prot_E-fasciculatus_F_contig1462.3327.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1462.3327.1
Unique Nameprot_E-fasciculatus_F_contig1462.3327.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length252
Homology
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.120e-125
Identity = 202/252 (80.16%), Postives = 205/252 (81.35%), Query Frame = 0
Query:    1 MAKFVDTGRRLPLSCKRSSRL-PRSWCAVLLSLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAPASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSPFGPLENFKALVARGALRAKKIVVSEIEKGTPMWMVCLSAVAVLVVATVFVATVLVGAKRPKED 251
            MAKF D GRRLP  CKRSSRL PRSWCAVLLSLVL                        XXXXXXXXXX  APASDIITVTSENFKETIKEGTWFVKFYTDWC HCQRLQPTWEELATELKGKVNV QVNCDRDYSLCRRFHV GYPTLVHVHNRR+RVYKKSRGKEALV FALNGYKKQVAVSALKSPFGPLENFKAL+AR ALRAKK VVS IEKGTPMWMVCL AVAVL      VA+VLV  KRPKED
Sbjct:    1 MAKFADAGRRLPQPCKRSSRLLPRSWCAVLLSLVLVPFLEIRGGSIVVAAAVATAGVAGXXXXXXXXXXXXAPASDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYKKSRGKEALVAFALNGYKKQVAVSALKSPFGPLENFKALIAREALRAKKFVVSTIEKGTPMWMVCLCAVAVLXXXXXVVASVLVSIKRPKED 252          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A5J4XL76_9CHLO (Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XL76_9CHLO)

HSP 1 Score: 111 bits (277), Expect = 7.570e-27
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0
Query:   73 ASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSP 188
            + ++ ++T  NF ++  EG W ++F+  WC HC+ L+ TW+ LA ELKGKVNVA+V+   +  L  RFHV G+PT+ HVH+   R Y   R  + L+DFAL  +K + A+   KSP
Sbjct:   27 SQNVRSLTDANFDQSTAEGAWLIEFFAPWCSHCRDLEATWDALADELKGKVNVAKVDGTSERGLLGRFHVEGFPTIFHVHDTETRPYTGKRTMQKLMDFALADWKAEPALPVWKSP 142          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.070e-26
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   69 LGAPASDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSP 188
            + A  SD++ +TS+NF+   +  T      WFVKFY  WC HC++L P W+ELATELKG VNVA+V+ +   SL +RF + GYPTL+     +   Y++ R  E+LV FA  GYK       + +P
Sbjct:   23 VAAEESDVVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLIFFSQGKMYKYEEKRSLESLVAFAKGGYKDDTEAVDVPAP 148          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A0G4FAB9_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAB9_VITBC)

HSP 1 Score: 103 bits (257), Expect = 2.240e-23
Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   74 SDIITVTSENFKETIKE------GTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKK 178
            S +  +T  NF+   +       G WF++FY +WC HCQRLQPTWEELA  LKG+V VA+V+CD + S   RF++ G+PTL+ +   R   YK +R   AL  FA  GYKK
Sbjct:   28 SAVRVLTDANFEHDTQASSGATTGDWFIEFYANWCGHCQRLQPTWEELAANLKGRVVVAKVDCDANTSTRSRFNIQGFPTLLLLRQGRMYEYKGARDLAALEAFATGGYKK 138          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A7S2V1W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.890e-23
Identity = 64/183 (34.97%), Postives = 99/183 (54.10%), Query Frame = 0
Query:   74 SDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSPFGPLENFKALVARGALRAKKIVVSEIEKGTPMWMVCLSAVAVLVVATVFVATVLVGAKRPKE 250
            SD+I + +++F+   +  T      WFV+FY  WC HC+RL P WEE+ATELKG VNVA+V+  ++  L +RF V+G+PTL   H+ +   YK +R  EAL +F   GY +Q    A+  P      F   + +    AK +++ +I       +V L ++ V     + V  ++ G K  KE
Sbjct:   38 SDVIVLDNDSFEHLTQASTGATTGDWFVEFYAPWCGHCKRLTPVWEEIATELKGTVNVAKVDGTQNRKLLKRFGVSGFPTLKFFHHGKMYSYKGARTAEALTEFVKAGYAEQDG-EAVPPPPSFWSEFVEAIKKARGLAKDLIIHKITGEFNRPVVILVSLCVGSSLCIVVFALVFGIKSGKE 219          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: UPI000644C2D5 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C2D5)

HSP 1 Score: 100 bits (249), Expect = 2.510e-21
Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 0
Query:   74 SDIITVTSENFKETIKEG-TWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAV 182
            SD+I +T +NF + +K G +W ++FY  WC  C++L P +EELAT++KG VN+A+++C  + S C+R+ + GYPTL  V +     ++  R  EAL  + L GYK    V
Sbjct:   34 SDVIVLTDKNFDQNVKSGGSWLIEFYAPWCSFCKKLAPIYEELATKVKGNVNIAKIDCTVERSTCQRYEIMGYPTLKFVSSGVVYEHQGERTLEALEQYVLEGYKSSKTV 143          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A4UHA7_ALEFU (Protein disulfide-isomerase n=1 Tax=Alexandrium fundyense TaxID=2932 RepID=A4UHA7_ALEFU)

HSP 1 Score: 97.8 bits (242), Expect = 2.780e-21
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 0
Query:   73 ASDIITVTSENFKETIKE------GTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYK 177
            ASD++ +T +NF+   +       G WFVKFY  WC HC+ + P WE++ATELKG VNVA+V+      L +RF +  YPTL+    ++   Y   R K+AL+ +A  G++
Sbjct:   23 ASDVVELTDDNFEHDTQAASGATTGDWFVKFYAPWCGHCKSIAPIWEQVATELKGLVNVAKVDATVHQKLAKRFKIGSYPTLILFSQQKMYKYSGGRDKDALISYASVGFR 133          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A7AUH7_BABBO (Thioredoxin family protein n=1 Tax=Babesia bovis TaxID=5865 RepID=A7AUH7_BABBO)

HSP 1 Score: 98.2 bits (243), Expect = 3.050e-21
Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 0
Query:   69 LGAPASDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKS-RGKEALVDFALNGYKKQVA 181
            + A AS ++ +T  NF++  +  T      WFVKFY  WC HC+++ P WE LA ELKG VNVA ++  R  ++ +RF + GYPTL+ +   R   YK   R  E L  FA N YKK ++
Sbjct:   27 VNAEASAVVQLTDSNFEKLTQASTGATTGPWFVKFYAPWCSHCRQMAPAWERLAKELKGVVNVADLDATRAPNVAKRFAIKGYPTLLLIDKGRMYQYKNGDRSTEKLAAFATNDYKKALS 146          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A812WAE0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WAE0_SYMMI)

HSP 1 Score: 97.8 bits (242), Expect = 3.740e-21
Identity = 66/172 (38.37%), Postives = 87/172 (50.58%), Query Frame = 0
Query:   73 ASDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSPFGPLENFKALVARGALRAKKIVVSEIEKG---TPMWMVCLSAVAVLVVAT 235
            AS+++ +TS NF+   +  T      W V+FY  WC HC+RLQP WEELATELKG  NV +V+   +  L  RF + G+PT+      +   YK  R  EA V+F   GYK   +V+    P    E  K  V    L A+K    +I  G   TP   V    + VLVV T
Sbjct:   25 ASNVVVLTSANFEMETQASTGSTTGDWIVEFYAPWCGHCKRLQPVWEELATELKGIANVGKVDVTGNRDLGNRFDIKGFPTIKFFRQGQTYDYKGGRSLEAFVNFVKGGYKDAPSVATPDQPTW-FETTKKSVLTPFLAAQK----DIANGRYMTPNVFVVSMPILVLVVIT 191          
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Match: A0A024GCE2_9STRA (Thioredoxin domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024GCE2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.170e-21
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 0
Query:   73 ASDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVHVHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSP 188
            A++IIT+ S+NF++  +  T      W ++FY  WC HC RL P +EE+ATELKG +NVA+V+   +  L  RF++ GYPT++         YK+ R K+AL  F   GYK+   V  +K P
Sbjct:   23 ATNIITLDSDNFEKLTQASTGATTGDWLIEFYAPWCDHCNRLLPIFEEVATELKGTINVAKVDAIANRELGERFNIGGYPTIIFFRQGEMYKYKQERTKDALSHFTKEGYKQ---VEGVKVP 141          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1462.3327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H4_9PHAE1.120e-12580.16Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A5J4XL76_9CHLO7.570e-2743.10Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
A0A7S2WDG4_9STRA4.070e-2642.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4FAB9_VITBC2.240e-2346.85Thioredoxin domain-containing protein n=2 Tax=Vitr... [more]
A0A7S2V1W0_9STRA2.890e-2334.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI000644C2D52.510e-2140.91hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A4UHA7_ALEFU2.780e-2140.54Protein disulfide-isomerase n=1 Tax=Alexandrium fu... [more]
A7AUH7_BABBO3.050e-2141.67Thioredoxin family protein n=1 Tax=Babesia bovis T... [more]
A0A812WAE0_SYMMI3.740e-2138.37Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A024GCE2_9STRA4.170e-2140.98Thioredoxin domain-containing protein n=3 Tax=Albu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 76..171
e-value: 2.1E-23
score: 82.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 65..200
score: 12.992
NoneNo IPR availableGENE3D3.40.30.10coord: 60..212
e-value: 7.5E-36
score: 125.4
NoneNo IPR availablePANTHERPTHR45815FAMILY NOT NAMEDcoord: 47..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..38
NoneNo IPR availableTMHMMTMhelixcoord: 223..245
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 74..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1462contigE-fasciculatus_F_contig1462:6802..10997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1462.3327.1mRNA_E-fasciculatus_F_contig1462.3327.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1462 5987..11099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1462.3327.1 ID=prot_E-fasciculatus_F_contig1462.3327.1|Name=mRNA_E-fasciculatus_F_contig1462.3327.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp
MAKFVDTGRRLPLSCKRSSRLPRSWCAVLLSLVLVLFLETKSGSIVVAAA
AASAGAAGGSGKAKAGGGLGAPASDIITVTSENFKETIKEGTWFVKFYTD
WCKHCQRLQPTWEELATELKGKVNVAQVNCDRDYSLCRRFHVAGYPTLVH
VHNRRARVYKKSRGKEALVDFALNGYKKQVAVSALKSPFGPLENFKALVA
RGALRAKKIVVSEIEKGTPMWMVCLSAVAVLVVATVFVATVLVGAKRPKE
D*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain