mRNA_E-fasciculatus_F_contig1475.3392.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: A0A6H5L3R1_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3R1_9PHAE) HSP 1 Score: 1335 bits (3455), Expect = 0.000e+0 Identity = 879/1232 (71.35%), Postives = 922/1232 (74.84%), Query Frame = 1
Query: 988 MATVMHARPDYACLFTAEERDVAQRFEGLSEPSKTLYVRLFQRKGPWFRADGMFAYDEVGSGTPLWVRRRNXXXXXXXXXXXXXXAVGE-----DPTPNAHVSCERRDESTAFVPPPTPFARAVGDRAVSPRADNKSATGMLSVSEDLESESVAIPIELQPDVSHPPEGVCPSTGSPXXXXXXXXVEAAEAVAAEAEXXXXXXXXXXXXXXXSVALTPRELTVLHGEIQSSLQELVEARFLGALPDNVGRTGPGLEAALAAVECCMRSPEIKTLLKRTGGSKKVTPTRPQAGKGSARGHQPACSGSKESRRQGTGAAAXXXXXXXXGGRREMLEELRRRLAGQQTLWGVKSPLVKEIERLISASVEALGVDTATGTRCSGGCSSNTGTGVAGAGMPGKKQRCHWLVAVAGAPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGAGIAGALSSWSPGLSAAFGKTRYASYVCNPQAKAFQ------------------------RREEFLRWEAAVEMRCALDGAMEEIARGRQAAPAAVAAARVADGAESXXXXXXXXXXXXXXXXXXXXXXERRSRTEVLVLDSDGELENVEESFAFPKEESDSLEVKLERIGKEEGRQEVQAEEDGGEEQAEMIRPAVRELEDMIAQFFSEGDDEGRTGLAAXXXXXXXXXXXXXXXXXDPSNSVAVAISFACSRCLHAHLETPAVALSSQVSSSPSGFDGAKKGVRGGMQEDNTLLPLLRGRCGLENAPGEAWTRPVSDTTTEEVDQKGAGTYAGHAERSCSRQQQQQEDGRCGPALLTHAGESRHGESNAASKLLSVTAADCASGGGPTPDFAPVGEQMVAAKGSGTEEGK-EVVSINNGVPEFLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKRTSMLSARAFNKKKVSTSSKTAASQLAPPALLVSDLSSVKSPKRQTLEERTIGYRSGXXXXXXXXXXXXSDDDQDDVFEDPAVERARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SCKHAEKGAAPVMAGTSTRSTNSESSGILNLDGNSGSGGFQAAVGAGGDTRRGGGGIEKKPDPEIAREATATAVVAAAAVARTLRCEGVAELSQVPNLFDDESIAGVVLAATAASEVATAIVGGAENDARVGVPEISITGRRLNREV 4566
M TVM+AR DYA LFTAEERDVAQRFE LSEPSKTLYVRLFQRKGPWFRAD MFAYDEVGSGTPLWVRRRNXXXXXXXXXXXXXX DPTP AHVSCERRDEST F PP TPFA AVG+RA+SPRADNKS G+LSVSE LE E V IP EL D +HPPEGVCPSTGSP E A VAAEAE XXXXXXXXXXXSVALTPRELTVLHGEIQSSLQELVEARFLGALPDNVGRTGPGLEAALAAVECCMRSPEIKTLLKRTGGSKK TPTRPQAGK SAR HQPA SGSK SRRQG GAA+ GGRRE+LEELRRRLAGQQTLWGVKSPLVKEIERLIS SVEALGVDT T TRCSGG SS+TG+ V GAGM GKKQRCHWLVAVAG PQLVFKRALRLMYLTCNTGALSSGRVGAASVRGA I G LSSWSPGLSAAFGKTR + + A + +R +FLRWEAAVE+RCALDGAMEEI+RGRQA PAAVAAARVA G+E XXXXXXXXXXXXXX +RSR EVLV+DSDGELENVEE FAF KEESDSL LERI +EGRQ QA ED GEE+AE+IR AV +LEDMIAQFFSEGDDEGRTG A XXXXXXXXXXXXXXXXDPSN++A AISFACSRCLHAH+ +PAV L SQVSS SGF AK GVRGGM+ED+ L LLR RCGL+ P EAWTRPV + T EEV QK TYAG AER +QQQQEDG+C PALLTH ESRH E+ +L+SVTA ASGG PT DFAPV EQ+ AA GSGTEEGK +VV NN VPEFLLQLEAGWVLASAVWEGV LLERARDYEGAVELL QLLATRYTPHRRGRWWNRLSLDLAHAKRL CALWASQEGLRDPQVRGGDRLALEKR SMLS T G G SDDDQDDVFEDPAVE+AR XXXXXXXXXXXXXXXXXXXXXXXXXX SCKH EK APV A STRS+N ES + NSG KK DPE A E T T A AAVARTLRCEGVAELSQVPNLFDDESI+GVVLAATAASEV IV G END RVGVPEISITGRRLNRE+
Sbjct: 1 MGTVMYARSDYARLFTAEERDVAQRFERLSEPSKTLYVRLFQRKGPWFRADSMFAYDEVGSGTPLWVRRRNXXXXXXXXXXXXXXXXXXXXXXGDPTPKAHVSCERRDESTTFGPPRTPFAPAVGERALSPRADNKSPPGVLSVSEGLEPEGVTIPAELHRDEAHPPEGVCPSTGSPPQPGTTPPAEEAATVAAEAEAEAAXXXXXXXXXXXSVALTPRELTVLHGEIQSSLQELVEARFLGALPDNVGRTGPGLEAALAAVECCMRSPEIKTLLKRTGGSKKGTPTRPQAGKESARCHQPARSGSKHSRRQGAGAASGTAPGAARGGRRELLEELRRRLAGQQTLWGVKSPLVKEIERLISVSVEALGVDT-TATRCSGGGSSDTGSTVVGAGMRGKKQRCHWLVAVAGGPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGARITGTLSSWSPGLSAAFGKTRTRCRIHHCMALPLKSVLDLPPFTPLPANTTLHPLLSSIKRGDFLRWEAAVELRCALDGAMEEISRGRQAGPAAVAAARVAGGSECEEGXXXXXXXXXXXXXXNGRSAGKRSRPEVLVVDSDGELENVEEPFAFRKEESDSLNANLERIKMDEGRQGAQAAEDEGEEEAEVIRSAVSQLEDMIAQFFSEGDDEGRTGRTAAXXXXXXXXXXXXXXXXDPSNAIAAAISFACSRCLHAHVGSPAVTLGSQVSSPSSGFSAAKNGVRGGMEEDDKLSRLLRARCGLDKPP-EAWTRPVREITPEEVGQKRTSTYAGRAERP---RQQQQEDGKCAPALLTHPSESRHHENEPKLRLVSVTAGGVASGGDPTSDFAPVREQVGAATGSGTEEGKGDVVGSNNEVPEFLLQLEAGWVLASAVWEGVALLERARDYEGAVELLTQLLATRYTPHRRGRWWNRLSLDLAHAKRLLCALWASQEGLRDPQVRGGDRLALEKRASMLS--------------------------------------------TSGGNDGGVS---------SDDDQDDVFEDPAVEQARVRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGNVSSSCKHTEKETAPVKADPSTRSSNGESGDVFEQHKNSGXXXXXXXXXXXXXXXXXXXXXXKKADPEAAPETT-TDPAAEAAVARTLRCEGVAELSQVPNLFDDESISGVVLAATAASEVTNIIVDGTENDGRVGVPEISITGRRLNREI 1173
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D7FNK2_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK2_ECTSI) HSP 1 Score: 900 bits (2327), Expect = 4.130e-311 Identity = 525/676 (77.66%), Postives = 551/676 (81.51%), Query Frame = 1
Query: 1768 MRSPEIKTLLKRTGGSKKVTPTRPQAGKGSARGHQPACSGSKESRRQGTGAAAXXXXXXXXGGRREMLEELRRRLAGQQTLWGVKSPLVKEIERLISASVEALGVDTATGTRCSGGCSSNTGTGVAGAGMPGKKQRCHWLVAVAGAPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGAGIAGALSSWSPGLSAAFGKTRYASYVCNPQAKAFQRREEFLRWEAAVEMRCALDGAMEEIARGRQAAPAAVAAARVADGAESXXXXXXXXXXXXXXXXXXXXXXERRSRTEVLVLDSDGELENVEESFAFPKEESDSLEVKLERIGKEEGRQEVQAEEDGGEEQAEMIRPAVRELEDMIAQFFSEGDDEGRTGLAAXXXXXXXXXXXXXXXXXDPSNSVAVAISFACSRCLHAHLETPAVALSSQVSSSPSGFDGAKKGVRGGMQEDNTLLPLLRGRCGLENAPGEAWTRPVSDTTTEEVDQKGAGTYAGHAERSCSRQQQQQEDGRCGPALLTHAGESRHGESNAASKLLSVTAADCASGGGPTPDFAPVGEQMVAAKGSGTEEGK-EVVSINNGVPEFLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKRTSMLS 3792
MRSPEIKTLLKRTGGSKK TPTRPQAGK SARG QPA SGSKESRRQG GAAA GGRREMLEELRRRLAGQQTLWGVKSPLVKEIERLISASVEALGVDT GTRCSGG SS+TG+ V GAGM GKKQRCHWLV VAG PQLVFKRALRLMYLTCNTGALSSGRVGAASVRGAGI GALSSWSPGLSAAFGKTRYASYVCNPQA+AFQ+R++FLRWEAAVE+RCALD AMEEI+RGRQA PAA+A ARVADGAES XXXXXXXXX +RS EVLVLDSDGELENVEESFAF +EES SL KLERI K+EGRQ VQA ED GEE+AEMIRPAV ELEDMIAQFFSE DPSN+VAVAISFACSRCLHAHL +PAV L SQVSSS SGF GAK GV GG++ED+ LL LLR RCGL AP EAWTRPV + T EEV QKG YAG AER +QQQQEDG+CGPALLTH E RH E+ + KL+SVTA ASGG PT DFAPVGEQM AA GSGTEEGK +VV NN VPEFLLQLEAGWVLASAVWEGV LLERARDYE AVELL QLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGL+DPQVRGGDRLALEKR SMLS
Sbjct: 1 MRSPEIKTLLKRTGGSKKGTPTRPQAGKESARGFQPARSGSKESRRQGPGAAARAAPGAARGGRREMLEELRRRLAGQQTLWGVKSPLVKEIERLISASVEALGVDT-IGTRCSGGGSSDTGSAVVGAGMRGKKQRCHWLVTVAGGPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGAGITGALSSWSPGLSAAFGKTRYASYVCNPQARAFQQRDDFLRWEAAVELRCALDRAMEEISRGRQAGPAALATARVADGAESEEGXXXXXXXXXNGSSAG-----KRSWPEVLVLDSDGELENVEESFAFRREESGSLNAKLERIKKKEGRQGVQAAEDEGEEEAEMIRPAVSELEDMIAQFFSE----------------------------DPSNAVAVAISFACSRCLHAHLGSPAVTLGSQVSSSSSGFSGAKNGVGGGVEEDDKLLRLLRARCGLNKAP-EAWTRPVREITPEEVGQKGTD-YAGRAERP---RQQQQEDGKCGPALLTHPSELRHHENESELKLVSVTAGGVASGGDPTSDFAPVGEQMGAATGSGTEEGKGDVVGSNNEVPEFLLQLEAGWVLASAVWEGVALLERARDYENAVELLTQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLKDPQVRGGDRLALEKRASMLS 637
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: A0A7S3VN03_DUNTE (Fanconi-associated nuclease n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VN03_DUNTE) HSP 1 Score: 84.3 bits (207), Expect = 4.550e-13 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 3496 PEFLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
P FL + AGWV+A GV L E+ R+Y A+ +L LL P RRG WW RLS+D+ H K AL A++ L+DP V+ GDRL L++R
Sbjct: 76 PSFLARFSAGWVMAGMATVGVSLAEKERNYSQAIAVLRALLRGSACPGRRGDWWIRLSIDIEHTKDDEAALLAAEAALKDPWVKLGDRLDLQRR 169
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: A0A2T7NFA7_POMCA (Fanconi-associated nuclease n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NFA7_POMCA) HSP 1 Score: 82.8 bits (203), Expect = 3.620e-12 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 3475 VSINNGVPEFLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATR-YTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLAL 3768
V+ + +PEFL AG VL + +G+ +L+R +DY AV L+ +LL+ Y H RG WW+RLSL+L H K+ AL A Q+G+ DP VR G RLAL
Sbjct: 456 VNFDRSLPEFLRSFTAGSVLVRLLNQGIEILQRRKDYTAAVTLIQELLSQHIYNSHMRGYWWDRLSLNLDVHLKQQEEALKAIQDGMDDPLVRSGHRLAL 555
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D8SYS7_SELML (Fanconi-associated nuclease n=8 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SYS7_SELML) HSP 1 Score: 82.8 bits (203), Expect = 3.850e-12 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 3502 FLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
FL + A WV A+ LE+ R Y A+ LL QLL+ +Y P RRG W RLS+DL H +RL +L ++ GL D VRGGDR+AL++R
Sbjct: 434 FLARFSAAWVYATICTVAASFLEKERRYAEAINLLKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRIALQRR 525
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D8TEV7_SELML (Fanconi-associated nuclease n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TEV7_SELML) HSP 1 Score: 82.0 bits (201), Expect = 5.260e-12 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 3502 FLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
FL + A WV A+ LE+ R Y AV LL QLL+ +Y P RRG W RLS+DL H +RL +L ++ GL D VRGGDR+AL++R
Sbjct: 446 FLARFSAAWVHATICTVAASFLEKERRYAEAVNLLKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRVALQRR 537
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D8SXA8_SELML (Fanconi-associated nuclease n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SXA8_SELML) HSP 1 Score: 82.0 bits (201), Expect = 5.680e-12 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 3502 FLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
FL + A WV A+ LE+ R Y AV LL QLL+ +Y P RRG W RLS+DL H +RL +L ++ GL D VRGGDR+AL++R
Sbjct: 318 FLARFSAAWVHATICTVAASFLEKERRYAEAVNLLKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRVALQRR 409
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D3ZVU2_RAT (Fanconi-associated nuclease n=5 Tax=Tetrapoda TaxID=32523 RepID=D3ZVU2_RAT) HSP 1 Score: 82.4 bits (202), Expect = 6.070e-12 Identity = 47/100 (47.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 3484 NNGVPEFLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATR-YTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
+ +P FL GW+ V +LER YE AV+ L LLA + Y P RGRWW+RL+L+L H KRL A+W +EGL DPQVR G RL+L +R
Sbjct: 653 HEALPLFLRCFTVGWIYTRISSRAVEVLERLHMYEEAVKELENLLAQKVYCPDSRGRWWDRLALNLHQHLKRLEEAIWCIKEGLADPQVRTGHRLSLYQR 752
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: UPI000D1C6276 (fanconi-associated nuclease 1 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6276) HSP 1 Score: 82.0 bits (201), Expect = 7.620e-12 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 3502 FLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
FL + A WV A+ LE+ R Y AV LL QLL+ +Y P RRG W RLS+DL H +RL +L ++ GL D VRGGDR+AL++R
Sbjct: 532 FLARFSAAWVHATICTVAASFLEKERRYAEAVNLLKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRVALQRR 623
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Match: D8SYT0_SELML (Fanconi-associated nuclease n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SYT0_SELML) HSP 1 Score: 81.3 bits (199), Expect = 1.140e-11 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 3502 FLLQLEAGWVLASAVWEGVPLLERARDYEGAVELLIQLLATRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKR 3777
FL + A WV A+ LE+ R Y A+ L QLL+ +Y P RRG W RLS+DL H +RL +L ++ GL D VRGGDR+AL++R
Sbjct: 503 FLARFSAAWVYATICTVAASFLEKERRYAEAINLFKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRR 594 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1475.3392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1475.3392.1 >prot_E-fasciculatus_F_contig1475.3392.1 ID=prot_E-fasciculatus_F_contig1475.3392.1|Name=mRNA_E-fasciculatus_F_contig1475.3392.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1473bp MKKRGKLSLPRKHSSRQHQHHHGQRDDADADADTKAGNNDASPTPTFPQSback to top mRNA from alignment at E-fasciculatus_F_contig1475:249..6203- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1475.3392.1 ID=mRNA_E-fasciculatus_F_contig1475.3392.1|Name=mRNA_E-fasciculatus_F_contig1475.3392.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5955bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1475:249..6203- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1475:249..6203- >mRNA_E-fasciculatus_F_contig1475.3392.1 ID=mRNA_E-fasciculatus_F_contig1475.3392.1|Name=mRNA_E-fasciculatus_F_contig1475.3392.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8838bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1475:249..6203- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |