mRNA_E-fasciculatus_F_contig1466.3342.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: D8LFM1_ECTSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM1_ECTSI) HSP 1 Score: 1735 bits (4493), Expect = 0.000e+0 Identity = 1114/1599 (69.67%), Postives = 1159/1599 (72.48%), Query Frame = 1
Query: 1 QDPLVSILVRVRWTDLREGLVEESQHYTTLEPLPPEETLGGAGGADEGYSGAGVGGSWFVTPRRAIYAIETPPFEIVWKQQRKPXXXXXXXXXXXXXXXXXXXXXXXXXXHGGRLGDACSRLLAALVLTTAMHPGTLMADLGAGPLEDGRTAMAQDYGKAASAMLSDETRKAVEEMCRRSQSPSIKHDEIDLILRYLLHSQEEERVFAPAASQGCGGESSGVDADGDNKARRVQPSPPPSRWRQVHLGTQQQDRRQSTEKWKQVYPRARGVTDDSPKRQLQPEGGATEPVSVPNDPSHGDGNGTMETSWPKLSTRGSGSASSDETTMGGREGRRSLWAWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARMSPIAAVDGTSMFDRGASCSGQDRSVASQLRGSRQADGGSADGSDYCSGGDGSLLPWSDRSPLVLYPDTRTCLIWQKLQMLNCCRAEGTSQVDLQ-PSPPPSQDVGEGAPDQGGGEKGPGDXXXXXXXXXXXXXXXXXXXXXXXXXIGGGVQDDQCSAGGVDKGGECSAEDDGVSVAADSRTGEVVTEGGVQDKHGGDRDAGGNAGGVCAETGTVEDDEAVTSAATSGDGNSAAESAAVGDYASGLSGCNGDLPKDASENHPQQQQRGEGSSAPVFDDEAAEITPASTA--TAVDLSKTGAGREELGVTGGAVEIMEDGDDSMCSSSSRSGVDGEEITSPGETATETAASPIARPSSAGTEEVATIPALAPAAAARLGEGAPASPASSSPVPSLGDDANEALPCAAATETAVIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRTDSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSPPAPPPSMETGVRTDEVPPDGDGDDDSDGFAFKDTPPSSPXXXXXXPEEETPGTTHASSAAAGDAITD-RSTCTSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------------------ISEALPEERTAIIAMENSPDAPDKAIGCPEVAPTAATESAAVVGDEPLVPSMRRLLCTGAAVRPPRLQESGPVTEDMLRQQTLGQAAAYRGREVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRLAWPGQGQVVWRPAVTGRQVHGQLRDEAAPEAAAADELSSGDHLVVPPAPPSAFTLAGWLSCWGQAGAAVQAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLGAGSLPGVEVSVDTARRKVAKAVELLSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANLDTAEEGSREGSRDRSSLSPFRSALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEEXXXXXGEVLVSARSHKEFLRDLLLAQGIQKTPGSELDDLLASYDEEHXXXXXXXXXXXXXXXXXXXXXQTKEYVLRCQTPAPFYSPNVGRGQMAAYPTPPSRMYAKTDGSNLRVALSLCESDI 4725
+DPLVSI VRVRWTDLREGLVEESQHYTTLEPLP EE GAGGAD GYSGAGVGG WFV+PR GRLGDACSRLLAALVLTTAMHPGTLMADLGAG LEDGRTA+AQDYGKAASA LSDETRKAVEEMCRRSQSPSI HD+IDLILRYLLHSQ EER PAA+QG GG G DADGDNKARRVQP P SRWRQVHLG +QQD RQSTEKWKQVYPRARGVTDDS KR+LQP GGA EP SVPNDPSHGD N TME SW +LS GSG ASS ET GGR GRRSLWAWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARMSPIAAVDGTSMFDRGASC+GQDRSVASQLRGS QADGGS D SD SGGDGSL PWSDRS LV YPDTRTCLIWQKLQMLNCCRAEG +Q+ LQ SPPPSQDVG+G DQG GEKGPGD GGG+QDD+CSAG VD+GGE SAEDD V +AD TGEV T GGV+D+HGGDRDA +AGGV AE G ED E V SAATSGD NSAAES AVGD A LSGCN LPKDASEN PQQQQRGEGSSA V DDE AEITPASTA TAVDLSK GAGREELGVTG AV ++E GDD SSSS G+DGEE SPG+T TETAASPIA P SAGTEEVA +P+LA +RLGEG PASP SSSPVPSLGDDANEALPCA ATET +I QQ DSPSXXXXXXXXXXXXXXXX +PSSPP+ PP METG RTDEVP +G DD SDG A KDTPP P PEEETP TT +S AAAG+ I+D RSTC SPK XXXXXXXXXXXXXXX ISEALPE+RTAIIAMENSPDA DKA GCPE APTAAT SAA VG+EPLVP MRRLLC+GAAVRPPRLQE GPVTEDMLRQQTLGQAAAYRGREVLLADMTAFR+EN GGGDG AAVFADFVRWYRPECWQEATA+G WVSASEGR+GGRAEDDKRLAWPGQGQVVWR AVTGRQVHGQ RDEA PEAAAADELS GDHL +PPA PS FTLAGWLSCWGQAGAAV+AEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVF+LEEACLGA SLP VE SVDTAR +ALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEE GEV VSAR HKEFLRDLLLAQGIQKTPGSELD+LLASYDEEH XXXXXXXXXXXXXXXXXXXX+TKEYVLRCQTPAPFYS NVGRGQM AYPTPPSRMYAKTDGSNLRVALSLCESDI
Sbjct: 226 EDPLVSIFVRVRWTDLREGLVEESQHYTTLEPLP-EEARAGAGGADGGYSGAGVGGHWFVSPR-------------------------------------------------GRLGDACSRLLAALVLTTAMHPGTLMADLGAGSLEDGRTALAQDYGKAASAKLSDETRKAVEEMCRRSQSPSINHDDIDLILRYLLHSQGEERAVVPAANQGSGG---GPDADGDNKARRVQPPLPSSRWRQVHLGARQQDPRQSTEKWKQVYPRARGVTDDSSKRRLQPGGGAAEPASVPNDPSHGDVNRTMEASWAELSASGSGRASSYETMTGGRGGRRSLWAWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARMSPIAAVDGTSMFDRGASCTGQDRSVASQLRGSSQADGGSVDVSDDGSGGDGSLPPWSDRS-LVPYPDTRTCLIWQKLQMLNCCRAEGGAQMGLQLSSPPPSQDVGDGTADQGEGEKGPGDDEDEEAFFDTREYYQTSEDEGSSGGTGGGLQDDRCSAGDVDRGGERSAEDDDVLASADRGTGEVGTGGGVRDEHGGDRDADDSAGGVRAEPGAGEDYEGVISAATSGDSNSAAESDAVGDRAGDLSGCNEGLPKDASENRPQQQQRGEGSSAQVLDDETAEITPASTAAATAVDLSKLGAGREELGVTGRAVTVVEGGDDRR-SSSSTGGIDGEETVSPGDTTTETAASPIAPPLSAGTEEVAVVPSLA----SRLGEGEPASPTSSSPVPSLGDDANEALPCAVATETTMI--GPEEEDVATIVAATSDEAMSVDEGGDNPTTQNMPEAEREEGEKEVGGKDEEELQQGADSPSXXXXXXXXXXXXXXXX-----------EPSSPPSSPPPMETGARTDEVPRNGSADDGSDGLACKDTPP--PSSSPANPEEETPDTTKSSLAAAGEVISDDRSTCPSPKASTMAAGEAISEISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISEALPEKRTAIIAMENSPDASDKAFGCPEAAPTAATGSAAAVGEEPLVPPMRRLLCSGAAVRPPRLQECGPVTEDMLRQQTLGQAAAYRGREVLLADMTAFRSEN-GGGDGDAAVFADFVRWYRPECWQEATADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVWRSAVTGRQVHGQNRDEA-PEAAAADELSPGDHLGLPPALPSPFTLAGWLSCWGQAGAAVRAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFVLEEACLGADSLPSVEASVDTAR-----------------------------------------------------------------------------------------------------TALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEEEKGG-GEVPVSARPHKEFLRDLLLAQGIQKTPGSELDELLASYDEEHRXXXXXXXXXXXXXXXXXXXXETKEYVLRCQTPAPFYSRNVGRGQMEAYPTPPSRMYAKTDGSNLRVALSLCESDI 1646
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE) HSP 1 Score: 1616 bits (4184), Expect = 0.000e+0 Identity = 1111/1508 (73.67%), Postives = 1162/1508 (77.06%), Query Frame = 1
Query: 1 QDPLVSILVRVRWTDLREGLVEESQHYTTLEPLPPEETLGGAGGADEGYSGAGVGGSWFVTPRRAIYAIETPPFEIVWKQQRKPXXXXXXXXXXXXXXXXXXXXXXXXXXHGGRLGDACSRLLAALVLTTAMHPGTLMADLGAGPLEDGRTAMAQDYGKAASAMLSDETRKAVEEMCRRSQSPSIKHDEIDLILRYLLHSQEEERVFAPAASQGCGGESSGVDADGDNKARRVQPSPPPSRWRQVHLGTQQQDRRQSTEKWKQVYPRARGVTDDSPKRQLQPEGGATEPVSVPNDPSHGDGNGTMETSWPKLSTRGSGSASSDETTMGGREGRRSLWAWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARMSPIAAVDGTSMFDRGASCSGQDRSVASQLRGSRQADGGSADGSDYCSGGDGSLLPWSDRSPLVLYPDTRTCLIWQKLQMLNCCRAEGTSQVDLQPSPPPSQDVGEGAPDQGGGEKGPGDXXXXXXXXXXXXXXXXXXXXXXXXXIGGGVQDDQCSAGGVDKGGECSAEDD--GVSVAADSRTGEVVTEGGVQDKHGGDRDAGGNAGGVCAETGTVEDDEAVTSAATSGDGNSAAESAAVGDYASGLSGCNGDLPKDASENHPQQQQRGEGSSAPVFDDEAAEITPASTA--TAVDLSKTGAGREELGVTGGAVEIMEDGDDSMCSSSSRSGVDGEE---------ITSPGETATETAASPIARPSSAGTEEVATIPALAPAAAARLGEGAPASPASSSPVPSLGDDANEALPCAAATETAVIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRTDSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSPPAPPPSMETGVRTDEVPPDGDGDDDSDGFAFKDTPPSSPXXXXXXPEEETPGTTHASSAAAGDAITDRSTCTSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISEALPEERTAIIAMENSPDAPDKAIGCPEVAPTAATESAAVVGDEPLVPSMRRLLCTGAAVRPPRLQESGPVTEDMLRQQTLGQAAAYRGREVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRLAWPGQGQVVWRPAVTGRQVHGQLRDEAAPEAAAADELSSGDHLVVPPAPPSAFTLAGWLSCWGQAGAAVQAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLGAGSLPGVEVSVDTARRKVAKAVELLSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ISANLDTAEEGSREGSRDRSSLSPFRSALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEEXXXXXGEVLVSARSHKEFLRDLLLAQGIQKTPGSELDDLLAS 4482
+DPLVSI VRVRWTDLREGLVEESQHYTTLEPLP EE GGAGGAD YSGAGVGG XXXXXXXXXXXXXXXXXXXXXH GRLGDACSRLLAALVLTTAMHPGTLMADLGAG LEDGRTA+AQDYGKAASAMLSDETRKAVE+MCRRS+SPSI HD+IDLILRYLLHSQ EE A AA+QGCGG +DADG+NKARRVQPS P SRWRQVHLGT+QQDRRQSTEKWKQVYPRARGVTDDS RQLQPEGGA E SVPND SH D +GTME SW +LST GSG ASSDET MGGREGRRSLW WAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM+PI AVDGTSMFD ASC+GQDRSVASQLRGSRQADGG ADGSD SG DGSL PWSD S LVLYPDTRTCLIWQKLQMLNCCRAEG QVDLQPSPPPSQDVG+GA DQGGGEKGPGD IGGG+QDDQC AG V +GGEC AEDD GV A+ S GE T GGVQD H GDRDA AGGV AE SAATSGDGNSAAES AVGD+A GLSGCN DLPKDASENHPQQQQR EGSSAPV DDE AEITPA TA TAVDLSK G GREELGV G A+ I+EDGDD RSG I S G+TA ET ASPIA P SAGT+EVA +PALAPA A +L EG PASP SS LGDDANEALPCA AT+ +I XXXXXX QQR DSP XXXXXXXXXXXXXXXXXXXXXXXXX PSSPP+ PP METG RT EVP +GDGDD SDGFA +DTPP S PEEE PGT AS AAAG+ ++DR TC SPK XXXXXXXXXXXXXXXXXXXXXXXX PE++TAIIAM+NSP+A D A+G PEVAPTAA+ S A VGD PLVP MRRLLC+GAAVRPPRLQESGPVTEDML+QQTLGQA AYRGREVLLADMTAFRAENDGG D AAVFADFVRWYRPECWQE TA+G WVSASEGR+GGRAEDDKRLAWPGQGQVVW+P+VTG Q GQ DE PEA AADELS GDHL +PPA PS F LAGWLS WGQAGAAVQAE XXXXXXXXXXXX LFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLGAGSLP V SVDTARRKV +AVELLSSA XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX ISA+L+TA E SRE SRDRSSLSPFR+ALLAADGACVAVKRAETALSRAVSLQRSLPGK+DLVNDMVAACGDEE GEVLVSAR HKEFLRDLLLAQGIQKTPGSELD+LLAS
Sbjct: 226 EDPLVSIFVRVRWTDLREGLVEESQHYTTLEPLP-EEARGGAGGADGSYSGAGVGGH-----------------------------CDNXXXXXXXXXXXXXXXXXXXXXHRGRLGDACSRLLAALVLTTAMHPGTLMADLGAGSLEDGRTALAQDYGKAASAMLSDETRKAVEDMCRRSKSPSINHDDIDLILRYLLHSQGEEGAVATAANQGCGG----LDADGNNKARRVQPSLPSSRWRQVHLGTRQQDRRQSTEKWKQVYPRARGVTDDSSLRQLQPEGGAAERTSVPNDQSHRDVHGTMEASWAELSTSGSGRASSDETMMGGREGRRSLWVWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARMNPITAVDGTSMFDWSASCTGQDRSVASQLRGSRQADGGGADGSDDSSGRDGSLPPWSDHS-LVLYPDTRTCLIWQKLQMLNCCRAEGAPQVDLQPSPPPSQDVGDGAADQGGGEKGPGDDEDEEAFFDTREYYQTSEDEGSSGDIGGGLQDDQCGAGDVGRGGECGAEDDARGVVAASISGAGEGGTVGGVQDGHDGDRDADDKAGGVHAEPXXXXXXXXXLSAATSGDGNSAAESDAVGDHADGLSGCNEDLPKDASENHPQQQQRDEGSSAPVLDDETAEITPAPTAAATAVDLSKIGVGREELGVAGVAIAIVEDGDD-------RSGXXXXXXXXXXXXXXIISSGDTA-ETVASPIAPPLSAGTDEVAAVPALAPATATQLREGEPASPTSSXXXXXLGDDANEALPCAVATKKTMIRPEEEDVATAVAATPDEAMSVNEGGDNPTTQNMLKAEREEGEKXXXXXXEEEL--QQRVDSPFEEXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPPSSPPPMETGARTVEVPRNGDGDDCSDGFASEDTPPPS---SSANPEEEMPGTAKASLAAAGEVVSDRYTCASPKASIXXXXXXXXXXXXXXXXXXXXXXXXS-------PEKQTAIIAMDNSPEALDNALGRPEVAPTAASGSTAAVGDGPLVPPMRRLLCSGAAVRPPRLQESGPVTEDMLKQQTLGQAPAYRGREVLLADMTAFRAENDGG-DRDAAVFADFVRWYRPECWQETTADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVWKPSVTGHQGQGQNWDET-PEADAADELSPGDHLGLPPALPSPFKLAGWLSYWGQAGAAVQAEKEXXXXXXXXXXXXPLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLGAGSLPSV--SVDTARRKVVEAVELLSSASTTATHDDAXXXXXXXXXXXXXXXXXLLEGRRDNGCSGGAXXXXXXXXXXXXXXXXXXXXXXXISASLETAAEVSRESSRDRSSLSPFRTALLAADGACVAVKRAETALSRAVSLQRSLPGKRDLVNDMVAACGDEEEKGG-GEVLVSARPHKEFLRDLLLAQGIQKTPGSELDELLAS 1673
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: A0A2G5EUW2_AQUCA (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EUW2_AQUCA) HSP 1 Score: 63.9 bits (154), Expect = 3.230e-6 Identity = 69/258 (26.74%), Postives = 100/258 (38.76%), Query Frame = 1
Query: 3115 SAAVVGDEPLVPSMRRLLCTGAAVRPPRLQESGPVTEDMLRQ-----QTLGQAAAYRG---REVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRLAWPGQGQVVWRPAVTGRQVHGQLRDEAAPEAAAADELSSGDHLVVPPAPPSAFTLAGWLSCWGQAGAAVQAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLG 3864
SA VVG L+ S +R+ P Q++ +TEDM + + LG ++ G +++L +DM+AF+A N AVF DF+RW+ P W+ A E + R GG + +R+ WP +G++ R + HG L W W A +E L EGEK LH+LETI P LL Q+L S L + G
Sbjct: 579 SAGVVGSMMLLNSYQRM-------HAPYTQDAPIMTEDMHEERLRAVEALGNTFSFSGQLEKDILSSDMSAFKAANPD------AVFEDFIRWHSPGDWETAEFE-------DQRSGGYEMEGQRVDWPPRGRLSTRMSE-----HGNL----------------------------------WRRIWNDVPALPASEQKP------------LLDPNREGEKILHYLETIRPHQLLQQMLCTAFRASADTLNQTSFG 765
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: A0A834YW62_9MAGN (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YW62_9MAGN) HSP 1 Score: 62.0 bits (149), Expect = 1.250e-5 Identity = 68/258 (26.36%), Postives = 96/258 (37.21%), Query Frame = 1
Query: 3115 SAAVVGDEPLVPSMRRLLCTGAAVRPPRLQESGPVTEDMLRQ-----QTLGQA---AAYRGREVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRLAWPGQGQVVWRPAVTGRQVHGQLRDEAAPEAAAADELSSGDHLVVPPAPPSAFTLAGWLSCWGQAGAAVQAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLG 3864
SA VVG L+ S ++ V P Q++ +TEDM + + LG + +A R+ L +DM+AF+A N AVF DF+RW+ P W+ EG GR A + R WP +G++ R + G W W A A +E L EGEK LH+LET+ P LL Q++ G S L + G
Sbjct: 565 SAGVVGSMMLLNSHQK-------VHAPFTQDAPLMTEDMHEERLRAVEALGNSFSLSAQLERDTLSSDMSAFKAANPD------AVFEDFIRWHSPGDWENDATEG------SGRSRSHATEGLRDDWPPRGRLSQRMSENGNS---------------------------------------WWRIWNNAPALPASEQKP------------LLDPNREGEKILHYLETVRPNQLLEQMVCTAFGASADSLNQTSFG 752
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: K7MQ70_SOYBN (Rab3 GTPase-activating protein catalytic subunit n=19 Tax=Phaseoleae TaxID=163735 RepID=K7MQ70_SOYBN) HSP 1 Score: 61.6 bits (148), Expect = 1.640e-5 Identity = 65/238 (27.31%), Postives = 93/238 (39.08%), Query Frame = 1
Query: 3130 GDEPLVPSMRRLLCTGAAVRPPRLQESGPVTEDMLRQQTLGQAA--------AYRGREVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRLAWPGQGQVVWRPAVTGRQVHGQLRDEAAPEAAAADELSSGDHLVVPPAPPSAFTLAGWLSCWGQAGAAVQAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSA 3819
G +V SM LL + ++ P QE+ +TEDM ++ A A R++L +DM+AF+A N G A+F DF+RW+ P W+E G S+S + D +WP QG++ R + HG L W W A A +E L EGEK LH+LET+ P LL Q++ A
Sbjct: 573 GSAGIVDSMM-LLKSHQSMHAPYTQEAPLMTEDMHEERLKAVEAFGDSFDFSAQLERDILTSDMSAFKAANPG------AIFEDFIRWHSPGDWEEDDGPEGSKSSSSSSHDIKKSKD---SWPPQGRLSKRMSE-----HGNL----------------------------------WRKLWNSAPALPASEQKP------------LLDPNREGEKVLHYLETLQPHELLEQMVCA 749
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Match: A0A1S8VIK7_9FUNG (Rab3 GTPase-activating protein catalytic subunit n=4 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VIK7_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 2.940e-5 Identity = 48/121 (39.67%), Postives = 59/121 (48.76%), Query Frame = 1
Query: 3160 RLLCTGAAVRPPRLQESGPVTEDMLRQQ--------TLGQAAAYRGR---EVLLADMTAFRAENDGGGDGGAAVFADFVRWYRPECWQEATAEGGWVSASEGRVGGRAEDDKRL---AWPG 3480
RL+ TG + P QESG +TEDM+R+Q T AA R R L++DM AF+A N G A+ DFVRW+ P W E E G V GR+ GR D L W G
Sbjct: 823 RLIATGEQMYEPHTQESGYMTEDMVREQEQILESLGTNAAAAKLRARMQCSQLVSDMEAFKAANPG------ALLEDFVRWHSPRDWIE---EAGQV----GRLSGRMTDPGNLWRECWEG 930 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1466.3342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1466.3342.1 >prot_E-fasciculatus_F_contig1466.3342.1 ID=prot_E-fasciculatus_F_contig1466.3342.1|Name=mRNA_E-fasciculatus_F_contig1466.3342.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1445bp MHPGTLMADLGAGPLEDGRTAMAQDYGKAASAMLSDETRKAVEEMCRRSQback to top mRNA from alignment at E-fasciculatus_F_contig1466:5029..17827- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1466.3342.1 ID=mRNA_E-fasciculatus_F_contig1466.3342.1|Name=mRNA_E-fasciculatus_F_contig1466.3342.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12799bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1466:5029..17827- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1466:5029..17827- >mRNA_E-fasciculatus_F_contig1466.3342.1 ID=mRNA_E-fasciculatus_F_contig1466.3342.1|Name=mRNA_E-fasciculatus_F_contig1466.3342.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8670bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1466:5029..17827- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |