mRNA_E-fasciculatus_F_contig14685.3360.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14685.3360.1
Unique NamemRNA_E-fasciculatus_F_contig14685.3360.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: D8LFS7_ECTSI (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS7_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 5.440e-172
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 1
Query:   16 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAII GSTAATLP+HNE+LHVWHLYA GGLCPALMALLVRGYV FFGNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSL+MSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK
Sbjct:  143 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAII-GSTAATLPMHNESLHVWHLYAAGGLCPALMALLVRGYVLFFGNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSLIMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 410          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A7S3JRE1_9STRA (ADP,ATP carrier protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRE1_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.760e-59
Identity = 124/280 (44.29%), Postives = 171/280 (61.07%), Query Frame = 1
Query:   16 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFF-----------GNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            LFY +G  Y +LF+++   L     G+ N    P R++GW ++ AIESYGSLAVALFWAFTNA++DLE+AK+SYGL++A AQ+GAI  GST AT        H+  L+ +GG    L+  +VRGY  FF             N  ++    ++  V    +G+ LVLRH YV  L  IS LYEV+LT+LD++MK++G    R +  +   E  A LMGHFGQT N++S + SL G S  VR LGL  TL +FP LL+V  + ++ +P L  LF+  A+LK
Sbjct:   90 LFYAIGFTYFILFVILGGCLAHRSFGMENTSPDPHRLLGWFTYFAIESYGSLAVALFWAFTNASIDLESAKSSYGLIVAFAQLGAIF-GSTLATKA---SAFHISFLFVLGGSSCLLVCAMVRGYEIFFMIPAQILPAHPSENTTQQSANKIRSNVH-LFDGISLVLRHGYVTSLLAISTLYEVILTVLDFEMKIIG--RARYSTDERGAEQFAELMGHFGQTVNTISFIFSLAGFSYVVRRLGLSITLLVFPFLLIVGTLVTYASPGLWTLFITTALLK 362          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A8J6CDP2_DIALT (ADP,ATP carrier protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDP2_DIALT)

HSP 1 Score: 201 bits (512), Expect = 1.110e-57
Identity = 123/272 (45.22%), Postives = 171/272 (62.87%), Query Frame = 1
Query:   16 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRER-LTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEM--FRETAGDEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            LFYIL   Y  LFL ++L L    +GL N  T P+R++GWVS+ AIES+GS+ V+LFW+F N+TV LE AKASYGL+IAGAQIGAI+      TL + + +L V +LYA GGL   ++ +L+R +V  +G   P+   +          + G+ L+ RH YVA +F I+CL+EVV+T+LD++MKV+      + +TA        A  MG FGQ TNS+SL  SL GTS  +R LGL  TL +FP +L+  +   F APSL+  F A+  +K
Sbjct:  137 LFYILSVVYGALFLSIALALHMPGVGLDNTQTDPSRLIGWVSYCAIESFGSIFVSLFWSFVNSTVSLEHAKASYGLIIAGAQIGAILG----PTLAVMSSSLGVANLYAFGGLVVGMVWVLMRKFVALYGTGTPKAAAMPGKDKGAPGLVEGVYLLGRHPYVAGIFFITCLFEVVVTVLDFEMKVIAKAQPEYADTAA------FARFMGFFGQATNSVSLFFSLVGTSFVIRRLGLASTLLLFPLMLMTVLSYVFIAPSLNVFFCALVTVK 398          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A835YYY6_9STRA (ADP,ATP carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.190e-56
Identity = 123/286 (43.01%), Postives = 167/286 (58.39%), Query Frame = 1
Query:    4 PPRQLFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVD----------SALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEA---DEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            P  +LFYI+G  Y L F ++S +L    +GLAN    P R++GWVS+ AIES+GS+ V+LFWAF N+T++ E AK++YGL+IAGAQ+G+I+  S AAT   +   + V  LY +G L  ALM  +V GYV  FG      +     G               L G  L +R+ YV  +F +SCL+ V +TILDY MKVL    F      +A    +H A+ MG FGQ TN +S   SL GTS+ +R LGLR+TL  FP+L V  V+    AP L  +F+A+  LK
Sbjct:   98 PKHRLFYIVGGFYALAFGVISALLADPVVGLANTKADPTRLLGWVSYCAIESFGSICVSLFWAFVNSTMNFEGAKSAYGLIIAGAQVGSILGPSIAAT---YATTIGVARLYGLGALAMALMVAMVWGYVRRFGVPASLAKPAGGAGXXXXXXXXXXXXAGVLEGFHLFMRYAYVRGIFALSCLFMVEVTILDYTMKVLAKGTFDARYPGDATASSQHFAAFMGFFGQVTNGISFAFSLLGTSMVIRRLGLRRTLLAFPSLCVCVVLAVMAAPRLETVFLAMITLK 380          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A7S4ED78_9STRA (ADP,ATP carrier protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED78_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.100e-54
Identity = 125/287 (43.55%), Postives = 168/287 (58.54%), Query Frame = 1
Query:   16 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVD------------------SALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            LFY++G  YTL+F+++  +L    +G+ N    P R+VGW S+ A+ESYGSL VALFWAFTNA+VD + A++SYGLV+A AQ+GA+  GS  AT       LH+  LY +GG   AL+  +V  + ++F    P+     V   VD                     +GL LVLRH YV  L  IS LYE+VLT+LD++MK++G    R  A     E  A LMG FG   NS+S L SL   S  VR LG+R TL +FP L +VA + ++  PSL  LF+A A+LK
Sbjct:   94 LFYLIGGAYTLIFIVIGGLLAHETIGMRNTTPDPRRLVGWFSYFAVESYGSLMVALFWAFTNASVDADTAESSYGLVVAFAQLGAV-GGSALAT---QARRLHISFLYVLGGCSCALVCGMVALFEYYFAEE-PQTEARRVASAVDXXXXXXXXXXXXXVEKKAGLFDGLDLVLRHSYVFNLLMISTLYEIVLTVLDFEMKIVG--RARYGADGRGAEEFARLMGQFGILVNSVSFLFSLVLFSYVVRSLGVRSTLLVFPVLCLVATLLAYGFPSLWTLFIATALLK 373          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A8J2S4J6_9STRA (ADP,ATP carrier protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4J6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.600e-52
Identity = 125/287 (43.55%), Postives = 168/287 (58.54%), Query Frame = 1
Query:   16 LFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVD------------------SALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            LFY++G  YTL+F+++  +L    +G+ N    P R+VGW S+ A+ESYGSL VALFWAFTNA+VD + A++SYGLV+A AQ+GA+  GS  AT       LH+  LY +GG   AL+  +V  + ++F    P+     V   VD                     +GL LVLRH YV  L  IS LYE+VLT+LD++MK++G    R  A     E  A LMG FG   NS+S L SL   S  VR LG+R TL +FP L +VA + ++  PSL  LF+A A+LK
Sbjct:  717 LFYLIGGAYTLIFIVIGGLLAHETIGMRNTTPDPRRLVGWFSYFAVESYGSLMVALFWAFTNASVDADTAESSYGLVVAFAQLGAV-GGSALAT---QARRLHISFLYVLGGCSCALVCGMVALFEYYFAEE-PQTEARRVASAVDXXXXXXXXXXXXXVEKKAGLFDGLDLVLRHSYVFNLLMISTLYEIVLTVLDFEMKIVG--RARYGADGRGAEEFARLMGQFGILVNSVSFLFSLVLFSYVVRSLGVRSTLLVFPVLCLVATLLAYGFPSLWTLFIATALLK 996          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A7S2B3P9_9STRA (ADP,ATP carrier protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3P9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.120e-51
Identity = 117/279 (41.94%), Postives = 160/279 (57.35%), Query Frame = 1
Query:    4 PPRQLFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFG---NNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDE---ADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            P  QLFYI+G  Y   F +++L L    LG+AN  + P RV+GW+S+  IES+GS+ V+LFWAF N+ ++LE AK++YG+++AGAQIGAI   +   TL    E+  V   Y  G  C  +M  +V  Y   FG   N+       + +        GLKL   H YV  +F ISCL+ V +TILDY MKVL    F E   D+   A    A+ MG FGQ TN+LS   SL GTS  +R +GL  T+  FPT   +AVV+ +  P+L  +F A+ +LK
Sbjct:  133 PIHQLFYIVGCFYACAFTVLALALSHPTLGVANTESSPYRVLGWISYCTIESFGSIGVSLFWAFCNSAMNLEQAKSAYGIIVAGAQIGAICGPTIVTTLA---EDFGVPFCYFCGAGCMMMMVFIVYLYTNKFGIQENSGSNGSANDKKKKKGGVFEGLKLFWDHHYVKGIFAISCLFMVEVTILDYTMKVLAKGEFDELYPDDPAAATRAFATFMGRFGQATNTLSFSFSLLGTSFIIRRIGLNYTVIAFPTCCFIAVVSVYLYPNLYSVFSAMLLLK 408          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: I2CQZ5_NANGC (ADP,ATP carrier protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQZ5_NANGC)

HSP 1 Score: 185 bits (469), Expect = 1.400e-50
Identity = 116/276 (42.03%), Postives = 158/276 (57.25%), Query Frame = 1
Query:    4 PPRQLFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDE---ADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            P  QLFY +G  Y  +F  V+ +L +   GLAN    P+R++GW S+ AIES+GS+ V+LFWAF N+T+DLE AK +YGL+IAGAQ+G+I+      TL I   ++ V  LY  G LC  LM + V  YV  FG  +  E     +G     + G  L ++H YV  +F +SCL+ V +TILDY MKVL    F      +     +  AS MG FGQ TN +S L SL GTS  +R LGL ++L  FP L + A+  +   P L  +F  +  LK
Sbjct:  190 PKHQLFYYVGIFYFCVFAGVAYMLASPTYGLANTKADPSRILGWFSYCAIESFGSIGVSLFWAFVNSTIDLEGAKKAYGLIIAGAQVGSILG----PTLVIRAHSIGVPTLYFCGALCMLLMVVSVFVYVQQFGVEVD-EAPNKKKGKKAGVMEGFHLFMQHAYVRGIFALSCLFMVEVTILDYMMKVLAKRYFTALYPHDPARVTDAFASFMGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLK 460          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A7S2SQY8_9STRA (ADP,ATP carrier protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.640e-50
Identity = 117/277 (42.24%), Postives = 161/277 (58.12%), Query Frame = 1
Query:    7 PRQLFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVDSA--LNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAGDE---ADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            P QLFYI+G  YT LF ++   L    LG+ N    P R++GW+S+ AIES+GS+ VA FWAF N+  DLE+AK SYGL++A AQ+G++    +  TL      L +  LY  G  C ALM  +V  YV  FG +      +   G    A  L GL+L  ++ YV  +  +SC++ V +TILDY MKVL    F     D+   A +  A  MG FGQ TN+LS  +SL GTS  +R LGL+KT+ +FP LL+ A +  +F PSL  +F  + +LK
Sbjct:  130 PHQLFYIIGGFYTGLFAVIGASLMHPTLGIYNTEADPTRILGWISYCAIESFGSIGVANFWAFANSVYDLESAKKSYGLLVACAQLGSV----SGPTLVTQAALLGIPFLYMCGAGCMALMVAMVFFYVRRFGTDSGAGG-SGKGGKKKKADMLEGLRLFWKYPYVQGITAVSCIFMVEVTILDYAMKVLAKAKFEAMHPDDPVAATQAFAQFMGFFGQATNALSFCLSLLGTSFVIRRLGLQKTILLFPVLLLGAGILVYFMPSLGLVFAMMLVLK 401          
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Match: A0A7S4E4K2_9STRA (ADP,ATP carrier protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4K2_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.490e-49
Identity = 116/279 (41.58%), Postives = 162/279 (58.06%), Query Frame = 1
Query:    4 PPRQLFYILGACYTLLFLLVSLVLR---TAPLGLANWGTRPARVVGWVSFVAIESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATLPIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTVDSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMF-RETAGDE--ADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLLVVAVVTSFFAPSLSFLFVAVAILK 822
            P  QLFYI+G  Y  LF L++ +L    TA   + N    P R++GW+S+ +IES+GS+ V+LFWAFTN+T +LE AK +YGL++A AQ+G+I AG T  +  +  E   V  +Y  G LC   M + + GY   F       R +  + +      GL L  ++ YV  +F +SCL+ V +TILDY MKVL    F  E  GD   A    AS MG FGQ  N LS   SL GTS+ +R LGL +TL +FPTL + A+   +  P+L  +F+A+ +LK
Sbjct:  126 PKHQLFYIVGGFYAGLFTLIACLLAAPATAQTSIYNTNASPYRLIGWISYCSIESFGSIGVSLFWAFTNSTYNLEGAKKAYGLMVACAQLGSI-AGPTLVS--VGTEAYGVPTIYFCGALCMVAMVVSIYGYNLRFPQQPDSPRASTKKKSSAGMTEGLVLFWKYHYVKGIFALSCLFMVEVTILDYSMKVLAKAKFDSEHPGDPHAATRAFASFMGVFGQAANGLSFCFSLLGTSMVIRRLGLNRTLLLFPTLCLGAICFVYTTPTLEAVFLAMLLLK 401          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14685.3360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS7_ECTSI5.440e-17297.77ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3JRE1_9STRA3.760e-5944.29ADP,ATP carrier protein n=1 Tax=Aureoumbra lagunen... [more]
A0A8J6CDP2_DIALT1.110e-5745.22ADP,ATP carrier protein n=1 Tax=Diacronema lutheri... [more]
A0A835YYY6_9STRA6.190e-5643.01ADP,ATP carrier protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4ED78_9STRA3.100e-5443.55ADP,ATP carrier protein n=1 Tax=Pelagomonas calceo... [more]
A0A8J2S4J6_9STRA5.600e-5243.55ADP,ATP carrier protein n=1 Tax=Pelagomonas calceo... [more]
A0A7S2B3P9_9STRA6.120e-5141.94ADP,ATP carrier protein n=1 Tax=Dictyocha speculum... [more]
I2CQZ5_NANGC1.400e-5042.03ADP,ATP carrier protein (Fragment) n=2 Tax=Nannoch... [more]
A0A7S2SQY8_9STRA1.640e-5042.24ADP,ATP carrier protein n=1 Tax=Rhizochromulina ma... [more]
A0A7S4E4K2_9STRA1.490e-4941.58ADP,ATP carrier protein n=3 Tax=Pelagomonas calceo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14685contigE-fasciculatus_F_contig14685:581..2965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.4
Seed ortholog evalue2.1e-138
Seed eggNOG ortholog2880.D8LFS7
EggNOG free text desc.TLC ATP/ADP transporter
EggNOG OGs2R2N3@2759,COG3202@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionADP/ATP carrier protein
Ec32 orthologEc-01_001090.1
Exons4
Model size822
Cds size822
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14685.3360.1prot_E-fasciculatus_F_contig14685.3360.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14685 581..2965 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927952.5371258-CDS-E-fasciculatus_F_contig14685:580..8381622927952.5371258-CDS-E-fasciculatus_F_contig14685:580..838Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 581..838 -
1695995764.4334466-CDS-E-fasciculatus_F_contig14685:580..8381695995764.4334466-CDS-E-fasciculatus_F_contig14685:580..838Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 581..838 -
1622927952.6193492-CDS-E-fasciculatus_F_contig14685:1543..16641622927952.6193492-CDS-E-fasciculatus_F_contig14685:1543..1664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 1544..1664 -
1695995764.4517546-CDS-E-fasciculatus_F_contig14685:1543..16641695995764.4517546-CDS-E-fasciculatus_F_contig14685:1543..1664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 1544..1664 -
1622927952.6303027-CDS-E-fasciculatus_F_contig14685:1918..20841622927952.6303027-CDS-E-fasciculatus_F_contig14685:1918..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 1919..2084 -
1695995764.4618402-CDS-E-fasciculatus_F_contig14685:1918..20841695995764.4618402-CDS-E-fasciculatus_F_contig14685:1918..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 1919..2084 -
1622927952.6450558-CDS-E-fasciculatus_F_contig14685:2688..29651622927952.6450558-CDS-E-fasciculatus_F_contig14685:2688..2965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 2689..2965 -
1695995764.4751716-CDS-E-fasciculatus_F_contig14685:2688..29651695995764.4751716-CDS-E-fasciculatus_F_contig14685:2688..2965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14685 2689..2965 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14685.3360.1

>prot_E-fasciculatus_F_contig14685.3360.1 ID=prot_E-fasciculatus_F_contig14685.3360.1|Name=mRNA_E-fasciculatus_F_contig14685.3360.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=274bp
LPPRQLFYILGACYTLLFLLVSLVLRTAPLGLANWGTRPARVVGWVSFVA
IESYGSLAVALFWAFTNATVDLEAAKASYGLVIAGAQIGAIIAGSTAATL
PIHNENLHVWHLYAVGGLCPALMALLVRGYVFFFGNNLPRERLTNVQGTV
DSALNGLKLVLRHQYVALLFGISCLYEVVLTILDYQMKVLGVEMFRETAG
DEADEHMASLMGHFGQTTNSLSLLMSLFGTSLCVRLLGLRKTLRIFPTLL
VVAVVTSFFAPSLSFLFVAVAILK
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mRNA from alignment at E-fasciculatus_F_contig14685:581..2965-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14685.3360.1 ID=mRNA_E-fasciculatus_F_contig14685.3360.1|Name=mRNA_E-fasciculatus_F_contig14685.3360.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2385bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14685:581..2965- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCCACCGAGGCAGTTGTTCTACATCCTAGGAGCCTGCTACACGCTGCT CTTCTTGCTGGTGAGCCTGGTGCTACGGACCGCCCCGCTCGGCCTGGCCA ACTGGGGCACGAGACCCGCCCGTGTGGTGGGCTGGGTATCGTTCGTGGCG ATCGAGTCGTACGGGTCTCTGGCCGTGGCGCTGTTCTGGGCCTTCACCAA CGCCACCGTCGACCTCGAGGCGGCGAAGGCTTCCTACGGGCTGGTGATCG CCGGGGCTCAGATCGGAGCCATTATAGGTGGGTCGAGATGGACAACAGGC ACGGAAGCTATGGAAATGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGTTGTGTGTTCACATTGAAAACCGATGTGTCCCCTGCA TCCAACACCTCCTCGGAGGTTCGACTTGACACAATGCAGAAGTCATCCCC CGGAGCCATAACTTGGCCGATCCAGAACATATGGTTTTGAACTTACCGCG GAGGGGACGGGGGCGTCGTGGTGTGGACACACACGGGCGGGGGGGTTCTA GGAGGTTGTTCTGGAGAACCTCGTAGCATGGCGGTTGATCATGTTGCGAC AGGCGATAACGACGGCTCCTAACCATCCAGGATACAGCTAACGTCCGAAG GGGGTGTTGTGCGTGTTGATATGGCTTGACCTCGACAACGAGGGCGATGC AGTTAACTCCCCAAATGTGCCTCTACCAACACATTCTTTTGACCGAGAAA CATGGCAAAAGGGCAAACACGTTACTCTCCCAGAACAACAGCAGTACCCT ATGTTGACAGTGGTGGAGGCAAACGTCCCGTTACCGCTCACAACCACGAT TACGTGTGCTCTGTCCTGCTCGCCCTCTGAGCAGGGTCGACGGCCGCGAC GCTGCCCATACACAACGAGAACCTCCACGTGTGGCATCTCTACGCAGTCG GGGGGCTCTGCCCCGCACTAATGGCGTTGCTCGTTCGCGGCTACGTGTTC TTTTTCGGCAACAACCTGCCGCGGGAGCGCTTGACCAACGTCCAGGGGTG AGGCGAACACACGCGGGGGGTAGTCGTGTTTTGCATGCCTTAGTTGTTAG AACCACGCGTCCTCCGGACGGGTAGGGTGCGAAATATTGCACTGGTGAAG TCAATATGCCTGGATGAAGAAGGCTGCCGCTCCACTGTTGGCAATCGTCA ATTTTCTACACACATGCCGCCGACCCACCTTACAAAATTTCGTCGGAAAA CAAGCGCAACCGCCCCCCTTTTATTCGCCGTCGCTTTTTGTGGGTGCTCA GGACCGTTGACAGCGCCCTCAACGGGCTTAAGCTTGTGCTTCGGCACCAG TACGTCGCGCTTCTCTTCGGAATAAGCTGTCTGTACGAGGTGGTGCTGAC CATCCTAGACTACCAGATGAAGGTACAACTTCTTGTAAAGTATGTTGTTC TCTCGATGTTGCTTTGTTTTTTGTGAAGATGTCTGGCCAAGGAGTGGCTC GACCCCGTTATGCAGTCAGCGTGGAAATGGATGTGTATCGTAACGGTCAG CAGCAACGGACGAGCTATGTCAACTCCTAAGTGTCGACTTGTAGAATTTT CCCTGCCGCGGTACCTCGTCCAGTGTATAGGTGCGCATTGCTACGTCGTT TGGGCCTAGGATAGTGTCTATTGGCACGGAAAATTTTTCACTACCATGGA CTGGTCCGGCTTACGCTCATGGAGTGCACTGGAAAGGGGAGCGAGTACGC GTAGGTTTAGCGCAGCGCTTGGGTGTTCCCATCGCTGTTTCTTGTTACGT ATTTCCGGGCTCTGGCTGTCCTTCACGAAGATCTCTTTGCCGCATCATTT TCCAAGCCCCGGCCTCGGCGACAGCTCTCTCTCGAGCTCACCGCCTAGCC TAATCACCCACCCATGTCAATCGCGTGATCTTCAGCCGATCAGGCACGTT CTGCATGATCAGTGAACGAATGGGTACTCTATATACTCGATTCGAAAATT CGGGACACATTCGAGATTTTCATTTTCAAACCTCCCGACAAAACAAACCA GCGAACAAAGTCTTTGAGTGTCGCCATCTCTCCATCTTTTCATCCATCAA TACCGTGGAACCGGACCGCGAATCCAGGTTCTGGGCGTGGAAATGTTCCG CGAAACAGCGGGCGACGAGGCGGACGAGCACATGGCGAGCCTCATGGGAC ACTTCGGCCAGACGACCAACTCGCTGTCGCTACTCATGTCGCTCTTCGGC ACGAGCCTCTGCGTGCGCCTGCTCGGGTTGCGGAAAACTCTGAGAATTTT CCCGACCCTCCTGGTGGTGGCCGTGGTGACGTCGTTCTTCGCGCCGTCGT TGAGCTTCCTCTTCGTGGCCGTCGCCATTCTGAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14685:581..2965-

>mRNA_E-fasciculatus_F_contig14685.3360.1 ID=mRNA_E-fasciculatus_F_contig14685.3360.1|Name=mRNA_E-fasciculatus_F_contig14685.3360.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1644bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14685:581..2965- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCCACCGAGGCAGTTGTTCTACATCCTAGGAGCCTGCTACACGCTGCT
CTTCTTGCTGGTGAGCCTGGTGCTACGGACCGCCCCGCTCGGCCTGGCCA
ACTGGGGCACGAGACCCGCCCGTGTGGTGGGCTGGGTATCGTTCGTGGCG
ATCGAGTCGTACGGGTCTCTGGCCGTGGCGCTGTTCTGGGCCTTCACCAA
CGCCACCGTCGACCTCGAGGCGGCGAAGGCTTCCTACGGGCTGGTGATCG
CCGGGGCTCAGATCGGAGCCATTATAGCTCCCACCGAGGCAGTTGTTCTA
CATCCTAGGAGCCTGCTACACGCTGCTCTTCTTGCTGGTGAGCCTGGTGC
TACGGACCGCCCCGCTCGGCCTGGCCAACTGGGGCACGAGACCCGCCCGT
GTGGTGGGCTGGGTATCGTTCGTGGCGATCGAGTCGTACGGGTCTCTGGC
CGTGGCGCTGTTCTGGGCCTTCACCAACGCCACCGTCGACCTCGAGGCGG
CGAAGGCTTCCTACGGGCTGGTGATCGCCGGGGCTCAGATCGGAGCCATT
ATAGCAGGGTCGACGGCCGCGACGCTGCCCATACACAACGAGAACCTCCA
CGTGTGGCATCTCTACGCAGTCGGGGGGCTCTGCCCCGCACTAATGGCGT
TGCTCGTTCGCGGCTACGTGTTCTTTTTCGGCAACAACCTGCCGCGGGAG
CGCTTGACCAACGTCCAGGGCAGGGTCGACGGCCGCGACGCTGCCCATAC
ACAACGAGAACCTCCACGTGTGGCATCTCTACGCAGTCGGGGGGCTCTGC
CCCGCACTAATGGCGTTGCTCGTTCGCGGCTACGTGTTCTTTTTCGGCAA
CAACCTGCCGCGGGAGCGCTTGACCAACGTCCAGGGGACCGTTGACAGCG
CCCTCAACGGGCTTAAGCTTGTGCTTCGGCACCAGTACGTCGCGCTTCTC
TTCGGAATAAGCTGTCTGTACGAGGTGGTGCTGACCATCCTAGACTACCA
GATGAAGGACCGTTGACAGCGCCCTCAACGGGCTTAAGCTTGTGCTTCGG
CACCAGTACGTCGCGCTTCTCTTCGGAATAAGCTGTCTGTACGAGGTGGT
GCTGACCATCCTAGACTACCAGATGAAGGTTCTGGGCGTGGAAATGTTCC
GCGAAACAGCGGGCGACGAGGCGGACGAGCACATGGCGAGCCTCATGGGA
CACTTCGGCCAGACGACCAACTCGCTGTCGCTACTCATGTCGCTCTTCGG
CACGAGCCTCTGCGTGCGCCTGCTCGGGTTGCGGAAAACTCTGAGAATTT
TCCCGACCCTCCTGGTGGTGGCCGTGGTGACGTCGTTCTTCGCGCCGTCG
TTGAGCTTCCTCTTCGTGGCCGTCGCCATTCTGAAGGTTCTGGGCGTGGA
AATGTTCCGCGAAACAGCGGGCGACGAGGCGGACGAGCACATGGCGAGCC
TCATGGGACACTTCGGCCAGACGACCAACTCGCTGTCGCTACTCATGTCG
CTCTTCGGCACGAGCCTCTGCGTGCGCCTGCTCGGGTTGCGGAAAACTCT
GAGAATTTTCCCGACCCTCCTGGTGGTGGCCGTGGTGACGTCGTTCTTCG
CGCCGTCGTTGAGCTTCCTCTTCGTGGCCGTCGCCATTCTGAAG
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