prot_E-fasciculatus_F_contig14696.3367.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14696.3367.1
Unique Nameprot_E-fasciculatus_F_contig14696.3367.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length174
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14696.3367.1 vs. uniprot
Match: D8LEJ3_ECTSI (Methyltranfer_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ3_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 6.190e-31
Identity = 70/101 (69.31%), Postives = 73/101 (72.28%), Query Frame = 0 
Query:   41 AMRAAGAPPAFRHLRALCNYPEGRFSAWLERLVLDPSDDXXXXXXXXXXXXXXXXXXXPRPRPGRRLGGYDADDLPTSSLTTTSLAELGITYAAATWNTPR 141
            AMRAAGAPPAFRHLRALCNYPE RFSAWLER+VLD  D                     RPRPGRRLGG DADD PTSSL+TTSLAELG+TYAAAT N PR
Sbjct:  535 AMRAAGAPPAFRHLRALCNYPEDRFSAWLERIVLDADDSSSPATASSAVSPS-------RPRPGRRLGG-DADDPPTSSLSTTSLAELGLTYAAATMNAPR 627
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14696.3367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEJ3_ECTSI6.190e-3169.31Methyltranfer_dom domain-containing protein n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 2..34
e-value: 9.3E-6
score: 35.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14696contigE-fasciculatus_F_contig14696:1026..3129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14696.3367.1mRNA_E-fasciculatus_F_contig14696.3367.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14696 423..3242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14696.3367.1 ID=prot_E-fasciculatus_F_contig14696.3367.1|Name=mRNA_E-fasciculatus_F_contig14696.3367.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=174bp
MRKVVERSPALLCLSVEHNLEPKLAFLVNELGLDPGSVRKAMRAAGAPPA
FRHLRALCNYPEGRFSAWLERLVLDPSDDSSSSSSPAATASSAAASSPPR
PRPGRRLGGYDADDLPTSSLTTTSLAELGITYAAATWNTPRRRRAAAAAT
GGASGEEAAEQREAFFFPPEERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF