mRNA_E-fasciculatus_F_contig1469.3365.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1469.3365.1 vs. uniprot
Match: D7FJ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ51_ECTSI) HSP 1 Score: 1895 bits (4909), Expect = 0.000e+0 Identity = 1209/1578 (76.62%), Postives = 1247/1578 (79.02%), Query Frame = 1
Query: 1 VQHPLSPRRGSHAASAAGIGXXXXXXXE---HGEDGPSGFGKRGNAANKNTWSDVVQGARNGLARFASPLASSRWQVKRTAVRGCVMVLSALQNASSLSSQAADERVGCLDVNKARRVVTRAVRMLPAEPNGKGAAGPSSESAALAVPQRPYWAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQVMPAEVLSVSVKQAKQGGLEKSRHRTRFSRTPSXXXXXXXXXXXXXXXXXXXXXTSPAAFFGKPGTDGNRPPRASDTTATLVSGKGKAASLSLAEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEAAFGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDAVRLNQGDACGLWPRAGKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELGREGAGDDAEAAPFLLSVCVCGLLAAEEGLVRRRLGGTSRRHGRSFLGSPSSDFANSSRGATGXXXXXXXXXXXXXXXXXXDEGLMAEDASLMFLTAIRQGTRAAAHVCLFSRPELLGSPSSLDTPKTPSVQEIGPENGADMGEVDVSSPTESPDSGSATGVPVSMVVRAVRTLSSPPFLQRVGDSEA--LRGGRRDADNKCPLRLQLAAISALRELLSSKGGGYVMRATAAMTAAAGREVDSKTQEVEEEACESDAEPLALWEALMGGVVGGVNANIPAAFELP---GEDTGNTEPNSLFSAPSTPAQIDGATFTAEFPSDESSGNSAPGMVSNPPVSAGADGAAATAAAKAFAAEVDKSKSSSAGEETAVVVSAALLPLLTRLVPLCPPPRLSSTLPSLLLLSVRLLGAESGRVLGXXXXXXXXXXXXXXAGGS--GDAAKGLSSTPEAKAAVDFVRSCVREVWRHGDVQQXXXXXXXXXXXXXXXXGARAPGSPQDDVEGAEAVASEGGGAGVPETGSVSTAPGPDGGAEVVEGSGVVAKDKEGDDXXXXDWGDXXFQGXXXXXXXXXXXXXXASSPPAVNDDPAAAVAAGSVPDAEDAASEAPVGKTEAAAESGEIGVRSDESSGEGKDENETGLEEAQVVQDKDDAPSSSHDGEEDGDASAPEDRVNRCAHNDTEDDNEGEADETKAVVQVPADPNDVGKDESSQEISATAGAPVAAXXXXXXXXXXXXXXXESADAPACVDPQDDAASKPENGSTEDVPVASPPPAVPDALNLLLGAGRAVNELLTFLLGGEGATTERAAAIGAAAEAWGAVALMIPQEADGLAGPLREALTSPTEKCSVSTRLALLHAVAVTVKAAVGEEDGAAAEQAEADGGAYRKAAASALMRLLAPHALAGLRLEVDRAAA-GSAAGGGSVGGVVDEEPREACLLEGVSLSQLAFKAAPPASHGPLLGLLLPLYASALALNLPMLGATIGQALLLVARSSAAAFKEAVAYVAAGERQALEGAVRAAMMGRGAPVAGGDAGGRGGGSGSRMSGRKLDLSQYSTRG 4701
VQHPLSPRRGSH ASAAG+GXXXXXXX HGEDG S FGKR NAAN+N+WS+VVQGARNGLARFASPLASSRWQVKRTAVRGCVMVLSALQN SS QAADERVGCLDVNKARRVVTRAVRMLPAE NGK AGPS ESAAL PQRP+WAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVRE +A SLS AEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEA+FGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDAVRLNQGDACGLWPRAGKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAEL REG GDDAEAAPFLLSVCVCGLLAAEEGLVRRRLGGTSRRHGRSFLGSP ++FAN SRG TG XXXXXXXXXXX DEGLMAEDASLMFLTAIR CLFSRPELLGSPS D KTPS+QEIGPENGA MGEVDV SP+ESPDSGSA GVPVSMVVRAVRTLSSPPFLQRVGDSEA ++ GRRD D+KCPLRLQLAAISAL ELLSSKGG YVMRATAA TAA GR+ +SKTQE EEEA ESDAEP ALWEALMGGVVGGVNANIPAAF+LP GE+TGNTEPNSL +A STPAQI GATFTAEFPSD+S N APGMVSNPPVSAGADGAAA AAAKAFAAEVDKSKSSSAGEE V+VSAALLPLL RLVPLCP PRLSSTLPSLLLLSVRLLGAESGRVLG XXXXXXXX GDAAKGLSSTPEAKAAVDFVRS VREVWRHG+VQQ ARAPG PQ DVEGAEAV S G GA VPETGSVSTAPGPD GAE+VEGSGVVA D++GD+ XXX XX XXXXXXXXXXXXXX EGK+E+ET EEA VVQ KDDAPSS+ DGEEDG ASA ED +R AHNDT GEA+E K V+Q PADP+DVG DE SQE SA XXXXXXXXXX ESADAPACVD QDD A+ PENGSTEDVPVASPPPAVPDALNLLLGAGRAVN LL FLLGGEGATTERAAAIGAAAEAWGAVAL IPQEADGLAGPLREALTS TEKCSVSTRLALLHAV VTVKAA GE+DGAAA QAEADGGAYRKAAA+ALMRLLAPHALAGLRLEVDRAAA +VGGV DEEPREACLLEGV L+QLAFKAAP ASHGPLLGLLLPLYASALALNLPMLGATIGQALLLVARSSA AFKEAVAYVA GERQALEGAVRAAMMGRGAPVAGGDAGGRGGGSGSRMSGRKLDLSQYSTRG
Sbjct: 305 VQHPLSPRRGSHPASAAGMGXXXXXXXXXXXHGEDGRSDFGKRSNAANRNSWSEVVQGARNGLARFASPLASSRWQVKRTAVRGCVMVLSALQNGSS---QAADERVGCLDVNKARRVVTRAVRMLPAEFNGKDGAGPSCESAALTAPQRPFWAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVRED----------------------------------------------------------------------------------------------------QAGSLSQAEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEASFGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDAVRLNQGDACGLWPRAGKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELAREGGGDDAEAAPFLLSVCVCGLLAAEEGLVRRRLGGTSRRHGRSFLGSPGNEFANGSRGVTGGGSLAGXXXXXXXXXXX-DEGLMAEDASLMFLTAIR---------CLFSRPELLGSPSPTDNSKTPSIQEIGPENGAGMGEVDVGSPSESPDSGSAIGVPVSMVVRAVRTLSSPPFLQRVGDSEAGSVKEGRRDEDDKCPLRLQLAAISALGELLSSKGGEYVMRATAATTAA-GRDGNSKTQEAEEEAGESDAEPFALWEALMGGVVGGVNANIPAAFDLPLPPGEETGNTEPNSLSAASSTPAQIGGATFTAEFPSDDSRSNGAPGMVSNPPVSAGADGAAANAAAKAFAAEVDKSKSSSAGEEATVMVSAALLPLLARLVPLCPLPRLSSTLPSLLLLSVRLLGAESGRVLGVAAGSAXXXXXXXXXXXXXXGDAAKGLSSTPEAKAAVDFVRSSVREVWRHGNVQQRQEAGPGEV--------ARAPGPPQGDVEGAEAVVSAGRGAAVPETGSVSTAPGPDEGAEIVEGSGVVANDEDGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------XXXXXXXXXXEGKEESETWQEEAPVVQHKDDAPSSNKDGEEDGYASAAEDGADRSAHNDTXXXXXGEANEAKEVLQEPADPDDVGNDEGSQETSAAXXXXXX--XXXXXXXXXXTTRAESADAPACVDSQDDGATTPENGSTEDVPVASPPPAVPDALNLLLGAGRAVNGLLAFLLGGEGATTERAAAIGAAAEAWGAVALTIPQEADGLAGPLREALTSSTEKCSVSTRLALLHAVIVTVKAAAGEDDGAAAGQAEADGGAYRKAAATALMRLLAPHALAGLRLEVDRAAAVAXXXXXXNVGGVADEEPREACLLEGVHLAQLAFKAAPQASHGPLLGLLLPLYASALALNLPMLGATIGQALLLVARSSAGAFKEAVAYVATGERQALEGAVRAAMMGRGAPVAGGDAGGRGGGSGSRMSGRKLDLSQYSTRG 1729
BLAST of mRNA_E-fasciculatus_F_contig1469.3365.1 vs. uniprot
Match: A0A6H5K5D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D2_9PHAE) HSP 1 Score: 1774 bits (4596), Expect = 0.000e+0 Identity = 1109/1359 (81.60%), Postives = 1147/1359 (84.40%), Query Frame = 1
Query: 364 MLPAEPNGKGAAGPSSESAALAVPQRPYWAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQVMPAEVLSVSVKQAKQGGLEKSRHRTRFSRTPSXXXXXXXXXXXXXXXXXXXXXTSPAAFFGKPGTDGNRPPRASDTTATLVSGKGKAASLSLAEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEAAFGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDAVRLNQGDACGLWPRAGKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELGREGAGDDAEAAPFLLSVCVCGLLAAEEGLVRRRLGGTSRRHGRSFLGSPSSDFANSSRGATGXXXXXXXXXXXXXXXXXXDEGLMAEDASLMFLTAIRQGTRAAAHV------------CLFSRPELLGSPSSLDTPKTPSVQEIGPENGADMGEVDVSSPTESPDSGSATGVPVSMVVRAVRTLSSPPFLQRVGDSEA--LRGGRRDADNKCPLRLQLAAISALRELLSSKGGGYVMRATAAMTAAAGREVDSKTQEVEEEACESDAEPLALWEALMGGVVGGVNANIPAAFELP---GEDTGNTEPNSLFSAPSTPAQIDGATFTAEFPSDESSGNSAPGMVSNPPVSAGADGAAATAAAKAFAAEVDKSKSSSAGEETAVVVSAALLPLLTRLVPLCPPPRLSSTLPSLLLLSVRLLGAESGRVLGXXXXXXXXXXXXXXAGGSG---DAAKGLSSTPEAKAAVDFVRSCVREVWRHGDVQQXXXXXXXXXXXXXXXXGARAPGSPQDDVEGAEAVASEGGGAGVPETGSVSTAPGPDGGAEVVEGSGVVAKDKEGDDXXXXDWGDXXFQGXXXXXXXXXXXXXXASSPPAVNDDPAAA-VAAGSVPDAEDAASEAPVGKTEAAAESGEIGVRSDESSGEGKDENETGLEEAQVVQDKDDAPSSSHDGEEDGDASAPEDRVNRCAHNDTEDDNEGEADETKAVVQVPADPNDVGKDESSQEISATAGAPVAAXXXXXXXXXXXXXXXESADAPACVDPQDDAASKPENGSTEDVPVASPPPAVPDALNLLLGAGRAVNELLTFLLGGEGATTERAAAIGAAAEAWGAVALMIPQEADGLAGPLREALTSPTEKCSVSTRLALLHAVAVTVKAAVGEEDGAAAEQAEADGGAYRKAAASALMRLLAPHALAGLRLEVDRAAAGSAAGGGSVGG--VVDEEPREACLLEGVSLSQLA 4371
MLP E NGK AGPSSES ALAVPQRPYWAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLT VARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQVMPAEVLSVS KQAKQGGLEK+RHRTR SRTPS TSPA+FFGK GTDGNRP RASDTTAT VS K KAAS S AEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEA+FGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDA GDACGLWPRA KLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELGREGAGDDAEAAPFLLSVC+CGLLAAEEGLVRRRLGGTSRRHGRSFLGSP +DFAN SRG TG XXXXXXXXXXXXXXXX DEGLMAEDASLMFLTAIRQG AAA V CLFSRPELLGSPS D KT S QEIGPENGADMGEVDV S TESPDSGSATGVPVSMV+RAVRTLSSPPFLQRVGDSEA ++GG RDAD KCPLRLQLAAISAL LLSSKGG YVMRATAAMTAA GR+VDSKTQEVEE A ESD EPLALWE LMGGVVG VNANIPAAF+LP GE+TGNT PNSL A STPAQI GATFTAEFPSD+S+ N APGMVSNPPV AGADGAAA AAAKAFAAEVDK KSSSAGEE AV+VSAALLPLL+RLVPLCPPPRLSSTLPSLLLLSVRLLGAESGRVLG XXXXXXXX DAAKGLSSTPEAKAAVDFVRSCVREVWRHGD+QQ A G PQ D+EGAEAV S GGGA VPETGSVSTAPGPDGGAE+VEGSGVVA D++GDD DWGDXXFQG XXXXXXXXX SSPP+VNDDPAAA VAAGSVP EDAASEA VGK E AAESGE+ VR ++SSG+GK+E+ET EEA VVQDKDDAPS+++DGEED ASA ED V+R AHNDTED+ E E TK V+ P DP+ VG DESSQE XXXXXXXXXXXXX ESADAPACVD QDD A+ PENGST DVP+ASPPPAVPDALNLLLGAGRAVNELLTFLLGGEGATTERAAAIGAAAEAWGAVAL IPQEADGLAGPLREALTSP EKCSVSTRLALLHAV VTVKAA GE+DGAAA QAEADGGAYRKAAASALMRLLAPHALAGLRLEVDRAA V DEEPREACLLEGV L+QLA
Sbjct: 1 MLPTESNGKDGAGPSSESVALAVPQRPYWAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTVVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQVMPAEVLSVSAKQAKQGGLEKTRHRTRLSRTPSPRWRGTASGSSPSPARGGG--TSPASFFGKTGTDGNRPLRASDTTATPVSDKDKAASSSQAEAEALRLKEAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEASFGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDA-----GDACGLWPRADKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELGREGAGDDAEAAPFLLSVCLCGLLAAEEGLVRRRLGGTSRRHGRSFLGSPGNDFANGSRGVTGGXXXXXXXXXXXXXXXX-DEGLMAEDASLMFLTAIRQGKGAAADVLDATFYRKRWLLCLFSRPELLGSPSPTDNSKTLSAQEIGPENGADMGEVDVGSSTESPDSGSATGVPVSMVIRAVRTLSSPPFLQRVGDSEAGSVKGGSRDADYKCPLRLQLAAISALGALLSSKGGEYVMRATAAMTAA-GRDVDSKTQEVEEGAGESDPEPLALWEGLMGGVVGAVNANIPAAFDLPLPPGEETGNTVPNSLSVASSTPAQIGGATFTAEFPSDDSTSNGAPGMVSNPPVIAGADGAAANAAAKAFAAEVDKDKSSSAGEEAAVMVSAALLPLLSRLVPLCPPPRLSSTLPSLLLLSVRLLGAESGRVLGVAAGSAXXXXXXXXXXXXXXXEDAAKGLSSTPEAKAAVDFVRSCVREVWRHGDIQQRQEAGPGEV--------AHGLGPPQGDIEGAEAVPSAGGGAAVPETGSVSTAPGPDGGAEIVEGSGVVANDEDGDDD---DWGDXXFQGAEXXXXXXXXXLQEDSSPPSVNDDPAAAAVAAGSVPAVEDAASEASVGKAEVAAESGEVRVRRNDSSGKGKEESETWQEEAPVVQDKDDAPSNNNDGEEDEHASAAEDGVDRSAHNDTEDETENE---TKDVLHAPVDPDGVGNDESSQEXXXXXXXXXX-XXXXXXXXXXXXXPAESADAPACVDSQDDDATTPENGSTGDVPIASPPPAVPDALNLLLGAGRAVNELLTFLLGGEGATTERAAAIGAAAEAWGAVALTIPQEADGLAGPLREALTSPAEKCSVSTRLALLHAVVVTVKAAAGEDDGAAAGQAEADGGAYRKAAASALMRLLAPHALAGLRLEVDRAAXXXXXXXXXXXXXXVADEEPREACLLEGVHLAQLA 1335
BLAST of mRNA_E-fasciculatus_F_contig1469.3365.1 vs. uniprot
Match: A0A835Z1V0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V0_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.320e-27 Identity = 150/481 (31.19%), Postives = 178/481 (37.01%), Query Frame = 1
Query: 460 PALLCLYLEDLVTLACAAATASTDDS----------------------------------------------------------------ELLELQEAGVMMLTEVAR----------------TFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQVMPAEVLSVSVKQAKQGGLEKSRHRTRFSRTPSXXXXXXXXXXXXXXXXXXXXXTSPAAFFGKPGTDGNRPPRASDTTATLVSGKGKAASLSLAEAEALRLK---EAVEASYRPAVSAVYGMHVPLAERAARLQCLAALRLVAGGEDEAAFGGGSGSGAVIPDSVRRGLMDALKEHLKVLGLHWLANVKDAVRLNQGDACGLWPRA-GKLNIGAGLTYPPGVKPSLAKGPLKGRWPVMAAAAAAELGREGAGDDAEAAPFLLSVCVCGLLAAEEG 1650
P LCLYLEDL++ A AATASTDDS EL ELQ GV +L E + T AQ PD D D G ALE S+SQ+ AARPAL C V P L RGC LV+ LVREGLV D VVL+RLVRQV+PAE+L S K + G + A E +RL +A A R S YG V L ER RL+ LAAL L + G A+ RR L DA++EH L L W+A DA R+ QG WP+ G L GL Y PG++ +G L G+W AAAAA A D + FLLS CVC L A +G
Sbjct: 1897 PPYLCLYLEDLLSTAITAATASTDDSAVLMLGGSENQLAALVCGAAADFNTLSRAQALLRSCRLCSKPTALLTHMCALSTGVAVHDGGGSELHELQAGGVDLLLEALQAYANAHTYNRIAASCDTIAQAPDPDADASG------------ARALEQSVSQMASAARPALACGVWPPLLTRGCRLVLALVREGLVTDVVVLRRLVRQVVPAELLRRSGKTFQAHGARRD-----------------------------------------------------------------------AAEEEMRLGSVGDAWTADVRVPPSECYGACVALEERVTRLRVLAALALESSGGSAHAW--------------RRALSDAMEEHTPALRLSWVALCADAARVAQGIEG--WPQVDGVLQRSTGLLYGPGIRLRQLRGVLLGQWEACAAAAAEPC---NAARDVRSCRFLLSACVCALRALADG 2275 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1469.3365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1469.3365.1 >prot_E-fasciculatus_F_contig1469.3365.1 ID=prot_E-fasciculatus_F_contig1469.3365.1|Name=mRNA_E-fasciculatus_F_contig1469.3365.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1568bp VQHPLSPRRGSHAASAAGIGGGGEDEEEHGEDGPSGFGKRGNAANKNTWSback to top mRNA from alignment at E-fasciculatus_F_contig1469:7830..17291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1469.3365.1 ID=mRNA_E-fasciculatus_F_contig1469.3365.1|Name=mRNA_E-fasciculatus_F_contig1469.3365.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9462bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1469:7830..17291- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1469:7830..17291- >mRNA_E-fasciculatus_F_contig1469.3365.1 ID=mRNA_E-fasciculatus_F_contig1469.3365.1|Name=mRNA_E-fasciculatus_F_contig1469.3365.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=9408bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1469:7830..17291- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |