELMRDIVVDGGGLARPGSSIYVSLIRACGAARRPDLVLRCLAEMNTD
QAPGKSPGTLALEEPYMVSAAIGALSACGETSEADRIYADAIRRRILPDP
AAGQTWAAAAAAAAAAAAAAAAYASSGAAAGAAGRRRMPGAGGAAIGLDG
GEEATEAATRQQRGVRRRQDGTGYRDGHGRGGSGDDHSGDGRGVHVSPSP
RRNSDGSSGLDERGRGTPETETAAAAEAGVVAWGADAPPLWVDLRRAPVA
VIPSAVRRVVRAVEAVGGVTDGLVVQWAGARGASEAEEGEGRATGGGGGG
GAGGAVRAAKTRGKQANAGRRGAVLEAFARVEPALGVTEPSNSRGQVRVE
RRELQRWLQEVGTKR*
back to top

mRNA from alignment at E-fasciculatus_F_contig1475:12660..17861-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1475.3394.1 ID=mRNA_E-fasciculatus_F_contig1475.3394.1|Name=mRNA_E-fasciculatus_F_contig1475.3394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5202bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1475:12660..17861- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGGAGGACGCCTTGGCCATAAAGCGGAGCATGGAGAGCAGGGGTAAGAT
TTCCTTTCGAAGTGGGAGCGGTGGGGGGGGGGGCGGTGCTTCTTCAGTTG
CTCTTGCTCGTACTTTTTTCGTTTTCTTCGCGAGGATGGGGTGGTGCGTG
CATTCGCGTGTGCGTTGGTGGCGATGCCGGCGATGTCGTTCTTGTTTTCG
CAAGTTTAAGGCTCATCTTGTTGTTGATGAAAGCTGCGTCGTAGTAGACG
GCACATTGGCGTTACGGCCGACGCTAGCCGTCGAGTATCGCACGTGGGTG
ACAACCGTATCGGTGGTTTTTATACCCACGATCCTTGTGATTTGTTGCCC
TGCATCTGCTCGCGAACGTGCGTGGGTTTCAACCGCGCGGCGTTCCTGCG
TGTGCTGTGTTGCAGGGTTCGAGCTGGGTGTGGTGGAGTACGGAGCGGCC
ATCGAGGCTTTCGAGCAGGCCGGGAAGCCGGAGAGGGGGCTAGAGATGTT
CGACGAAATGGTCAGTCGTCCCAAGAGACGTTCGTGGCGTGGAAAGGAGA
CGGCGATGTTGAGACTGTTTTTTTTTTTTTTTGACCTTGTTTGTTTTCTT
CTTCAATTCGAAAGTCGCGCTGATTATATTTTTACTTGCATCTTTCGTCA
AGCCTGATCGTTTTACAAGGGACACACTGCTGTTTGCACCTGTACACCTG
TACTGCTATCATCTCCGTCATAGTTTTGGGTTCCTTCCGCCAAGCATGGT
TCGCGCGTACCGTACCCCCCCTCCTGCTCGAGAGTACTGTTGGGCGAAGT
GGATGCTGTAGTTGGTGAGGTTAGCCAAAGACGATCTTGCGAAACGACCC
ATCTGTACGTTCATTTCGTGTCCCGATCAATAGGGCGTGTTACGGTTTTT
CCCTTTGTGTCTTCTCGGCAACAAAACGCTCAAGTCGGTAGCGTTAATCG
GCGCGCGGGAACGCCCGCGTCACCATGATGGATTGGTCGATTCTCGAGTC
TGTTTTTCTTGTTGTACTCGCCGTACTGCTGTTGAACCTTTCTCGATGCG
CCCCTCATGCCAGCCCCAATCTCCCAATTCACACCTCCTCCCCGCTTTTT
CCGGCCCCCGTCCCGATCTCGTCTGTGTGAATCGACCGACTGTAACCGTT
TTCATTCCGAAAAATGGCGGAAATACAAAATGATAACAATGCCTAGATCG
CGGCGGGGGTTGAACCGGACGTGCTGTGCTACGCGGCCGCCACTCGCTGC
TGCTGCCGCCGGTTGGACTGGGCGGGAGCGATCTCGTTCGTGGAGACGAC
GCTGCGGGAAGGCCTGCTCCCCACGGGGAAGACCTTTGAGGTGTGTTGGC
TGTGTTGCAGTGGTATTGTAGTATTTAAGGTGGACAGACACAGCACCCGT
TGCCACCCAAACCATGGCGAGGCCATCTCCTTGTCCATTCTTGTGCTCTC
TCCCTCCCCTTGCCCCCTCTAGCGTCCCTTTCCTCTCTGTCTCTCTGTGT
CTGCCCATGACTGCTGTCACTCCCCACAAGGGTCAGCTGGCCTTGCCCTG
CTGTCTTGTTGTCGTTCTGCCACCCACCTGGTTCGAAACCACCGACGACA
TATATATCCACCGGCTGGGTCTGTAGTATATTGTGCCTGACACATAACCA
AGCTGTATACGTTACCATGTCACTCGTGCTTGCTGCTACCCGTGATTCCC
AAAACCTTGACAACCCTAACCCCTCCCCCCCCCCGGACTTTCCCACCTTA
AAACTACCGCTGACGGCAAAACATGCAGACGGTTGCCGGGCTGTGCAGGA
ACTCGGGCAGGTACGAGGAGCTGTGGGACCTCAAGGAGCTGATGCGTGAC
ATCGTGGTGGACGGGGGCGGGCTGGCGCGCCCGGGATCCTCCATCTACGT
CAGCCTCATCCGGGTGTGTGTATGATCAATAGCACACAGCTACTGTGTAG
ATGGCACACAGCTACTGTGTTGCCCACCACGAAACGGAGCGCGAGCGAGT
GCTCATGTTTTACGTCGTCGCAAAAAAGAAGAAAATATGAATATGTTGTT
TCGGTATGACTCATGCATGCACCGAGAGAAGTTCTTTTGTGTCGACGACC
GGTTTAATTGCTGTGGGATGGGTAGTTGGCCTGTGACCATGGAAGGCGAT
CGCGCTAGTTGGACCGGTATGGATATTAGAAGATACCGAGCAGAGTCCGG
AACGGTCTTGTATGCGAGGGCAACAACGAGGATACTGCTGTATAAACCAT
GAGTCGAAGCGTGTCGCGCGCTGGTTTCGTAGCTATGGCGCCAAAACCAC
TACCCCCTCACCCCTTTACCGCCGTCCCCCCTGCCCTCTCATAACCTCCG
CAGGCTTGCGGTGCCGCGCGGCGGCCTGATCTAGTCCTACGTTGCCTGGC
AGAGATGAACACCGACCAAGCTCCGGGCAAGGTGAATACCCGGGCGCACG
CTGCGTCACCTCTCATTCCCCCGTGCACCGCGGCACGTTTCGCCCTGACT
GTAGTCGGCGCCCTGATTGTCTTCCATGTGTTTTGATCGAAAGCAGGTCG
CCCTACCTGGTACTTTTTCCTTGGCTACGCGTGTGTGTCGCTCTTTTTCC
CTCTTTGTGTGTGCTTGTGTTCATGAGGCGGTTGTTTCGGTTGTTTGTTG
GAATTTTTTCTGCCATTTCTGTTCGTGCATGTGTGTCAGGTCTGAGCCCT
CTCATTCACACGTCTAACCGAAAACCTTGGGGAACCAACCCCCCACCCCC
CCCGCCACTGAAAACGTGGCCCGAGTGTTTTGAGGATGCATGCATGGACA
AGCGTGATTCGATTCGAAGAGTGTGTTGCGGGAAAAAATGGTTGTTTTGT
GGTCTTGTATTCGGCTTTGTCGCCGTTCCACGCGTCCACCATCCAAGCAT
TCTGATGGCATGGTTCAAAATAGCCATATGTTGCTCTCTTTGATGGGCGA
CGCCGCTCGTTCACAATCCACCAAAAATTCATGGCCACCGATGCGGTCCA
TAGTCGTTTTTTTTTTGTCGGAGGATGACCTCCAATGATTTTTATTTTCC
CTTCGACGCTTTCGTGAGAGATGGTCTATTTATCCCTCGTGCTTTTCACA
AAAATCGCCCCCAAATCAGAGCCCGGGAACCCTGGCGCTGGAAGAGCCGT
ACATGGTGTCCGCGGCGATCGGCGCCCTCTCGGCGTGCGGCGAGACCTCG
GAGGCCGACCGAATCTACGCGGACGCCATCCGCCGGCGGATCCTCCCGGA
CCCCGCCGCCGGTCAGACTTGGGCCGCCGCCGCTGCTGCCGCCGCCGCTG
CTGCCGCCGCCGCCGCCGCTTACGCGTCATCGGGGGCGGCCGCTGGCGCG
GCCGGCCGGCGACGAATGCCCGGAGCGGGAGGTGCCGCCATCGGCCTTGA
TGGGGGCGAGGAAGCTACCGAAGCGGCAACCCGTCAGCAGCGGGGGGTGC
GGCGGCGGCAAGACGGGACGGGGTATCGAGATGGCCACGGCAGAGGGGGT
AGCGGTGATGATCATTCTGGCGACGGCAGGGGTGTGCATGTTTCTCCCTC
CCCGCGAAGAAACAGCGACGGCAGCAGTGGCTTGGACGAGCGGGGTAGGG
GTACGCCGGAAACGGAGACAGCGGCGGCGGCTGAAGCGGGGGTGGTGGCA
TGGGGGGCAGACGCGCCGCCGCTCTGGGTGGACCTGAGAAGAGCGCCGGT
GGCGGTGATCCCCTCCGCCGTGCGGAGGGTCGTGAGGGCGGTCGAAGCCG
TGGGCGGCGTCACCGACGGCCTCGTCGTGCAGTGGGCGGGGGCGCGAGGG
GCGAGTGAGGCGGAGGAGGGGGAGGGTAGAGCGACCGGGGGCGGGGGCGG
GGGCGGGGCGGGGGGGGCGGTGAGGGCCGCGAAGACCAGGGGGAAGCAGG
CGAACGCAGGGCGCCGAGGGGCAGTGTTGGAGGCGTTCGCGCGCGTCGAG
CCGGCGTTGGGAGTGACGGAGCCGTCTAACAGTCGAGGGCAGGTATGGAA
AGGAGGCAGAAGTGGAATGGATGAAAAGACGGGTTGGGTAGCGTGTACCA
TGCGCACACCGCCCGTGTTAAAATATTGTTTTTGGTGGATGGATTTGTAC
GGACGGTGTTTTAGAGGTGGCTGTGCTCTCCCTGGCTTGAGGAAGGTAGG
TCACGGTCTGTTCGTCCGTCACTGTTTTGGAGGTGCACGGAGGGGTTGCT
CTGATATTGGTTGACACGTTTGGGGATGTATTCCCCTCTCTCGTCTTTGA
AGGTTGGCTCAGTGTCTTGTGCGTCGAAAATGGTGACGGTCGGTCCAGCA
CAACCTTGGTTCGATGGGCGAGACCTGGGGTTTCTTTGGCACGCTGCTTC
TTGATCTCATCCACAACAAAAGGTGTACCAAAGGTCGTGCGTACAAGCCT
TGATAAGTTTGCCGCGCTATCGCCTTTGACTCTTCTTGTCGCTCGCGTCA
GGTTCGCGTGGAGAGGCGAGAGCTGCAGCGTTGGTTGCAGGAGGTCGGAA
CCAAACGATGATTGATTCAGTCGTTCTCGATTTGTTTGGAGGAAAGAGGT
ATCTCCTCTTCCCGCCTTATGGGAACGGAAGTCCTGGCACTTACCCACCG
CGCTTGAAGTCTTTCTGCCATGACGGAGTCATCCTACATAGGAAAACGCC
GTTGCCACTCGAAGAAATTGGGTGATTAAAACGCGCCGCGGCCCGGGGTT
GCCGTGCCGTATTTCGTCAAATAAATGTCATCGATGGTTCATTGATTCCG
TCTGGTTTGGATTGGTGTTGTTATTTCTGGTCTGATGCACGCGTTGCTAG
CCGTCGATCGTGGTTGGTTTTATCTAGTACTGATACCCAACGTGGGTTCG
CTTTTGTTCCGCCTTCGATGTTGTGAGGTGCATTTCGTTGTCGCAACGCC
ATGGGAGTACAGGCTTCCTTTGTCGGAGCGTCGACAGGAAAAACGACGTT
TTCTGTCGAGCCGGAGCCAGACTGGCCGTCGGTGTGATCAGAGATCAGGA
GGAAGGAGGGGGGCGTCTGTACAATTCTTTGCGCTAAGCGACTTGATTAG
GTGTCCTGTTTCGCGTGCTGGACTTGGGAGTCCGGTGGCGGAGGTGGCGG
CCGGCAGCACTTTGTGGGTTGTCATATTTCCACTTCTGGTTCTGATATTC
CGCAGCAACAGCGAAACAAAAAAATCGAGGTCCTGCAGCAGTATATGTCG
GG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1475:12660..17861-

>mRNA_E-fasciculatus_F_contig1475.3394.1 ID=mRNA_E-fasciculatus_F_contig1475.3394.1|Name=mRNA_E-fasciculatus_F_contig1475.3394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2796bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1475:12660..17861- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGAGCAGGGATGGAGAGCAGGGGGTTCGAGCTGGGTGTGGTGGAGT
ACGGAGCGGCCATCGAGGCTTTCGAGCAGGCCGGGAAGCCGGAGAGGGGG
CTAGAGATGTTCGACGAAATGGGTTCGAGCTGGGTGTGGTGGAGTACGGA
GCGGCCATCGAGGCTTTCGAGCAGGCCGGGAAGCCGGAGAGGGGGCTAGA
GATGTTCGACGAAATGATCGCGGCGGGGGTTGAACCGGACGTGCTGTGCT
ACGCGGCCGCCACTCGCTGCTGCTGCCGCCGGTTGGACTGGGCGGGAGCG
ATCTCGTTCGTGGAGACGACGCTGCGGGAAGGCCTGCTCCCCACGGGGAA
GACCTTTGAGATCGCGGCGGGGGTTGAACCGGACGTGCTGTGCTACGCGG
CCGCCACTCGCTGCTGCTGCCGCCGGTTGGACTGGGCGGGAGCGATCTCG
TTCGTGGAGACGACGCTGCGGGAAGGCCTGCTCCCCACGGGGAAGACCTT
TGAGACGGTTGCCGGGCTGTGCAGGAACTCGGGCAGGTACGAGGAGCTGT
GGGACCTCAAGGAGCTGATGCGTGACATCGTGGTGGACGGGGGCGGGCTG
GCGCGCCCGGGATCCTCCATCTACGTCAGCCTCATCCGGACGGTTGCCGG
GCTGTGCAGGAACTCGGGCAGGTACGAGGAGCTGTGGGACCTCAAGGAGC
TGATGCGTGACATCGTGGTGGACGGGGGCGGGCTGGCGCGCCCGGGATCC
TCCATCTACGTCAGCCTCATCCGGGCTTGCGGTGCCGCGCGGCGGCCTGA
TCTAGTCCTACGTTGCCTGGCAGAGATGAACACCGACCAAGCTCCGGGCA
AGGCTTGCGGTGCCGCGCGGCGGCCTGATCTAGTCCTACGTTGCCTGGCA
GAGATGAACACCGACCAAGCTCCGGGCAAGAGCCCGGGAACCCTGGCGCT
GGAAGAGCCGTACATGGTGTCCGCGGCGATCGGCGCCCTCTCGGCGTGCG
GCGAGACCTCGGAGGCCGACCGAATCTACGCGGACGCCATCCGCCGGCGG
ATCCTCCCGGACCCCGCCGCCGGTCAGACTTGGGCCGCCGCCGCTGCTGC
CGCCGCCGCTGCTGCCGCCGCCGCCGCCGCTTACGCGTCATCGGGGGCGG
CCGCTGGCGCGGCCGGCCGGCGACGAATGCCCGGAGCGGGAGGTGCCGCC
ATCGGCCTTGATGGGGGCGAGGAAGCTACCGAAGCGGCAACCCGTCAGCA
GCGGGGGGTGCGGCGGCGGCAAGACGGGACGGGGTATCGAGATGGCCACG
GCAGAGGGGGTAGCGGTGATGATCATTCTGGCGACGGCAGGGGTGTGCAT
GTTTCTCCCTCCCCGCGAAGAAACAGCGACGGCAGCAGTGGCTTGGACGA
GCGGGGTAGGGGTACGCCGGAAACGGAGACAGCGGCGGCGGCTGAAGCGG
GGGTGGTGGCATGGGGGGCAGACGCGCCGCCGCTCTGGGTGGACCTGAGA
AGAGCGCCGGTGGCGGTGATCCCCTCCGCCGTGCGGAGGGTCGTGAGGGC
GGTCGAAGCCGTGGGCGGCGTCACCGACGGCCTCGTCGTGCAGTGGGCGG
GGGCGCGAGGGGCGAGTGAGGCGGAGGAGGGGGAGGGTAGAGCGACCGGG
GGCGGGGGCGGGGGCGGGGCGGGGGGGGCGGTGAGGGCCGCGAAGACCAG
GGGGAAGCAGGCGAACGCAGGGCGCCGAGGGGCAGTGTTGGAGGCGTTCG
CGCGCGTCGAGCCGGCGTTGGGAGTGACGGAGCCGTCTAACAGTCGAGGG
CAGAGCCCGGGAACCCTGGCGCTGGAAGAGCCGTACATGGTGTCCGCGGC
GATCGGCGCCCTCTCGGCGTGCGGCGAGACCTCGGAGGCCGACCGAATCT
ACGCGGACGCCATCCGCCGGCGGATCCTCCCGGACCCCGCCGCCGGTCAG
ACTTGGGCCGCCGCCGCTGCTGCCGCCGCCGCTGCTGCCGCCGCCGCCGC
CGCTTACGCGTCATCGGGGGCGGCCGCTGGCGCGGCCGGCCGGCGACGAA
TGCCCGGAGCGGGAGGTGCCGCCATCGGCCTTGATGGGGGCGAGGAAGCT
ACCGAAGCGGCAACCCGTCAGCAGCGGGGGGTGCGGCGGCGGCAAGACGG
GACGGGGTATCGAGATGGCCACGGCAGAGGGGGTAGCGGTGATGATCATT
CTGGCGACGGCAGGGGTGTGCATGTTTCTCCCTCCCCGCGAAGAAACAGC
GACGGCAGCAGTGGCTTGGACGAGCGGGGTAGGGGTACGCCGGAAACGGA
GACAGCGGCGGCGGCTGAAGCGGGGGTGGTGGCATGGGGGGCAGACGCGC
CGCCGCTCTGGGTGGACCTGAGAAGAGCGCCGGTGGCGGTGATCCCCTCC
GCCGTGCGGAGGGTCGTGAGGGCGGTCGAAGCCGTGGGCGGCGTCACCGA
CGGCCTCGTCGTGCAGTGGGCGGGGGCGCGAGGGGCGAGTGAGGCGGAGG
AGGGGGAGGGTAGAGCGACCGGGGGCGGGGGCGGGGGCGGGGCGGGGGGG
GCGGTGAGGGCCGCGAAGACCAGGGGGAAGCAGGCGAACGCAGGGCGCCG
AGGGGCAGTGTTGGAGGCGTTCGCGCGCGTCGAGCCGGCGTTGGGAGTGA
CGGAGCCGTCTAACAGTCGAGGGCAGGTTCGCGTGGAGAGGCGAGAGCTG
CAGCGTTGGTTGCAGGAGGTCGGAACCAAACGATGAGTTCGCGTGGAGAG
GCGAGAGCTGCAGCGTTGGTTGCAGGAGGTCGGAACCAAACGATGA
back to top