mRNA_E-fasciculatus_F_contig14725.3382.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: D7FQE9_ECTSI (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE9_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 1.560e-161 Identity = 231/237 (97.47%), Postives = 234/237 (98.73%), Query Frame = 1
Query: 34 KEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
+EYVALLKTVFDFP+LRALLARPDFSFVFDGMHGVAGAYASRVFVDELGA EESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLD+S QPLQGAA DAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK
Sbjct: 217 EEYVALLKTVFDFPTLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGASEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDSSAQPLQGAAADAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 453
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A835Z552_9STRA (Phosphoglucomutase, cytoplasmic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z552_9STRA) HSP 1 Score: 318 bits (816), Expect = 8.250e-103 Identity = 164/236 (69.49%), Postives = 181/236 (76.69%), Query Frame = 1
Query: 34 KEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRN 741
++YV LL+ FDF LRAL+ARPDFS V+D M G AG YA RV V+ELGA LLRC+P EDFGG HPDPNL YA LV RMGL G L AA+ AAEPP GAAADGD DRNM+LGRRFFVTPSDSLAVIAANA A+P+F GL AARSMPTS ALDRV G +FETPTGWKFFGNLMD+K +G PFLCGEESFGTGSDHVREKDGLWAVLAW+S++A RN
Sbjct: 178 EDYVRLLRRTFDFGRLRALVARPDFSMVYDAMSGAAGPYAKRVLVEELGADPACLLRCEPLEDFGGGHPDPNLTYADDLVARMGLAADGSVLP-AAEGAAEPPVFGAAADGDGDRNMVLGRRFFVTPSDSLAVIAANAQAIPHFKD--GLKAAARSMPTSAALDRVGAALGFRVFETPTGWKFFGNLMDSKALGGP-DLAPFLCGEESFGTGSDHVREKDGLWAVLAWLSILAERN 409
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A6V2E419_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2E419_9STRA) HSP 1 Score: 303 bits (775), Expect = 6.450e-100 Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 1
Query: 40 YVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
Y+ L++ FDF +LR R DFS +FDGMHG G +A RV ++ELG PE SLLRCDPR DFGG HPDPNL YA+ LV++MGL+ G + DA PTLGAA DGD DRN+I G FFVTPSDSLA+I N ++P+FA+ GG G ARSMP+S ALD V E +G+P F TPTGWKFFGNLM +KEM + Y PFLCGEESFGTGSDH+REKDGLWAVL+WMS++ N+
Sbjct: 54 YLDALRSCFDFDALRTFCQRDDFSILFDGMHGAGGPFARRVLIEELGLPESSLLRCDPRPDFGGCHPDPNLTYAASLVKKMGLNPDGSADESV--DATSLPTLGAANDGDGDRNLIAGAGFFVTPSDSLALICDNWESIPHFAKEGGPRGVARSMPSSAALDVVAEARGIPCFSTPTGWKFFGNLMSSKEMFGKTDYTPFLCGEESFGTGSDHIREKDGLWAVLSWMSILMKANE 286
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A485LGG1_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=15 Tax=Aphanomyces TaxID=100860 RepID=A0A485LGG1_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.170e-98 Identity = 153/238 (64.29%), Postives = 185/238 (77.73%), Query Frame = 1
Query: 28 AGKEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRN 741
A +++V LLK++FDF +++ALLARPDFSFV+D M GV G YA RVFVDELGAP SL+ EDFGG H DPNL YA L MG+D G + G A EPP GAA DGDADRNMILG RFFVTPSDSLAVIAANA +P+F + GGL G ARSMPTSGA+D V ++ G+ +FE PTGWKFFGNLMD+KE+ ++ Y PF+CGEESFGTGS+H+REKDG+WAVLAW+S++A +N
Sbjct: 671 AAEDHVHLLKSIFDFAAIKALLARPDFSFVYDCMSGVQGPYAHRVFVDELGAPASSLINAVSLEDFGGHHADPNLTYAHELTHVMGVDAKGTAVYG---QAKEPPAFGAACDGDADRNMILGSRFFVTPSDSLAVIAANANVIPFFRKKGGLRGVARSMPTSGAVDLVAQKLGISLFEVPTGWKFFGNLMDSKEVYNKEDYTPFICGEESFGTGSNHIREKDGMWAVLAWLSILASKN 905
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A6V2E453_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2E453_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.890e-98 Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 1
Query: 40 YVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
Y+ L++ FDF +LR R DFS +FDGMHG G +A RV ++ELG PE SLLRCDPR DFGG HPDPNL YA+ LV++MGL+ G + DA PTLGAA DGD DRN+I G FFVTPSDSLA+I N ++P+FA+ GG G ARSMP+S ALD V E +G+P F TPTGWKFFGNLM +KEM + Y PFLCGEESFGTGSDH+REKDGLWAVL+WMS++ N+
Sbjct: 54 YLDALRSCFDFDALRTFCQRDDFSILFDGMHGAGGPFARRVLIEELGLPESSLLRCDPRPDFGGCHPDPNLTYAASLVKKMGLNPDGSADESV--DATSLPTLGAANDGDGDRNLIAGAGFFVTPSDSLALICDNWESIPHFAKEGGPRGVARSMPSSAALDVVAEARGIPCFSTPTGWKFFGNLMSSKEMFGKTDYTPFLCGEESFGTGSDHIREKDGLWAVLSWMSILMKANE 286
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A7R9W9M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9M3_9STRA) HSP 1 Score: 295 bits (755), Expect = 4.220e-98 Identity = 146/231 (63.20%), Postives = 166/231 (71.86%), Query Frame = 1
Query: 52 LKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
L++ FDF L+ R FS ++DGMHG G +A RVF++ELG PE LLRCDPR DFGG HPDPNL YA+ L+++MGL G A DAA P LGAA DGD DRN+I G FFVTPSDSLAVI N A+P+FA GG GG ARSMP+S ALD V E + VP F TPTGWKFFGNLM +KE Y PFLCGEESFGTGSDHVREKDGLWAVLAWMS++ NK
Sbjct: 2 LRSSFDFDKLKEFAKRDGFSLLYDGMHGAGGPFARRVFIEELGLPESCLLRCDPRPDFGGCHPDPNLTYAAALIKKMGLSPDGSADPSA--DAAALPALGAANDGDGDRNLIAGAGFFVTPSDSLAVICDNWEAIPHFASRGGPGGVARSMPSSAALDVVAEARDVPCFVTPTGWKFFGNLMSSKESFDGTDYTPFLCGEESFGTGSDHVREKDGLWAVLAWMSILMKANK 230
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A836CGV2_9STRA (UTP--glucose-1-phosphate uridylyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV2_9STRA) HSP 1 Score: 318 bits (815), Expect = 4.270e-98 Identity = 158/246 (64.23%), Postives = 190/246 (77.24%), Query Frame = 1
Query: 40 YVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPL--QGAADDA----------AEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRN 741
+V+LLK++FDF +++AL+ARPDF+FV+D M GV G YA VFVDELGAP SLL P++DFGG H DPNL YA LV MGL++ G PL +G DA A P GAAADGDADRNMILGRRFFVTPSDS+A+IAA+A A+PYF+ GGL G ARSMPTSGALD V ++ G+ FETPTGWKFFGNLMD+K +G E + PF+CGEESFGTGSDH+REKDG+WAVLAW+S++AH N
Sbjct: 681 HVSLLKSIFDFEAIKALIARPDFTFVYDSMSGVQGPYAKAVFVDELGAPATSLLNATPKDDFGGGHADPNLTYAHDLVASMGLNSKGAPLDPEGNKKDAGCCLPHGAAGAAVPCFGAAADGDADRNMILGRRFFVTPSDSVAIIAAHADAIPYFSAQGGLRGVARSMPTSGALDLVAKKLGLKFFETPTGWKFFGNLMDSKALGGE-DFAPFICGEESFGTGSDHIREKDGMWAVLAWLSILAHYN 925
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: PGMC_BROIN (Phosphoglucomutase, cytoplasmic n=54 Tax=BOP clade TaxID=359160 RepID=PGMC_BROIN) HSP 1 Score: 306 bits (784), Expect = 6.480e-98 Identity = 155/240 (64.58%), Postives = 178/240 (74.17%), Query Frame = 1
Query: 28 AGKEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
+ EYV L+KT+FDF S++ LLA P FSF FDGMHGVAGAYA R+FVDELGA E SLL C P+EDFGG HPDPNL YA LV RMGL + EPP GAAADGDADRNMILG+RFFVTPSDS+A+IAANA ++PYFA GL G ARSMPTS ALD V + + FE PTGWKFFGNLMDA +CGEESFGTGSDH+REKDG+WAVLAW+S++A++NK
Sbjct: 196 SATEYVKLMKTIFDFESIKKLLASPKFSFCFDGMHGVAGAYAKRIFVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSN---------VEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVQSIPYFAS--GLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFGNLMDAGMCS--------VCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNK 416
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A446RS67_TRITD (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=4 Tax=Pooideae TaxID=147368 RepID=A0A446RS67_TRITD) HSP 1 Score: 302 bits (774), Expect = 9.920e-98 Identity = 151/240 (62.92%), Postives = 178/240 (74.17%), Query Frame = 1
Query: 28 AGKEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNK 744
+ +Y+ L+KT+FDF S++ LLA P FSF FDG+HGVAGAYA R+FVDELGA E SLL C P+EDFGG HPDPNL YA LV RMGL + EPP GAAADGDADRNM+LG+RFFVTPSDS+A+IAANA ++PYFA GL G ARSMPTS ALD V + + FE PTGWKFFGNLMDA +CGEESFGTGSDH+REKDG+WAVLAW+S++A++NK
Sbjct: 87 SATDYIKLMKTIFDFESIKKLLASPKFSFCFDGLHGVAGAYAKRMFVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSN---------VEPPEFGAAADGDADRNMVLGKRFFVTPSDSVAIIAANAVQSIPYFAS--GLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFGNLMDAGMCS--------VCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNK 307
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Match: A0A6J1FFU3_CUCMO (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1FFU3_CUCMO) HSP 1 Score: 303 bits (775), Expect = 1.110e-97 Identity = 153/243 (62.96%), Postives = 182/243 (74.90%), Query Frame = 1
Query: 28 AGKEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGL--DTSGQPLQGAADDAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFGNLMDAKEMGHERSYFPFLCGEESFGTGSDHVREKDGLWAVLAWMSVIAHRNKA 747
+ +YV L+K++FDF S+R LL+ P FSF +D +HGVAGAYA R+FV+ELGA E SLL C P+EDFGG HPDPNL YA LV RMGL +SGQ EPP GAAADGDADRNM+LG+RFFVTPSDS+A+IAANA A+PYF+ GGL G ARSMPTS ALD V + + FE PTGWKFFGNLMDA +CGEESFGTGSDH+REKDG+WAVLAW+S++A++NKA
Sbjct: 197 SASDYVKLMKSIFDFESIRKLLSSPKFSFCYDALHGVAGAYAKRIFVEELGAKESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLGKSSSGQ----------EPPEFGAAADGDADRNMVLGKRFFVTPSDSVAIIAANAVEAIPYFS--GGLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFGNLMDAGMCS--------VCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKA 419 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14725.3382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14725.3382.1 >prot_E-fasciculatus_F_contig14725.3382.1 ID=prot_E-fasciculatus_F_contig14725.3382.1|Name=mRNA_E-fasciculatus_F_contig14725.3382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=250bp MVLSAVCTPAGKEYVALLKTVFDFPSLRALLARPDFSFVFDGMHGVAGAYback to top mRNA from alignment at E-fasciculatus_F_contig14725:27..1820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14725.3382.1 ID=mRNA_E-fasciculatus_F_contig14725.3382.1|Name=mRNA_E-fasciculatus_F_contig14725.3382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14725:27..1820- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14725:27..1820- >mRNA_E-fasciculatus_F_contig14725.3382.1 ID=mRNA_E-fasciculatus_F_contig14725.3382.1|Name=mRNA_E-fasciculatus_F_contig14725.3382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1500bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14725:27..1820- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |