mRNA_E-fasciculatus_F_contig14668.3349.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI) HSP 1 Score: 327 bits (837), Expect = 2.740e-109 Identity = 163/174 (93.68%), Postives = 169/174 (97.13%), Query Frame = 1
Query: 4 VKEMVPDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
VKEMVPDM+LAQRCWVAVHQQDPAAAA ILDTVKERNMGPWY SLCHQHPSLFPLDA+L AKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKA+AYAAY+TITEKAKI TGKKIDAIMAKTRVA FHLDTPQVKAGL+AAKKMIDLGGDWDRRNRLKV+
Sbjct: 36 VKEMVPDMNLAQRCWVAVHQQDPAAAASILDTVKERNMGPWYASLCHQHPSLFPLDAALAAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKASAYAAYETITEKAKIFTGKKIDAIMAKTRVAFFHLDTPQVKAGLEAAKKMIDLGGDWDRRNRLKVY 209
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.550e-42 Identity = 86/175 (49.14%), Postives = 114/175 (65.14%), Query Frame = 1
Query: 10 EMVPDMDLAQRCWVAVH---QQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
E VPDM +AQ +V QD A AA +D + +NM P+Y++LC + P F LD +LL +M+ N I + AE+ GD+EVLDA F A +AR+GD+ AA AA++ I E+AKISTG++IDA MA RV LFH D P VK L +AKK+++ GGDWDRRNRLKV+
Sbjct: 27 EQVPDMAVAQLAFVVTSGRGTQDDAKAA--MDIITAKNMAPFYKALCAKSPQHFALDDALLQRMEAENAKTLAEIDAAQEMAEKDSGDVEVLDAMFARAAHYARIGDRDAALAAHKAIVERAKISTGRRIDAAMATVRVGLFHSDMPAVKEALASAKKLVEAGGDWDRRNRLKVY 199
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2DUN5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUN5_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.770e-41 Identity = 86/174 (49.43%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 19 PDMDLAQR-----CWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
PDMDLAQ+ C + + A IL VK+ M P+Y+ LC + + +D +LLA+M N E + ET+ E+ +G+ EVLDA F +AK +AR+GDK+ A+AAY TI EKAK+STGKKIDA M K RVALF+LDT K +DA KK+ + GGDWDRRNR+KV+
Sbjct: 14 PDMDLAQKVFLLECGLDSPEVLEATKTEILSVVKQDAMAPYYEFLCARFS--WNVDDALLAEMTAANTTELAELKETVSGHEQHDGETEVLDALFAIAKFFARIGDKSQAFAAYDTIIEKAKVSTGKKIDAGMHKLRVALFYLDTSAAKKFIDAVKKLAENGGDWDRRNRIKVY 185
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.450e-35 Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 7 KEMVPDMDLAQRCWVA-VHQQDPAAAAG-------ILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
++ VPDM LAQ + + Q P +L +K P Y S+C + +P+DA+L A++K NEAE +I E L+ A E GDMEVLDA K +AR+G+K AAYAA I K KISTGK+IDA M K R+ LF DT K L+ AKK+++ GGDWDRRNRLKV+
Sbjct: 29 RKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLG-WPVDAALQAELKASNEAELAKIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVY 208
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.950e-34 Identity = 79/172 (45.93%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 19 PDMDLAQRCW---VAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
P+MDLAQ + A + A I++ V+ M P+Y L ++ F D +LLA++K N E + L+ AE+ G+ EVLDA F +A ARVGDK AY A+ I +K K+STGKKIDA MAK RVALF +DT + L +AKK+++ GGDWDRRNRLKV+
Sbjct: 34 PNMDLAQTVFQLEAAAPAELDGLRAQIVEVVRADKMAPYYTYLIGKYG--FAADDALLAELKAANAEELAALQAALEDAEQNHGETEVLDALFGIASFHARVGDKDEAYTAFDIIVDKPKVSTGKKIDASMAKLRVALFFMDTDTARKLLRSAKKLVEDGGDWDRRNRLKVY 203
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.090e-34 Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 19 PDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPL--DASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
P M LAQ + PA+ ILD V +R M P+Y +C + F + D SL AKMK+ N AE ++ + AE +GDMEVLDA F+ AK AR+GD+ AYAA I E+ KISTGK+IDA+M K RVALF D K L+ A+++ GGDWDR NRL +
Sbjct: 21 PPMSLAQSVFRHGRNPTPASEKEILDLVTQRQMAPYYARVC----AAFGISKDESLYAKMKDANAAEIAALAAKKEDAEANQGDMEVLDALFDAAKYHARIGDRDGAYAACDVIVERPKISTGKRIDAVMLKIRVALFFDDVGNAKKQLEDARRLAADGGDWDRNNRLSAY 187
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2V782_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V782_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.800e-34 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 7 KEMVPDMDLAQRCWVAVH-----QQDPAAAAGI-------LDTVKERNMGPWYQSLCHQH----PSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
+ +VPD++LA++ ++ + DP A I ++ V+ MG +Y++ P+LFP D +L+ ++ + A+ + + E + AE+ +G+ EVLDA F +AK+WAR GDK AYAAY I K+ + KK+DA MA+ RVALFH+D +K L+ ++ + GGDWDRRNRLKV+
Sbjct: 20 ESVVPDLELARKIFLLEYYVRSGDADPEGAKSIEKLKKQIVEQVESDGMGAFYETTLSSSSGSAPALFPADPALVKRLTDATAAKAKELEEQKEDAEKNQGETEVLDALFAVAKLWARAGDKEKAYAAYDAILAMPKVGSSKKLDAQMARARVALFHMDLTTLKGDLEECSRLNEAGGDWDRRNRLKVY 208
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: F0XX66_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX66_AURAN) HSP 1 Score: 132 bits (331), Expect = 7.610e-34 Identity = 77/167 (46.11%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 25 MDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
M LAQ+ + + P I T+++ MGP+Y+ +C + +P+DA+LL MK N AE + + AE+ +GDMEVLDA F+ K ARVG KA AYAA I ++ KISTGK+IDA+M K RV+LF +D K L AKKM + GGDWDR NRL V+
Sbjct: 1 MTLAQQVFRQGREPTPELEKEIRATIEKGEMGPYYEHVCAKFG--WPVDAALLEGMKAKNAAELAALVAKKEDAEKNQGDMEVLDALFDAVKFHARVGAKAEAYAACDAIRDRPKISTGKRIDALMMKIRVSLFFVDVAACKEQLAEAKKMAEDGGDWDRNNRLSVY 165
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.040e-32 Identity = 76/180 (42.22%), Postives = 103/180 (57.22%), Query Frame = 1
Query: 10 EMVPDMDLAQRCWV--------AVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
E +PDM LA + ++ A A AA + + ++E+NM P Y C + D +L A+M+ N AE + + +AE GDME+LDA F AK +AR+GD A AAY I ++ KISTGKKIDA MAK R+ LFH V L+ A +++ GGDWDRRNRLKV+
Sbjct: 33 EQIPDMVLAGKLFLLEAEVPHYAAAIDREAVAAEVQEIIREKNMAPLYAECCRTFG--WTKDEALEAEMRAANAAELKAAEDDKASAETNAGDMEILDAMFRKAKHFARIGDADEALAAYAAIVDQPKISTGKKIDATMAKVRLGLFHRRKDVVAENLEKAHALVEDGGDWDRRNRLKVY 210
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S1U4R5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4R5_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.310e-30 Identity = 81/180 (45.00%), Postives = 103/180 (57.22%), Query Frame = 1
Query: 10 EMVPDMDLAQRCWV--------AVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
E VP+M LA + ++ A A A +L ++E+ M P Y+ C ++ + DA+L + M+ N AE E AE GDMEVLDA F AK +ARVGD AA AY I E+ KISTGKKIDA MAK RVALF V L+AA K+++ GGDWDRRNRLK +
Sbjct: 35 EQVPNMALAAKLFLLDAEVPSYAEPVDTAAVKAEVLAAIEEKRMAPLYKRCCERYG--WEKDAALESAMEADNAAEVAAADEDKANAETNAGDMEVLDALFRKAKHYARVGDIDAALEAYTAIVEQPKISTGKKIDATMAKIRVALFAQRKEAVAELLEAAYKLVEEGGDWDRRNRLKCY 212 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14668.3349.1 >prot_E-fasciculatus_F_contig14668.3349.1 ID=prot_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=171bp MVPDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFback to top mRNA from alignment at E-fasciculatus_F_contig14668:50..2312+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14668.3349.1 ID=mRNA_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2263bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14668:50..2312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14668:50..2312+ >mRNA_E-fasciculatus_F_contig14668.3349.1 ID=mRNA_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1026bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14668:50..2312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |