mRNA_E-fasciculatus_F_contig1468.3357.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1468.3357.1
Unique NamemRNA_E-fasciculatus_F_contig1468.3357.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 1.400e-177
Identity = 233/297 (78.45%), Postives = 268/297 (90.24%), Query Frame = 1 
Query:   16 KMLLDIARLACIFSLLVVGSDTLYARSEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRDSLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            KMLLD  RLAC+FSLLVVGSDTLYARSEPG+PPEYCTVFHHMVKSAGSTVKS+L  AT+ +G+ +PAVCING+ R  ACLEAINSSAIITGYAEL+R  LEV R EC+YFT+LRHPIDRLVSAFFYCP+DHD+Q+RPRKWCG+ +HP+PATERLL+FA+E WQN AFKQM++G+YCPP+  C E ++++PQMLDEPG LD+L QV++ LAGYTAVGIMEHW+LSM+LFNARVRSPVREWN FKQ NPG MSGLRDEVLQWAHE+P IHRV+ TDMLLY FALSIFKQQTTA+LGTNW
Sbjct:  112 KMLLDTVRLACVFSLLVVGSDTLYARSEPGEPPEYCTVFHHMVKSAGSTVKSLLHRATRNEGLPRPAVCINGHARTDACLEAINSSAIITGYAELIRYPLEVNRRECDYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFCDEAEVESPQMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNW 408
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 8.290e-151
Identity = 203/305 (66.56%), Postives = 249/305 (81.64%), Query Frame = 1 
Query:    1 MPPFMKMLLDIARLACIFSLLVVGSDTLYARSEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCINGNDRK-SACLEAINSSAIITGYAELMRDS--LEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            MPP+MK +  I RLA + SLLVVGSDT YARSEPGQPPEYCTVFHHMVKS GST+K  L ++++  G  +P  C+ G  ++ ++C EA NSSA+I GYAELMR    LE VR +CEYFT+LRHP+DRLVSAFFYCP+DHD+Q+RP KWCG  D PLPAT+RLLEFA++ W+N+A+KQM++GMYCP   IC   +++    LDEP GLD+L +VEDIL+GYTAVGIMEHW+LSM+LFNARVRSPVR+WN   +SN G  S LRDEVLQWAH++P IHR++ATD+LLYSFALSIFK+QTT +LGTNW
Sbjct:    1 MPPYMKTIWLIVRLASVLSLLVVGSDTFYARSEPGQPPEYCTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICEATEVETAPGLDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNW 305
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 3.340e-143
Identity = 195/305 (63.93%), Postives = 236/305 (77.38%), Query Frame = 1 
Query:    1 MPPFMKMLLDIARLACIFSLLVVGSDTLYARSEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCI-NGNDRKSACLEAINSSAIITGYAELMRDS--LEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            MPP M+ +L I     + SLLVVGSD  YARSEPGQPPEYCTVFHHMVKS GST+           G  +P +C+  G ++ ++C EA NSSA+I GYAE MR    LE VR +CEYFT+LRHP+DRLVSAFFYCP +HD+Q RP KWCG  DHPLPAT+RLL++A++ W+N+A+KQM++GMYCP   IC   ++     LDEP GLD+L +VEDIL+ YTAVGIMEHW+LSM+LFNARVRSPVREWN  + SN G  S LRDEVLQWAH++P +HR++ATDMLLYSFALSIFK+QTT ALGTNW
Sbjct:    1 MPPHMRTILHIVWSVSVLSLLVVGSDAFYARSEPGQPPEYCTVFHHMVKSGGSTIXXXXXXXXXSAGDPRPGLCVAGGGEKTNSCKEAFNSSAVIMGYAEAMRQDVPLEAVRKDCEYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATEVRTAPGLDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNW 305
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 8.310e-133
Identity = 179/246 (72.76%), Postives = 210/246 (85.37%), Query Frame = 1 
Query:  175 LAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRD--SLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            L   T    V+   VCIN  DR +ACLEAINSSAIITGYAEL+R    LEV R EC+YFT+LRHPIDRLVSAFFYCP+DHD+Q+RPRKWCG+ +HP+PATERLL+FA+E W+N AFKQM++G+YCPP+  C E ++D+PQMLDEPG LD+L QV+DILAGYTAVGIMEHW+LS++LFNARVRSPVREWN  KQ NPG M+ LRDEVLQWAH++P IHRV+ TDMLLYSF LSIFKQQTTA+LGTNW
Sbjct:    8 LTPGTDVGNVKADTVCINEQDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 253
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 1.090e-129
Identity = 174/290 (60.00%), Postives = 226/290 (77.93%), Query Frame = 1 
Query:   37 RLACIFSLLVVGSDTLYARSEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRDSLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            R+AC+ SL  +G D LYA S PG+PPEYCT+F+HMVKS GST+K  L +A + DGV+ PA+C+NG   + +CL+A++S+ +I GYAEL+R  LEV+  ECEYFTV+RHPIDRL+SAFFYCP+  D+Q RP KWCG  + P P T+RL+EFAK  W+N AF+QM++G+YCPP A C + +  A Q + EPGG  LL Q+E ILA YTAVGI+E+W+LSM+LFNARV SPV +W   + SN G  SGLRDEV +WAH +PEIHRV+ATDMLLY +++S+FK QT+A+LGT W
Sbjct:  100 RVACLLSLRAIGCDALYAWSNPGEPPEYCTLFNHMVKSGGSTIKDKLDIAAKADGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIW 389
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 2.180e-112
Identity = 153/220 (69.55%), Postives = 179/220 (81.36%), Query Frame = 1 
Query:  313 LEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAIC----------------------GEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNW 906
            LEV R EC+YFT+LRHPIDRLVSAFFYCP+DHD+Q+RPRKWCG+ +HP+PATERLL+FA+E W+N AFKQM++G+YCPP+  C                      G  ++  PQMLDEPG LD+L QV+DILAGYTAVGIMEHW+LSM+LFNARVRSPVREWN FKQ NPG M+GLRDEVLQWAH++P IHRV+ TDMLLYSF LSIFKQQTTA+LGTNW
Sbjct:    7 LEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 226
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.460e-97
Identity = 140/282 (49.65%), Postives = 187/282 (66.31%), Query Frame = 1 
Query:   70 GSDTLYAR-SEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRDSLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICG-EMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNWR 909
            G   +Y R S    PP YCT+FHHMVK+ G+ V+  L +A++  G + P +C+ G     ACL+A++ S++I GY EL+RD +E +   C+YFT++RHPIDRLVSAF+YCP+ HD Q+RP KWCG   HP P T RLL+FA+E W   A  Q+S+  YCPP A C  +M  + P  L+      LL   ED+L  YTAVGI E WELSMELF+A + SPV++W   +  NPG  S  R+ +L+WAH +PEI + +  D+LLY  ALSIFK+QT  ALGT W+
Sbjct:   11 GCQAIYTRASMDTDPPTYCTMFHHMVKNGGTAVRDQLILASEIQGRDVPGLCVIGPSSAEACLDALHHSSVIMGYVELLRDPMEELGRRCDYFTMMRHPIDRLVSAFYYCPTFHDKQVRPNKWCGGHSHPDPLTSRLLDFAREDWMCKAMFQLSFASYCPPGAFCEHDMVEEPPTHLNGVEDWSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVWK 292
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: D7FUF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF7_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.900e-85
Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 1 
Query:  499 WQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDEPGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQSNPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGTNWR 909
            WQNLAFKQM+YG+YCPPEAICGEM+LDAPQM+DEPGGLDLL QVEDILAGY AVGIMEHW LSMELFNARVRSPVREWN+FKQ NPG  SGLRD+VLQWAHENP IHRVL  DMLLYSFALSIFKQQT  ALGTNWR
Sbjct:    2 WQNLAFKQMTYGLYCPPEAICGEMQLDAPQMVDEPGGLDLLQQVEDILAGYAAVGIMEHWGLSMELFNARVRSPVREWNRFKQKNPGVTSGLRDQVLQWAHENPAIHRVLGADMLLYSFALSIFKQQTAEALGTNWR 138
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BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5JQY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY1_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.220e-63
Identity = 93/136 (68.38%), Postives = 113/136 (83.09%), Query Frame = 1 
Query:  175 LAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRD--SLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKL 576
            L   T    V+   VCING+DR +ACLEAINSSAIITGYAEL+R    LEV R ECEYFT+LRHPIDRLVSAFFYCP+DHD+Q+RPRKWCG+ +HP+PATERLL+FA+E WQN+AFKQM++G+YCPP+  C E ++
Sbjct:    8 LTPGTDVGNVKADTVCINGHDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECEYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWQNMAFKQMTFGLYCPPDTFCEEAEV 143
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Match: A0A6H5J534_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J534_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.310e-56
Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 1 
Query:   85 YARSEPGQPPEYCTVFHHMVKSAGSTVKSMLAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAELMRDSLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVDHPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAIC 561
            YARS+P QPPEYCTVFHHMVKSAGST+K  L  +++  GV +P     G  R   C  A +S     G A   R  LE VR  CEYFT++RHPIDRLVSAFFYCP DHD+Q+RPRKWCG  DH +P T+RLL+F +  WQN+A+KQM+YGMYCPP+ IC
Sbjct:  577 YARSDPDQPPEYCTVFHHMVKSAGSTIKDNLYKSSRIAGVPRP----GGTTR---CATACHSIPFPLGRA---RVPLEAVRKGCEYFTLMRHPIDRLVSAFFYCPKDHDLQLRPRKWCGYADHQVPVTDRLLDFTEHYWQNMAYKQMAYGMYCPPDLIC 725
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1468.3357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5K0_ECTSI1.400e-17778.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT23_9PHAE8.290e-15166.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5I1_9PHAE3.340e-14363.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0M4_9PHAE8.310e-13372.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT32_9PHAE1.090e-12960.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUF0_9PHAE2.180e-11269.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT4_ECTSI1.460e-9749.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FUF7_ECTSI6.900e-8587.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQY1_9PHAE1.220e-6368.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J534_9PHAE3.310e-5660.38Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1468contigE-fasciculatus_F_contig1468:5491..9964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.9
Seed ortholog evalue1.1e-18
Seed eggNOG ortholog2880.D7G716
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size912
Cds size912
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927952.1883545-CDS-E-fasciculatus_F_contig1468:5490..55711622927952.1883545-CDS-E-fasciculatus_F_contig1468:5490..5571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 5491..5571 +
1695995764.2362764-CDS-E-fasciculatus_F_contig1468:5490..55711695995764.2362764-CDS-E-fasciculatus_F_contig1468:5490..5571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 5491..5571 +
1622927952.2245903-CDS-E-fasciculatus_F_contig1468:5968..61011622927952.2245903-CDS-E-fasciculatus_F_contig1468:5968..6101Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 5969..6101 +
1695995764.246406-CDS-E-fasciculatus_F_contig1468:5968..61011695995764.246406-CDS-E-fasciculatus_F_contig1468:5968..6101Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 5969..6101 +
1622927952.2365022-CDS-E-fasciculatus_F_contig1468:6553..66441622927952.2365022-CDS-E-fasciculatus_F_contig1468:6553..6644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 6554..6644 +
1695995764.2551823-CDS-E-fasciculatus_F_contig1468:6553..66441695995764.2551823-CDS-E-fasciculatus_F_contig1468:6553..6644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 6554..6644 +
1622927952.2480438-CDS-E-fasciculatus_F_contig1468:7976..81031622927952.2480438-CDS-E-fasciculatus_F_contig1468:7976..8103Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 7977..8103 +
1695995764.2652397-CDS-E-fasciculatus_F_contig1468:7976..81031695995764.2652397-CDS-E-fasciculatus_F_contig1468:7976..8103Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 7977..8103 +
1622927952.2642946-CDS-E-fasciculatus_F_contig1468:8322..84631622927952.2642946-CDS-E-fasciculatus_F_contig1468:8322..8463Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 8323..8463 +
1695995764.2747679-CDS-E-fasciculatus_F_contig1468:8322..84631695995764.2747679-CDS-E-fasciculatus_F_contig1468:8322..8463Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 8323..8463 +
1622927952.2768579-CDS-E-fasciculatus_F_contig1468:8975..90351622927952.2768579-CDS-E-fasciculatus_F_contig1468:8975..9035Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 8976..9035 +
1695995764.2870631-CDS-E-fasciculatus_F_contig1468:8975..90351695995764.2870631-CDS-E-fasciculatus_F_contig1468:8975..9035Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 8976..9035 +
1622927952.2907236-CDS-E-fasciculatus_F_contig1468:9685..99641622927952.2907236-CDS-E-fasciculatus_F_contig1468:9685..9964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 9686..9964 +
1695995764.2968123-CDS-E-fasciculatus_F_contig1468:9685..99641695995764.2968123-CDS-E-fasciculatus_F_contig1468:9685..9964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1468 9686..9964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1468.3357.1prot_E-fasciculatus_F_contig1468.3357.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1468 5491..9964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1468.3357.1

>prot_E-fasciculatus_F_contig1468.3357.1 ID=prot_E-fasciculatus_F_contig1468.3357.1|Name=mRNA_E-fasciculatus_F_contig1468.3357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=304bp
MPPFMKMLLDIARLACIFSLLVVGSDTLYARSEPGQPPEYCTVFHHMVKS
AGSTVKSMLAVATQEDGVEKPAVCINGNDRKSACLEAINSSAIITGYAEL
MRDSLEVVRGECEYFTVLRHPIDRLVSAFFYCPSDHDIQIRPRKWCGNVD
HPLPATERLLEFAKERWQNLAFKQMSYGMYCPPEAICGEMKLDAPQMLDE
PGGLDLLMQVEDILAGYTAVGIMEHWELSMELFNARVRSPVREWNKFKQS
NPGSMSGLRDEVLQWAHENPEIHRVLATDMLLYSFALSIFKQQTTAALGT
NWR*
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mRNA from alignment at E-fasciculatus_F_contig1468:5491..9964+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1468.3357.1 ID=mRNA_E-fasciculatus_F_contig1468.3357.1|Name=mRNA_E-fasciculatus_F_contig1468.3357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4474bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1468:5491..9964+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCCGTTCATGAAGATGCTCTTGGACATCGCCAGGCTGGCCTGCAT
ATTCTCCTTGCTCGTAGTTGGGAGTGATACGGTGAGGTTCTGGGCTGCTA
CTGTGCATGCCTTCCTACAAAAGCCAGTTTTGAGTGTTGTGGAAGGCTAG
CTGCTACGGAGGTGTGATGTTCCGAAATCAACGGCGGCATTCGCGCGTGG
ATCCTAGGAGGGTTTCTTGAAGGCACTGGCGGTTTTGGAATCACATGGGA
GACGAGGTCGTCGCAAGCTGTGCCAAGTCTTTGGCTTTTGTCGACGAATA
TTAGTAGAGTGAACGTGAGGACACGGGGAACGGGTTCTATGAGGAACGCA
ATACCTTATGTGAATTTCTCGTGGTCTTGTAACCTCAGCTGCATGGTGGC
TAACACGGACCCAATCCACCCTCGCATCCTTGCTGTGATGCTGTTGTTGT
CGATTTGTGCGCTGCTTCATGTGTAAAGCTGTACGCGAGGAGTGAACCCG
GGCAGCCTCCTGAATACTGCACCGTCTTCCATCATATGGTCAAAAGCGCG
GGCTCGACGGTCAAGAGCATGCTTGCCGTTGCGACACAGGAGGACGGCGT
CGAGAAACCAGGTGCAACCTTGGTCTAGAAAAGTTTGAAGTATCACTCGG
AAGATCGAACCCGCTCCATATGCATCAAACAAGGTCTACATCCTGGTGTT
GTTCTGTCAATCTCCAAGGTACCAAGGAACACATACCACATCTTTTGAAT
GATCCTCACACGCTTGCGATCTATGCATGCATGCAACGAGTATATCAACC
TTATGATGGACCGAGATTCTGGCCCTCCAACAAAGTAGGAAATGACGCCA
TTTATGTACGGCAGTGCACAAAGTGTACTTGGGTGTTGTCACCGACAGGA
TGATGAGGAGACATTCGTGTAAATCAAAGCTGACGATACGAAATGTTGCC
ATCGACCGACTCCGACTCCAGGCGTTGTCTGTATCTCGTTTCGCCGGTGT
GTGAGAAACAACGAAACCACGTGAAGTTTAACTCTCTTCCTGCTGTTTCG
CATGCCGGCGCAGCTGTGTGCATAAACGGGAACGACAGAAAGTCCGCTTG
CCTGGAAGCCATCAACTCTTCTGCGATCATCACGGGGTACGCGGAACTGA
TGAGGTGATTGCCACTGCCACTGCACGATGCTTTCCATTCAGAGCTACAG
CAATGCAGACGATTCCTGTATCATATTCTCTGTTGTTGTTTAAAAATAAT
ATTGGACAAACAACGAACACTGAGGAATGGTGTAAAGTCCAGGCGAGGTG
TCTCTCTCATCACCTTTGCAAAAGAAAGGGGGTTCCAGTTCGTCAAGGTT
CGAGGATAGCCACGTGAGGGTTCTTGTTTGCCGGTTCTCGTGGCCTTGGT
TGACATGAACGAACACTCCGGGAATATGTGTTGCCAGACCCTGATCGATC
CGCCGAGAAATTGCTATATAACACTTTCGGTGGTTTCCAGACACAAAAAG
TACCGTCGCGTCTGTCTCAACCCGAACACACGCGTCCGGAATAGACAGAA
GGATCCAAAGAAGGTTGAAAATGTTCATGGTTGGTTCGTTATAAAGAAAA
TGTTCATGGTTGGTTCGTTATAATTGGTCTCTGAGGGGGGGCTCGGGCAG
GTTGGTTTCCCGGCAAAAAACAAATCTCTCAACATAGTGAACGCAACGTC
AGCTGAAACGAGGAGAAAACTTGCGGCAGCCTGTACTGGACTTCCATAGC
AGGTCAATGTCCGACAGGGATCTGTAGTTCATCACCCAGCGTCGGTAACG
GCGTCTGTAAACATCCACGAGAATAGCATGGGCACGGCGTAGGGGTCGGA
CTACGTCATGCAATGGAGGGGTTGCGACTGTGGATTCAGTTAACGTTGTT
TGGAACCCGTTTCATCCGGATATGGCATGATCGTGAGAAGCCGACTTTGC
TCGGACCCTATGAGTGGTGGCAATGCTTGGAGGAAAATCAATCGATTGAC
AAACTTGTGGCGAAATCGAGCGGCTGTGTGTGGGATCGCCCGCCTTCGCT
GTTATTAAACCCACCCGGCAACTCGTGGGAAAGGTTGAGAGTTCGTCACA
CTGCATGTTGCGCCACCGACGGAGAGAGAAGATACGATGGGCGTAACGAT
AGTTAATTTGGCACAGTACGCGTTACCACAGTCGCCATTGATTGACTTCG
ATTGACTCGGTGTGAAAGTCGCCCCCCCCTTCCGACCACACAACTTGACT
TGCGTCATTTATTCGTCGAGAAACTTGCAAGGGTTGCCCGGTAACCTCCC
GATTGTGAGGACGGTTTAGTGCGTCGATTTTACCTGTTCTTCTTTCCCCA
AGAAAACTCAATGAACGCCCGGCTCAAGAGGATCACGGCGTTTCCACGGT
CTATTTCCCCCGAACGCCCCGAACGTTGGCGCGCATGTTTAACAACCGGA
AATATGTTTTTTTGTTCTTCTCCTCCGTCTTACCAGAGATTCTTTGGAGG
TTGTCAGGGGGGAATGCGAGTACTTCACGGTTTTGAGGCACCCGATCGAC
CGCTTGGTCTCGGCGTTTTTCTACTGCCCGTCGGACCACGACATTCAAAT
CAGGCCCCGGAAGGTGTGTGTGTGTGTTCAACGTCCCCGCCGCAGATCGT
GGCGACTTCGCTTAACTTGAGAGCCGAAAAAATCGCAACTACTTGTGTGA
TGACGTAGGGCCGCCGTTTACCGTGTCATCTGGAGCAGAATGTCATGTCT
ACACAGATGTTGCTCTTGTTCCATGTTAGCTCTACCAACTAGATGTGTGA
CTCCTTGCTGCACGTCCCCGAAAATTTTGCAGTGGTGTGGGAATGTCGAC
CACCCGTTGCCCGCGACCGAGCGCCTGTTGGAGTTTGCAAAGGAGAGGTG
GCAGAATCTGGCATTCAAGCAGATGTCGTACGGCATGTACTGTCCCCCTG
AAGCCATCTGCGGAGAAATGAAGGTGAGAGTGGGAATGATCTCGTCTCGT
AAGCGTGTTGCGATTGGCTCTCTTCCCAAATAGGTAGAATTCTGTCTAAG
TGTCAAACTTCGCAGTGGGTGTTGATTTGTTGCACGGGCTACACGGGGGT
ATCACTAGAAAAATGAACACACTATTTCACAAGTTCGGGTCAGTTGTTTC
TTCCAATCACAAAGCGTTTCGGCTCCCGTACCAGTTTCAGTTGGGGCAAT
CAGTTTGTTCTGCCCGAGGCCGGGTATGTATGTGCAGGGAGCTCGGGGCG
AGTCACGAACCCATTTTGCTTTCACGGAAAAATTATTACTCAGTGCGCTG
GTTGCTTTTGTGACGTGGCGCTCTGGGAACCGTTGGCGTAACTACAGTGC
TACATGACGTCAAAGAAGAATTCAGCCGCTTGGCAAGTTGTGCCAAGACC
ACCACTCACCGGTGGTAAGTCTCGCGTGGCAGTATCTGACATTGCTTTGT
GTGTGTGTATCTGGCTCGTGTGGGGTTGCCCGCAGCTTGACGCACCGCAG
ATGCTGGATGAACCCGGTGGCCTAGATCTTCTCATGCAGGTTGAGGTGAG
GAATGCAGATCCGCTATTGCTGTTGTGTTGCTCGTCACAGGCATATGTAG
GGCGAATTTAACGTACTGGTGCCATGGGGAAACCAGTCGATAAATCACCT
GGGCCGGAGACGCTCAGGGGCCCTAGGCCAGGCGTTCTCCCGGCGAAGAG
GGGACACGTATTACCGTAGACATATCTCACTCAACTTCTAGTGGTACATA
TATGCCGTGTTCAAGCGGAGCTAACCACGCTAAAATCGGGACATTTCTTC
GATCTTCTCCCTTTTCCTTAGTCGATAGGCAACGTTGGAGGACATTCAAC
GTTGGGCAGCAGTCAGTTTCGTGCGTAAGGCAGGTTTAGCGTGATGTCGA
CCATTTTCGCACATGGTTGCGAGTTTTGGCGTTTCGTCCAAGGTTCTCCC
GGACACCTGCGTGCCCTTTTTCGGGTGCTATCATAGACAGCACAATCTCG
CGACGATTCTGATTCTGAATCCTAAGTGGCACTGTGGGTTGTTTAGTGCG
TGTCATGGTGTTCGACCGATTCATGATAGGCACCTGGAGTTACACCTAGG
CCGGTCTGTCATCTCTTACCACCACCGACGACGCCTGTCTGACGAAAACT
GTGCTGCTTGTGCCTGATCTGGTTATCGTTGATGTTCGTTCGCAGGACAT
TTTGGCTGGATATACGGCAGTGGGTATCATGGAACACTGGGAGCTGTCGA
TGGAGCTCTTCAACGCCCGCGTGCGGTCTCCCGTGCGTGAGTGGAACAAG
TTCAAACAGAGCAACCCGGGGTCAATGTCCGGACTTCGCGATGAGGTTCT
TCAATGGGCTCACGAAAACCCGGAAATTCACCGGGTGTTAGCAACAGATA
TGTTGTTGTACTCCTTTGCGCTCTCCATTTTCAAGCAACAGACGACGGCA
GCCCTCGGTACGAACTGGCGTTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1468:5491..9964+

>mRNA_E-fasciculatus_F_contig1468.3357.1 ID=mRNA_E-fasciculatus_F_contig1468.3357.1|Name=mRNA_E-fasciculatus_F_contig1468.3357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1824bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1468:5491..9964+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCCGTTCATGAAGATGCTCTTGGACATCGCCAGGCTGGCCTGCAT
ATTCTCCTTGCTCGTAGTTGGGAGTGATACGATGCCGCCGTTCATGAAGA
TGCTCTTGGACATCGCCAGGCTGGCCTGCATATTCTCCTTGCTCGTAGTT
GGGAGTGATACGCTGTACGCGAGGAGTGAACCCGGGCAGCCTCCTGAATA
CTGCACCGTCTTCCATCATATGGTCAAAAGCGCGGGCTCGACGGTCAAGA
GCATGCTTGCCGTTGCGACACAGGAGGACGGCGTCGAGAAACCAGCTGTA
CGCGAGGAGTGAACCCGGGCAGCCTCCTGAATACTGCACCGTCTTCCATC
ATATGGTCAAAAGCGCGGGCTCGACGGTCAAGAGCATGCTTGCCGTTGCG
ACACAGGAGGACGGCGTCGAGAAACCAGCTGTGTGCATAAACGGGAACGA
CAGAAAGTCCGCTTGCCTGGAAGCCATCAACTCTTCTGCGATCATCACGG
GGTACGCGGAACTGATGAGCTGTGTGCATAAACGGGAACGACAGAAAGTC
CGCTTGCCTGGAAGCCATCAACTCTTCTGCGATCATCACGGGGTACGCGG
AACTGATGAGAGATTCTTTGGAGGTTGTCAGGGGGGAATGCGAGTACTTC
ACGGTTTTGAGGCACCCGATCGACCGCTTGGTCTCGGCGTTTTTCTACTG
CCCGTCGGACCACGACATTCAAATCAGGCCCCGGAAGAGATTCTTTGGAG
GTTGTCAGGGGGGAATGCGAGTACTTCACGGTTTTGAGGCACCCGATCGA
CCGCTTGGTCTCGGCGTTTTTCTACTGCCCGTCGGACCACGACATTCAAA
TCAGGCCCCGGAAGTGGTGTGGGAATGTCGACCACCCGTTGCCCGCGACC
GAGCGCCTGTTGGAGTTTGCAAAGGAGAGGTGGCAGAATCTGGCATTCAA
GCAGATGTCGTACGGCATGTACTGTCCCCCTGAAGCCATCTGCGGAGAAA
TGAAGTGGTGTGGGAATGTCGACCACCCGTTGCCCGCGACCGAGCGCCTG
TTGGAGTTTGCAAAGGAGAGGTGGCAGAATCTGGCATTCAAGCAGATGTC
GTACGGCATGTACTGTCCCCCTGAAGCCATCTGCGGAGAAATGAAGCTTG
ACGCACCGCAGATGCTGGATGAACCCGGTGGCCTAGATCTTCTCATGCAG
GTTGAGCTTGACGCACCGCAGATGCTGGATGAACCCGGTGGCCTAGATCT
TCTCATGCAGGTTGAGGACATTTTGGCTGGATATACGGCAGTGGGTATCA
TGGAACACTGGGAGCTGTCGATGGAGCTCTTCAACGCCCGCGTGCGGTCT
CCCGTGCGTGAGTGGAACAAGTTCAAACAGAGCAACCCGGGGTCAATGTC
CGGACTTCGCGATGAGGTTCTTCAATGGGCTCACGAAAACCCGGAAATTC
ACCGGGTGTTAGCAACAGATATGTTGTTGTACTCCTTTGCGCTCTCCATT
TTCAAGCAACAGACGACGGCAGCCCTCGGTACGAACTGGCGTTAGGACAT
TTTGGCTGGATATACGGCAGTGGGTATCATGGAACACTGGGAGCTGTCGA
TGGAGCTCTTCAACGCCCGCGTGCGGTCTCCCGTGCGTGAGTGGAACAAG
TTCAAACAGAGCAACCCGGGGTCAATGTCCGGACTTCGCGATGAGGTTCT
TCAATGGGCTCACGAAAACCCGGAAATTCACCGGGTGTTAGCAACAGATA
TGTTGTTGTACTCCTTTGCGCTCTCCATTTTCAAGCAACAGACGACGGCA
GCCCTCGGTACGAACTGGCGTTAG
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