mRNA_E-fasciculatus_F_contig1464.3336.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 782 bits (2020), Expect = 1.480e-274 Identity = 418/568 (73.59%), Postives = 458/568 (80.63%), Query Frame = 1
Query: 7 EVVGDEACEGADDDESNGVVIDTASNLQVAEGGKIFLRNILLRSGEIDAENGPHNRQCQGESSSRNNGFLEKENGRGADDARVSGNGVLLLALVVLIAMALCMPRAGAGGQPLQEEEAEQHGIVDYRDVIELDEAANFGMRGEGRGGERRLPVAPFDSSCPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSAPDVEGFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMASWDDEYTVYRRWNNTDDQLAEMMTFDVVGFEQCTAGRP 1710
EVVGDE CEGADDDE+NG + ASN QV E G L + ++ ENG H++ E S + NGF ENGR DDARV G GVLLL L+VL MALCM G GG+ E+ HG VD D+IELD+ N G RGEGRGG+RRLPV PF SSCPYAIP +EE ERSG +S PGNVVVV DF+YCRLGNRF SMSRSLSLGYCCKSRL+SLPPKD++LAPGRFN+GIPGPRNFDFSSAPDVEGFD SSCPPEI WGG +AF+L+GLRD+ HPYYTP LF C+KELPRI GCEAAYFFP DMAVDMCPLDET ERD+NN VRD+ EK R DAPGV LDW +GQGRE T XXXXXXXXXXXXXXXXX SAGNLVVHVRSGDIF+ P HPDYGQPPLQYYVRAIQDQEWDR+DVVT+GIVDE HAINPVVPALEAK A+GEL GNIHFHKNRT+GEDLR MICADGFVAA+STLRHVVSHHSSAKRMYFP AC+E L+TL TERP TQVFGMASW+D+YTVY+RWNNT DQL EMMTFDV GFEQCTA RP
Sbjct: 4 EVVGDEGCEGADDDENNGGRV--ASNPQVTETGSTLLGRV------VEGENGAHDQ----EHSPKRNGFFA-ENGRRGDDARVPGKGVLLLRLIVLATMALCMSWVGGGGKI--EQNTALHGTVDDGDLIELDDI-NLGTRGEGRGGKRRLPVVPFSSSCPYAIPSEEEARERSGN--------TSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREAT---XXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFVRP-HPDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGMASWNDQYTVYQRWNNTADQLTEMMTFDVGGFEQCTARRP 543
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 764 bits (1973), Expect = 1.610e-267 Identity = 407/570 (71.40%), Postives = 451/570 (79.12%), Query Frame = 1
Query: 1 MAEVVGDEACEGADDDESNGVVIDTASNLQVAEGGKIFLRNILLRSGEIDAENGPHNRQCQGESSSRNNGFLEKENGRGADDARVSGNGVLLLALVVLIAMALCMPRAGAGGQPLQEEEAEQHGIVDYRDVIELDEAANFGMRGEGRGGERRLPVAPFDSSCPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSAPDVEGFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMASWDDEYTVYRRWNNTDDQLAEMMTFDVVGFEQCTAGRP 1710
M EV GDE CEGADD E+NG + AS+ +VAE G IFL SG ++AENG H+ + SSR+NGF E ENGR DDARVSG GVLLL LVVL MALCM G GG+ + +HGI D RD++ELDE N G RGE RGG+RRLP+APF SSCPYAI +EEGHERS R G GG +S PGNVVVV DF+YCRLGNRF+SM RSLSLGYCCKSRLVSLPPKDD+LAPGRFNDG PGPRNFDFSSAPDVEGFD+SSCPPEI+WGG AF+L GLRD+ HPYYTPGLF C+KELP I GCEAAYFFPTDMAV MCPLDET E NK VRDI EK + DAPG+ LDW G GRE T+ XXXXXXXXXXX SAGNLV+HVRSGDIF+SP HP YGQ YYV+AIQDQ+WDR+DVVTNGI D+NHAINP+VPALEAK AKG+LPGNIHFHKNRTM EDL SMICADGFVAA+STL VVSH SSAKRMYFP++C+E L+ LGTE P TQVFGMASWD EYTV+RRWNNT DQ+AEMMT DV GFEQCTA RP
Sbjct: 1 MQEVGGDEGCEGADDYENNGGRV--ASDRKVAERGNIFL------SGVVEAENGAHDEEY----SSRSNGFFE-ENGRRGDDARVSGKGVLLLGLVVLATMALCMSWVGGGGKT--QRNTAEHGIGDDRDLMELDEI-NLGTRGEDRGGKRRLPIAPFSSSCPYAILAEEEGHERSDRGGDGG--NTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAE--GGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQ--------XXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGMASWDHEYTVFRRWNNTADQIAEMMTADVGGFEQCTASRP 538
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 375 bits (962), Expect = 2.840e-116 Identity = 205/434 (47.24%), Postives = 267/434 (61.52%), Query Frame = 1
Query: 442 GGERRLPVAPFDSSCPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSAPDVEGFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRG--KGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADG-FVAAKSTLRHVVSHHSSAKRMYFPSAC------------DETLETLGTERPRTQVFGMASWDDE-YTVYRRWNNTDDQLAEMMTFDVVGFEQC 1695
GG+ + F+ CPY + G RD ++PGNV+ +NDF + RLGNRF ++ +L LGYCCKS+LVSLP KDD LAPG F +G PGPR +DF++APDVEGFDASSCP +I WGG +AF+L GL + +HPYY+P L CV+ +PR+TGCEAAYFFP M VD+C D T D ++ + R G PGV + G + +GR A LV+HVRSGDIF+ P P YGQPPLQYYVRAI+ Q+WDR+D+VTNG + + +NPV+PALE A+GEL GNI+FHK+RTM ED SM+C G V A+S+L +++HHSSA R+YFP C D +L L E +V+G+ E Y++ WNNT DQ+ EM+TF+V FEQC
Sbjct: 110 GGQDQRRHFAFNPDCPYIL--RTPGERLRMRD-------PAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFP--MGVDVCLSDRTATGDVVHEQRGNGASGRSG--PGVKKNLVGSEEEEGRP-------------------------ANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTFNVSSFEQC 505
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 313 bits (801), Expect = 3.040e-94 Identity = 177/406 (43.60%), Postives = 232/406 (57.14%), Query Frame = 1
Query: 484 CPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSAPDVEGFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMA-SWDDEYTVYRRWNNTDDQLAEMMTFDVVG-FEQC 1695
C YAIP + ++ S++ GNVV V + R GNRF+++ R+L+LGYCCK++ V LPPKDD LAPG FN+G PGPR FDFSSAPDV+G D CP +I W A + GL + Y P + C+ + PR+ GCEAAY+FP D+AV CP R P + L R G AGNLV+HVRSGDIF P GQPPLQ+Y+ +QDQ WDRIDVVTNG +N +NPVVPAL A A G LP N++FH R+MGEDL+SM+CAD AKS+L + +S+HS+A R+Y+P C+ L L RP+T+V+G+ Y+VYR W NT +Q AEM+ ++V F++C
Sbjct: 59 CTYAIPNAKVARKQRH--------DSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP---------------------RKKKPFLALGDRNPPGG---------------------------AGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDN--VNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 404
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 315 bits (806), Expect = 2.180e-93 Identity = 194/453 (42.83%), Postives = 241/453 (53.20%), Query Frame = 1
Query: 460 PVAPFDSSCPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSAPDVEGFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSA---------------------------------------GNLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMASWDDEYTVYRRWNNTDDQLAEMMTFD-VVGFEQCT 1698
P + CPY I EE R + S+PGNVV V +CR GN F S R+L+LGYCCKS++V LPPKDD LAPG FN G PGPR FDFSSAPDV+GFD+S+C +I W G AF++ L H ++TPGL C+ PR+ CEAAY+FP D VD+C XXXXXXXXXXXXXXXXXXX GNLV+HVRSGDIF YGQPPLQ+Y++ IQ +WD +D+VTN E+ +NPV+PAL+A G+LP ++H H NRTM EDL SM CADG A+STL + HS AKR+Y P C+ + L RP Q +G+ W EY VY+ W NT +Q EM+ +D +VGF QC+
Sbjct: 86 PGVSLEGGCPYVIDTAEEAISR--------IKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKD--VDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNS--QEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGI-DWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQCS 525
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 155 bits (392), Expect = 7.420e-37 Identity = 125/444 (28.15%), Postives = 188/444 (42.34%), Query Frame = 1
Query: 478 SSCPYAIPPDEEGHERSGRDGGGGVGTSSMPGNVVVVNDFDYCRLGNRFISMSRSLSLGYCCKSRLVSLPPKDDELAPGRFNDG--IPGPRNFDFSSA-PDVEGFDASS-----CPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHP-----DYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACD----------------ETLETLGTERPRTQVFGMASW---DDEYTVYRRWNNTDDQLAEMMTFD-VVGFEQCTAGRP 1710
+ CP A+ + DGG + N + + F R GN F+ +S L++G+CC+SRL++LP D + PG G G R FDFS P GF+ C P++E G +AF + L C+ + + GCE AY CP E P KR+G AG+LVVH+RSGDIF +P ++GQPPLQYY+ + +++WD + +T AINP LE + G L N+ KNR++ ED+R M+CAD ++S++ + HS A + P+ C + L E+P +V+G A W +Y+VY+ W++T +QL EM TF + G ++C+ P
Sbjct: 87 AGCPQAL---SRSQAEAALDGG------NSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSR--------LLRCMNRV-YLRGCEKAYLGKMVDLEGFCPKQE--------------PGKRKG------------------------------------------AGSLVVHIRSGDIF-NPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAW--NQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTA-WPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKCSVHPP 451
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI) HSP 1 Score: 147 bits (372), Expect = 2.660e-35 Identity = 114/395 (28.86%), Postives = 172/395 (43.54%), Query Frame = 1
Query: 649 LGYCCKSRLVSLPPKDDELAPGRFNDGIPGPRNFDFSSA----PDVE--GFDASSCPPEIEWGGIDAFYLRGLRDDTHPYYTPGLFACVKELPRITGCEAAYFFPTDMAVDMCPLDETVERDNNNKYVRDIPEKRRGDAPGVHLDWRGKGQGREFTDDGXXXXXXXXXXXXXXXXXXXSAGNLVVHVRSGDIFISPPHPD--------YGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHVVSHHSSAKRMYFPSACD----------------ETLETLGTERPRTQVFGMASW---DDEYTVYRRWNNTDDQLAEMMTFD-VVGFEQCTAGRP**DRTTD 1731
+G+CC+SRL++LP DD+L P ++ R FDFS+ P+ + G D C PE + GG AF +D HP L C+ + + GCE AY CP E P KR+G AG+LV H+RSGDIF +PD +GQPPLQYY+R + ++WD + +T E+ A+NP LE + G L N+H NRT+ D++ M+CAD ++S++ + HS A + P+ C + L E+ ++VFG+ W +Y+VY+ W ++ QL EM T+ + G ++CT P ++TD
Sbjct: 1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGY----EDVHPK----LLECMNRV-YLRGCEKAYLGKLVDVGSFCPKQE--------------PGKRKG------------------------------------------AGSLVAHIRSGDIF----NPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAW--EDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGV-DWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKCTVYPPAPPQSTD 322
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: A0A835Z9K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.420e-11 Identity = 54/189 (28.57%), Postives = 82/189 (43.39%), Query Frame = 1
Query: 1177 LVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDE-NHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKSTLRHV-VSHHSSAKRMYF--------------------PSACDETLETLGTERPRTQVFGMA---SWDDEYTVYRRWNNTDDQLAEMMT 1668
LVVH+RSGDI+ PH YGQPPL Y + + W +I +VT + H ++PA+ ++ + + DLR+++CA VA+ STL + + H+ + +Y P A ++ L RP +F M W YT Y W NT Q EM++
Sbjct: 86 LVVHLRSGDIWSEKPHKRYGQPPLSSYAAVLAHRSWKKILIVTEPTPELLRHPFAAILPAMVRQTVADTV-------QILDFTSDLRTLLCARALVASHSTLTTMYLMHNQRLQSLYADALMHGTQLHNVNGQEVCSAPGAAVLSVSDLLAARPSLSIFLMPLSEEWTPTYTPYGAWKNTYAQRVEMLS 267
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: A0A6C0HT03_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HT03_9ZZZZ) HSP 1 Score: 65.1 bits (157), Expect = 9.680e-8 Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 1174 NLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKST-LRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMASWDDEYTVYRRWNNTDDQLAEMMTFDVV 1680
+LV+H+RSGD+F PHP Y PPL YY I+ ++ I +++ +NP + L A L NI F K +++ ED++ ++ A V + T + ++ + K +Y PS + + + R + + D+ Y + W NT Q M+++ +
Sbjct: 103 DLVIHIRSGDLFQKNPHPKYLTPPLSYYKDIIERNNYENIYLISED------TLNPCINKLLA------LYPNIKF-KLQSLEEDIKLILGASNIVISYGTFIPQLLDFSDNIKCIYVPSYLNNYKKEY-FKINRDCIVKTSKLDEYYKLMIPWKNTQAQHKTMLSYQTI 258
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Match: A0A6I3G5T6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3G5T6_9ACTN) HSP 1 Score: 65.1 bits (157), Expect = 2.520e-7 Identity = 43/170 (25.29%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 1174 NLVVHVRSGDIFISPPHPDYGQPPLQYYVRAIQDQEWDRIDVVTNGIVDENHAINPVVPALEAKSAKGELPGNIHFHKNRTMGEDLRSMICADGFVAAKST-LRHVVSHHSSAKRMYFPSACDETLETLGTERPRTQVFGMASWDDEYT---VYRRWNNTDDQLAEMMTF 1671
+LV+H+R GD+F YGQPPL +Y R + ++ W + +V D+N + P + +A+ ++P H K +GED+ ++ A VA + T + VV + KR+++ ++ P ++ ++ + Y + W N+D Q M+T+
Sbjct: 198 HLVIHLRGGDVFGPRKPASYGQPPLAFYQRILDNERWSAVTIVHQD--DKNPVLRPFLETCKAR----KVPVTTHSGK---VGEDIAELLRASTLVAGRGTFMPAVVGLSRNVKRVFY----FHDKFSIHPPVPGVEIIRISDVEGTYVRDVLSNNWENSDYQRKLMLTY 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1464.3336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1464.3336.1 >prot_E-fasciculatus_F_contig1464.3336.1 ID=prot_E-fasciculatus_F_contig1464.3336.1|Name=mRNA_E-fasciculatus_F_contig1464.3336.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=571bp MAEVVGDEACEGADDDESNGVVIDTASNLQVAEGGKIFLRNILLRSGEIDback to top mRNA from alignment at E-fasciculatus_F_contig1464:8274..14807+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1464.3336.1 ID=mRNA_E-fasciculatus_F_contig1464.3336.1|Name=mRNA_E-fasciculatus_F_contig1464.3336.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6534bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1464:8274..14807+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1464:8274..14807+ >mRNA_E-fasciculatus_F_contig1464.3336.1 ID=mRNA_E-fasciculatus_F_contig1464.3336.1|Name=mRNA_E-fasciculatus_F_contig1464.3336.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3426bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1464:8274..14807+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |