mRNA_E-fasciculatus_F_contig1473.3386.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: D7FRE3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE3_ECTSI) HSP 1 Score: 201 bits (511), Expect = 3.100e-65 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1
Query: 1 MPEGDDKDQMQVAESAAPASEASLVPQQGAPSVAVAEVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSAPPAAN 324
MPEGDDKDQMQVAESAAPASEASLVPQQGAPSVAVAEVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSAPPAAN
Sbjct: 1 MPEGDDKDQMQVAESAAPASEASLVPQQGAPSVAVAEVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSAPPAAN 108
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A7S2GF22_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GF22_9STRA) HSP 1 Score: 105 bits (261), Expect = 8.080e-27 Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 130 KATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSAPPAAN 324
KA E +Q ++N+Q+LPIRAYLDQTVVPILLDGMSALVKERPPNPVEWL YL++NNPQ + AAN
Sbjct: 71 KAAEQVQAKMNLQALPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLATYLIKNNPQGSSAAAN 135
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A7R9Y8P1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8P1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.100e-26 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 91 PSVAVAEVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSA 309
P AV+E + +A +++QDR+N+QSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWL YL++NNPQ +
Sbjct: 34 PPAAVSEAD----QAAQAVQDRMNLQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLAAYLIKNNPQGS 102
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A812XI25_SYMMI (Dpy30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XI25_SYMMI) HSP 1 Score: 101 bits (252), Expect = 2.840e-26 Identity = 49/62 (79.03%), Postives = 57/62 (91.94%), Query Frame = 1
Query: 139 ESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSAPPAAN 324
E+ QD+LN+Q+LPIRAYLDQTVVPILLDGMSALVKERPPNPVEWL YLL++NPQ+ P+AN
Sbjct: 9 EAAQDKLNLQALPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLSTYLLKHNPQN--PSAN 68
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A836CC20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC20_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.040e-25 Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 1
Query: 88 APSVAVAEVESAE---QKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQ 303
AP ++ EVE AE +K E+LQ+RLN+Q+LPIRAYLDQTVVPILLDGM+AL KERPPNPVEWL +YLLRNNPQ
Sbjct: 676 APPISAEEVEDAEKLAEKNAEALQERLNMQTLPIRAYLDQTVVPILLDGMAALAKERPPNPVEWLASYLLRNNPQ 750
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A482SE97_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE97_9ARCH) HSP 1 Score: 97.4 bits (241), Expect = 1.340e-24 Identity = 44/59 (74.58%), Postives = 54/59 (91.53%), Query Frame = 1
Query: 130 KATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQS 306
K E+ Q++LN+Q+LPIRAYLDQTVVP+LLDGMSALVKERPPNP+EWL YLL++NPQ+
Sbjct: 6 KDLEAAQEKLNLQALPIRAYLDQTVVPLLLDGMSALVKERPPNPIEWLAAYLLKHNPQN 64
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A8J2T140_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T140_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.880e-24 Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 130 KATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQSA 309
KA + +Q+ ++VQSLPIRAYLD TVVP+LLDGMSALVKERPPNPVEWL YL++NNPQ +
Sbjct: 44 KANDDVQNAMHVQSLPIRAYLDTTVVPVLLDGMSALVKERPPNPVEWLATYLIKNNPQGS 103
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: H3G5G3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5G3_PHYRM) HSP 1 Score: 96.3 bits (238), Expect = 2.890e-24 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 1
Query: 133 ATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQ 303
A ES+QD++ VQ+LPIRAYLDQTVVPILL GMSALVKERP NP+EWL YL++NNPQ
Sbjct: 1 AAESVQDKVEVQALPIRAYLDQTVVPILLQGMSALVKERPSNPIEWLAGYLIKNNPQ 57
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: G4ZVC7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZVC7_PHYSP) HSP 1 Score: 99.4 bits (246), Expect = 3.120e-24 Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 1
Query: 109 EVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQ 303
EV++AE A ES+QD++ VQ+LPIRAYLDQTVVPILL GMSALVKERPPNP+EWL YL++NNPQ
Sbjct: 91 EVKAAE-PAAESVQDKVEVQALPIRAYLDQTVVPILLQGMSALVKERPPNPIEWLAAYLIKNNPQ 154
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Match: A0A662XX81_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XX81_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 6.030e-24 Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 1
Query: 109 EVESAEQKATESLQDRLNVQSLPIRAYLDQTVVPILLDGMSALVKERPPNPVEWLGNYLLRNNPQ 303
EV+ AEQ A ES+Q+++ VQ+LPIRAYLDQTVVPILL GMSALVKERPPNP+EWL YL++NNPQ
Sbjct: 117 EVKGAEQ-AAESVQEKVEVQALPIRAYLDQTVVPILLQGMSALVKERPPNPIEWLAAYLIKNNPQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1473.3386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1473.3386.1 >prot_E-fasciculatus_F_contig1473.3386.1 ID=prot_E-fasciculatus_F_contig1473.3386.1|Name=mRNA_E-fasciculatus_F_contig1473.3386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=109bp MPEGDDKDQMQVAESAAPASEASLVPQQGAPSVAVAEVESAEQKATESLQback to top mRNA from alignment at E-fasciculatus_F_contig1473:3918..6809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1473.3386.1 ID=mRNA_E-fasciculatus_F_contig1473.3386.1|Name=mRNA_E-fasciculatus_F_contig1473.3386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2892bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1473:3918..6809+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1473:3918..6809+ >mRNA_E-fasciculatus_F_contig1473.3386.1 ID=mRNA_E-fasciculatus_F_contig1473.3386.1|Name=mRNA_E-fasciculatus_F_contig1473.3386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=654bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1473:3918..6809+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |