prot_E-fasciculatus_F_contig1462.3328.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1462.3328.1
Unique Nameprot_E-fasciculatus_F_contig1462.3328.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length167
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1462.3328.1 vs. uniprot
Match: D8LKF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF3_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 3.180e-52
Identity = 150/166 (90.36%), Postives = 153/166 (92.17%), Query Frame = 0 
Query:    1 MQVRKGWMLALAFLCSCLLNPGVASSSSASATPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGTVVAWALFTVLFGVALLMFLYNREQNKRLRARHGDFLRQSLASSDTMNPPYHQAEQLPGHKPDPTMSSF 166
            MQVRKGWMLALAFLCSCLLNPGVASSSS+SATPS XXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXX     SRGTVVAWA FTVL GVALLMFLYNREQNKRLRA+ GDFLRQSLAS+DTMNPPYHQ E LPGHKPDPTMSSF
Sbjct:    1 MQVRKGWMLALAFLCSCLLNPGVASSSSSSATPSPXXXXXXXXXXXXXXXXXXXXXXXXXSAXXXXXXXXXXXXXXXXXXXXXXXXXXXT----SRGTVVAWAFFTVLLGVALLMFLYNREQNKRLRAQRGDFLRQSLASNDTMNPPYHQPEPLPGHKPDPTMSSF 162
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1462.3328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF3_ECTSI3.180e-5290.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..98
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.826
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1462contigE-fasciculatus_F_contig1462:11273..14067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1462.3328.1mRNA_E-fasciculatus_F_contig1462.3328.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1462 11273..15308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1462.3328.1 ID=prot_E-fasciculatus_F_contig1462.3328.1|Name=mRNA_E-fasciculatus_F_contig1462.3328.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp
MQVRKGWMLALAFLCSCLLNPGVASSSSASATPSPASTPSPASTPSPGAT
PSPGATPSPGGTPAPTGGTPSPGGSSSSSSTSSTSSSSSSSSSTSRGTVV
AWALFTVLFGVALLMFLYNREQNKRLRARHGDFLRQSLASSDTMNPPYHQ
AEQLPGHKPDPTMSSF*
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