mRNA_E-fasciculatus_F_contig14668.3349.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14668.3349.1
Unique NamemRNA_E-fasciculatus_F_contig14668.3349.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 2.740e-109
Identity = 163/174 (93.68%), Postives = 169/174 (97.13%), Query Frame = 1
Query:    4 VKEMVPDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            VKEMVPDM+LAQRCWVAVHQQDPAAAA ILDTVKERNMGPWY SLCHQHPSLFPLDA+L AKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKA+AYAAY+TITEKAKI TGKKIDAIMAKTRVA FHLDTPQVKAGL+AAKKMIDLGGDWDRRNRLKV+
Sbjct:   36 VKEMVPDMNLAQRCWVAVHQQDPAAAASILDTVKERNMGPWYASLCHQHPSLFPLDAALAAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKASAYAAYETITEKAKIFTGKKIDAIMAKTRVAFFHLDTPQVKAGLEAAKKMIDLGGDWDRRNRLKVY 209          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.550e-42
Identity = 86/175 (49.14%), Postives = 114/175 (65.14%), Query Frame = 1
Query:   10 EMVPDMDLAQRCWVAVH---QQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            E VPDM +AQ  +V       QD A AA  +D +  +NM P+Y++LC + P  F LD +LL +M+  N      I    + AE+  GD+EVLDA F  A  +AR+GD+ AA AA++ I E+AKISTG++IDA MA  RV LFH D P VK  L +AKK+++ GGDWDRRNRLKV+
Sbjct:   27 EQVPDMAVAQLAFVVTSGRGTQDDAKAA--MDIITAKNMAPFYKALCAKSPQHFALDDALLQRMEAENAKTLAEIDAAQEMAEKDSGDVEVLDAMFARAAHYARIGDRDAALAAHKAIVERAKISTGRRIDAAMATVRVGLFHSDMPAVKEALASAKKLVEAGGDWDRRNRLKVY 199          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2DUN5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUN5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.770e-41
Identity = 86/174 (49.43%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   19 PDMDLAQR-----CWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            PDMDLAQ+     C +   +   A    IL  VK+  M P+Y+ LC +    + +D +LLA+M   N  E   + ET+   E+ +G+ EVLDA F +AK +AR+GDK+ A+AAY TI EKAK+STGKKIDA M K RVALF+LDT   K  +DA KK+ + GGDWDRRNR+KV+
Sbjct:   14 PDMDLAQKVFLLECGLDSPEVLEATKTEILSVVKQDAMAPYYEFLCARFS--WNVDDALLAEMTAANTTELAELKETVSGHEQHDGETEVLDALFAIAKFFARIGDKSQAFAAYDTIIEKAKVSTGKKIDAGMHKLRVALFYLDTSAAKKFIDAVKKLAENGGDWDRRNRIKVY 185          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.450e-35
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 1
Query:    7 KEMVPDMDLAQRCWVA-VHQQDPAAAAG-------ILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            ++ VPDM LAQ   +  + Q  P            +L  +K     P Y S+C +    +P+DA+L A++K  NEAE  +I E L+ A E  GDMEVLDA     K +AR+G+K AAYAA   I  K KISTGK+IDA M K R+ LF  DT   K  L+ AKK+++ GGDWDRRNRLKV+
Sbjct:   29 RKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLG-WPVDAALQAELKASNEAELAKIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVY 208          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.950e-34
Identity = 79/172 (45.93%), Postives = 106/172 (61.63%), Query Frame = 1
Query:   19 PDMDLAQRCW---VAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            P+MDLAQ  +    A   +     A I++ V+   M P+Y  L  ++   F  D +LLA++K  N  E   +   L+ AE+  G+ EVLDA F +A   ARVGDK  AY A+  I +K K+STGKKIDA MAK RVALF +DT   +  L +AKK+++ GGDWDRRNRLKV+
Sbjct:   34 PNMDLAQTVFQLEAAAPAELDGLRAQIVEVVRADKMAPYYTYLIGKYG--FAADDALLAELKAANAEELAALQAALEDAEQNHGETEVLDALFGIASFHARVGDKDEAYTAFDIIVDKPKVSTGKKIDASMAKLRVALFFMDTDTARKLLRSAKKLVEDGGDWDRRNRLKVY 203          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 4.090e-34
Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 1
Query:   19 PDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPL--DASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            P M LAQ  +       PA+   ILD V +R M P+Y  +C    + F +  D SL AKMK+ N AE   ++   + AE  +GDMEVLDA F+ AK  AR+GD+  AYAA   I E+ KISTGK+IDA+M K RVALF  D    K  L+ A+++   GGDWDR NRL  +
Sbjct:   21 PPMSLAQSVFRHGRNPTPASEKEILDLVTQRQMAPYYARVC----AAFGISKDESLYAKMKDANAAEIAALAAKKEDAEANQGDMEVLDALFDAAKYHARIGDRDGAYAACDVIVERPKISTGKRIDAVMLKIRVALFFDDVGNAKKQLEDARRLAADGGDWDRNNRLSAY 187          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S2V782_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V782_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.800e-34
Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 1
Query:    7 KEMVPDMDLAQRCWVAVH-----QQDPAAAAGI-------LDTVKERNMGPWYQSLCHQH----PSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            + +VPD++LA++ ++  +       DP  A  I       ++ V+   MG +Y++         P+LFP D +L+ ++ +   A+ + + E  + AE+ +G+ EVLDA F +AK+WAR GDK  AYAAY  I    K+ + KK+DA MA+ RVALFH+D   +K  L+   ++ + GGDWDRRNRLKV+
Sbjct:   20 ESVVPDLELARKIFLLEYYVRSGDADPEGAKSIEKLKKQIVEQVESDGMGAFYETTLSSSSGSAPALFPADPALVKRLTDATAAKAKELEEQKEDAEKNQGETEVLDALFAVAKLWARAGDKEKAYAAYDAILAMPKVGSSKKLDAQMARARVALFHMDLTTLKGDLEECSRLNEAGGDWDRRNRLKVY 208          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: F0XX66_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX66_AURAN)

HSP 1 Score: 132 bits (331), Expect = 7.610e-34
Identity = 77/167 (46.11%), Postives = 103/167 (61.68%), Query Frame = 1
Query:   25 MDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            M LAQ+ +    +  P     I  T+++  MGP+Y+ +C +    +P+DA+LL  MK  N AE   +    + AE+ +GDMEVLDA F+  K  ARVG KA AYAA   I ++ KISTGK+IDA+M K RV+LF +D    K  L  AKKM + GGDWDR NRL V+
Sbjct:    1 MTLAQQVFRQGREPTPELEKEIRATIEKGEMGPYYEHVCAKFG--WPVDAALLEGMKAKNAAELAALVAKKEDAEKNQGDMEVLDALFDAVKFHARVGAKAEAYAACDAIRDRPKISTGKRIDALMMKIRVSLFFVDVAACKEQLAEAKKMAEDGGDWDRNNRLSVY 165          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.040e-32
Identity = 76/180 (42.22%), Postives = 103/180 (57.22%), Query Frame = 1
Query:   10 EMVPDMDLAQRCWV--------AVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            E +PDM LA + ++        A      A AA + + ++E+NM P Y   C      +  D +L A+M+  N AE +   +   +AE   GDME+LDA F  AK +AR+GD   A AAY  I ++ KISTGKKIDA MAK R+ LFH     V   L+ A  +++ GGDWDRRNRLKV+
Sbjct:   33 EQIPDMVLAGKLFLLEAEVPHYAAAIDREAVAAEVQEIIREKNMAPLYAECCRTFG--WTKDEALEAEMRAANAAELKAAEDDKASAETNAGDMEILDAMFRKAKHFARIGDADEALAAYAAIVDQPKISTGKKIDATMAKVRLGLFHRRKDVVAENLEKAHALVEDGGDWDRRNRLKVY 210          
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Match: A0A7S1U4R5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4R5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.310e-30
Identity = 81/180 (45.00%), Postives = 103/180 (57.22%), Query Frame = 1
Query:   10 EMVPDMDLAQRCWV--------AVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLFPLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLDAAKKMIDLGGDWDRRNRLKVF 525
            E VP+M LA + ++        A      A  A +L  ++E+ M P Y+  C ++   +  DA+L + M+  N AE     E    AE   GDMEVLDA F  AK +ARVGD  AA  AY  I E+ KISTGKKIDA MAK RVALF      V   L+AA K+++ GGDWDRRNRLK +
Sbjct:   35 EQVPNMALAAKLFLLDAEVPSYAEPVDTAAVKAEVLAAIEEKRMAPLYKRCCERYG--WEKDAALESAMEADNAAEVAAADEDKANAETNAGDMEVLDALFRKAKHYARVGDIDAALEAYTAIVEQPKISTGKKIDATMAKIRVALFAQRKEAVAELLEAAYKLVEEGGDWDRRNRLKCY 212          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14668.3349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRX3_ECTSI2.740e-10993.68PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z177_9STRA1.550e-4249.1426S proteasome subunit RPN7-domain-containing prot... [more]
A0A7S2DUN5_9STRA1.770e-4149.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CYL3_9STRA1.450e-3545.86PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2B949_9STRA3.950e-3445.93Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A7V7_9STRA4.090e-3446.20Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S2V782_9STRA5.800e-3438.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XX66_AURAN7.610e-3446.11PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7R9YET5_9STRA5.040e-3242.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U4R5_9STRA1.310e-3045.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14668contigE-fasciculatus_F_contig14668:50..2312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue1.7e-85
Seed eggNOG ortholog2880.D8LRX3
Preferred nameRPN7
KEGG rclassRC00149
KEGG koko:K00134,ko:K03037,ko:K08869
KEGG ReactionR01061
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03050,ko04066,ko05010,ko05169,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map03050,map04066,map05010,map05169
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00341,M00552
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016020,GO:0019538,GO:0019941,GO:0030163,GO:0032991,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.proteasome-mediated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG5187@1,KOG0687@2759
EC1.2.1.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03051,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProteasome component (PCI) domain
Ec32 orthologEc-08_002770.1
Exons4
Model size525
Cds size513
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14668.3349.1prot_E-fasciculatus_F_contig14668.3349.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14668 62..2312 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927951.2008862-UTR-E-fasciculatus_F_contig14668:49..611622927951.2008862-UTR-E-fasciculatus_F_contig14668:49..61Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14668 50..61 +
1695995763.7815967-UTR-E-fasciculatus_F_contig14668:49..611695995763.7815967-UTR-E-fasciculatus_F_contig14668:49..61Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14668 50..61 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927951.2140653-CDS-E-fasciculatus_F_contig14668:61..2801622927951.2140653-CDS-E-fasciculatus_F_contig14668:61..280Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 62..280 +
1695995763.798127-CDS-E-fasciculatus_F_contig14668:61..2801695995763.798127-CDS-E-fasciculatus_F_contig14668:61..280Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 62..280 +
1622927951.228762-CDS-E-fasciculatus_F_contig14668:985..10781622927951.228762-CDS-E-fasciculatus_F_contig14668:985..1078Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 986..1078 +
1695995763.8101802-CDS-E-fasciculatus_F_contig14668:985..10781695995763.8101802-CDS-E-fasciculatus_F_contig14668:985..1078Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 986..1078 +
1622927951.2437959-CDS-E-fasciculatus_F_contig14668:1586..17061622927951.2437959-CDS-E-fasciculatus_F_contig14668:1586..1706Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 1587..1706 +
1695995763.8202076-CDS-E-fasciculatus_F_contig14668:1586..17061695995763.8202076-CDS-E-fasciculatus_F_contig14668:1586..1706Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 1587..1706 +
1622927951.2627692-CDS-E-fasciculatus_F_contig14668:2231..23121622927951.2627692-CDS-E-fasciculatus_F_contig14668:2231..2312Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 2232..2312 +
1695995763.8293614-CDS-E-fasciculatus_F_contig14668:2231..23121695995763.8293614-CDS-E-fasciculatus_F_contig14668:2231..2312Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14668 2232..2312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14668.3349.1

>prot_E-fasciculatus_F_contig14668.3349.1 ID=prot_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=171bp
MVPDMDLAQRCWVAVHQQDPAAAAGILDTVKERNMGPWYQSLCHQHPSLF
PLDASLLAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWAR
VGDKAAAYAAYQTITEKAKISTGKKIDAIMAKTRVALFHLDTPQVKAGLD
AAKKMIDLGGDWDRRNRLKVF
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mRNA from alignment at E-fasciculatus_F_contig14668:50..2312+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14668.3349.1 ID=mRNA_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2263bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14668:50..2312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGTGAAGGAGATGGTGCCCGACATGGACCTGGCGCAGCGCTGCTGGGT GGCGGTCCACCAGCAAGACCCCGCGGCGGCGGCCGGCATCCTGGACACGG TCAAGGAGAGGAACATGGGTCCCTGGTACCAGAGCCTGTGCCACCAGCAC CCGTCCCTGTTCCCGCTCGACGCGTCGCTGTTGGCGAAGATGAAGGAGGT CAACGAGGCAGAGAAGGAGCGCATATCGGAGGTGTGACCGACCGACCGAC CGACCGACCGATCGACCACCTGTTGAAGAGATGCTTGCAGGCACCCCACC CGCCCGTGCTAATGTTGTTGTGCGTGTTCGTGTTTTTTGTGCGGAGCGTA ACGCCTCGGGTTTTGTGGAGAACCGCGACCTTGAGGTTTGACCTCAACGG ATGAAGTTGGTTTGGGGGGGGCGGGGTCAACAAACCGTAGACGCTCTTAC TGTACGGCGTGTTGGCGGAAGTCGCTGTAAAGACGGATGAAAATCGTCAC ACGAAGGTTGTTGGTGCACATGCATGCTGCTGGAGATTCGAGCGGAGCTG GGCAGTATTGTTGGCCATGTTTTGTCTCTTGTCTTTCTGTGCGCGGGGGA GGGAGGGATGGATGTGTGTGACGGCTGGTACTGTGAGTGTTGTTTTGCCT TGGTGGTAGAGATACGAGTTCGCTTTTCACGGCAACACCATGCCTACCTA AAGTTGACAACAGTTTCCGCACACACACACACACACACACCGTATAGGCT TCCCTATGCAGCCCCCTCACGGGGTTCCAGTTCATGTTTGTGCTTTCAAC TGCACTGAGACTGACATATTTTCTTTTGGTCGGCCGGTTAGCGCGGTCTT TGCTAGTGGTAAAGACGCACGCACGCCAAACCCTACCTGATTCGCGCACG ACTGCCTCCCCGCTCCCATTGCTATTGCAACTGCAGACATTAAAGGCAGC GGAGGAAGGAGAGGGCGACATGGAAGTTTTGGACGCGCAGTTCGAGATGG CGAAGATGTGGGCAAGAGTAGGAGACAAGGTATCTACAGTTATCTACAGT TGAAACTTCCCAGAGGCCAGGTACTGCTGTACACACGCAGATACATGCCG CAGCAAGGATGTCACGCGGGGGTGTTGGTTTGAGTCTTGTCCTTTCGCAA GTTGATTTCGAACCCAGGGATTGGACCCTCCCTGTCGCCCAATCTCCTCC CCCCCCCCCCCCCTGCCGGCGGGGAACCCTTTCACTCGAAGGCGTGTTTT CGTTTTCCCCGATGCTCGCGTTGTTCGCGTTTTTTATCACACTAGCCTAC TGAGACTGGTGTATTTTTCTGTCAGCCGATTAGCGGGGTCGATGCCAAGC ATAAAGAAGACATACGGACGCATGCGCACAAACAAGCTGGTTATTATTTG TTGGTTGGTTGAATATCCCCCCTTTCTCGACCCATCTCCCGCAAAATTGT GGACAAACATACCAACAACTAACACATAACAACAACAACATACGAACATA CACGCGTGCGCGCGCCCGCACATACACGCACACACAGGCGGCGGCGTACG CGGCGTACCAGACCATCACCGAGAAGGCCAAGATCTCTACGGGGAAGAAG ATCGATGCCATCATGGCCAAGACGAGGGTGGCCCTCTTCCACCTCGACAC TCCGCAGGTGATGCTCCCTCGCATGTATGTATGTACTGTAGGTGGCGTGT AGTCTTGTGACCGCCCCTTGGCGTAGCGTGACACCCCCCCCCCTGTCACG CGCCCCTCTCTTTGAGGCGGTGGACACGATTATTTCTTGAGTTGTGTGAA GTATTCCCGTGCTGTTGGTTTCATTGAGAAGTTTTTCGACACTCTTGAGG AGGACTCGACTTACTCTGGTGGCCCTCAAATCTGACCCCACCTGCATGTT TCGTCGCCGAAAGGATTGGACTGATGACAGTTGACGTGGCCGATCGTGAG GGGGGTGCTAGGCCCAGAGAGAGATGTAAAACAACCGCTAGCACTTTCCG CACCTTACAGCACATGTACGATGTCCTCCATGCTTATTCTGCTTATTCCA TTCACGTATGTATTATTGGGCGAGGCCGAAATTAATGCAATAGTAAATGA CCCCGATTTAAAATGCAAACACCCGCCACCCGCACGCACGGTACCCATTT CCTGCTTTGTTTCGTGTGTGTGTTTGGTTCAGGTGAAGGCGGGACTTGAC GCGGCGAAGAAGATGATCGACCTTGGTGGGGACTGGGACCGACGTAACCG CTTGAAGGTATTC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14668:50..2312+

>mRNA_E-fasciculatus_F_contig14668.3349.1 ID=mRNA_E-fasciculatus_F_contig14668.3349.1|Name=mRNA_E-fasciculatus_F_contig14668.3349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1026bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14668:50..2312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTGCCCGACATGGACCTGGCGCAGCGCTGCTGGGTGGCGGTCCACCA
GCAAGACCCCGCGGCGGCGGCCGGCATCCTGGACACGGTCAAGGAGAGGA
ACATGGGTCCCTGGTACCAGAGCCTGTGCCACCAGCACCCGTCCCTGTTC
CCGCTCGACGCGTCGCTGTTGGCGAAGATGAAGGAGGTCAACGAGGCAGA
GAAGGAGCGCATATCGGAGATGGTGCCCGACATGGACCTGGCGCAGCGCT
GCTGGGTGGCGGTCCACCAGCAAGACCCCGCGGCGGCGGCCGGCATCCTG
GACACGGTCAAGGAGAGGAACATGGGTCCCTGGTACCAGAGCCTGTGCCA
CCAGCACCCGTCCCTGTTCCCGCTCGACGCGTCGCTGTTGGCGAAGATGA
AGGAGGTCAACGAGGCAGAGAAGGAGCGCATATCGGAGACATTAAAGGCA
GCGGAGGAAGGAGAGGGCGACATGGAAGTTTTGGACGCGCAGTTCGAGAT
GGCGAAGATGTGGGCAAGAGTAGGAGACAAGACATTAAAGGCAGCGGAGG
AAGGAGAGGGCGACATGGAAGTTTTGGACGCGCAGTTCGAGATGGCGAAG
ATGTGGGCAAGAGTAGGAGACAAGGCGGCGGCGTACGCGGCGTACCAGAC
CATCACCGAGAAGGCCAAGATCTCTACGGGGAAGAAGATCGATGCCATCA
TGGCCAAGACGAGGGTGGCCCTCTTCCACCTCGACACTCCGCAGGCGGCG
GCGTACGCGGCGTACCAGACCATCACCGAGAAGGCCAAGATCTCTACGGG
GAAGAAGATCGATGCCATCATGGCCAAGACGAGGGTGGCCCTCTTCCACC
TCGACACTCCGCAGGTGAAGGCGGGACTTGACGCGGCGAAGAAGATGATC
GACCTTGGTGGGGACTGGGACCGACGTAACCGCTTGAAGGTATTCGTGAA
GGCGGGACTTGACGCGGCGAAGAAGATGATCGACCTTGGTGGGGACTGGG
ACCGACGTAACCGCTTGAAGGTATTC
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