prot_E-fasciculatus_F_contig14618.3326.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14618.3326.1
Unique Nameprot_E-fasciculatus_F_contig14618.3326.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length89
Homology
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.180e-44
Identity = 80/93 (86.02%), Postives = 82/93 (88.17%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQP---------QIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            DGAPKLGWHDTIAYMTIP+ILVITQSISTRIMQP KDPSQP          IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQ+
Sbjct:  262 DGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQI 354          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A7S3CUE8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CUE8_9SPIT)

HSP 1 Score: 114 bits (284), Expect = 5.350e-30
Identity = 55/87 (63.22%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPK---DPSQPQ---IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIR 85
            DG P +GWHD I+Y+ +P++LVI+QS+S RIMQP +   DP+Q Q   I+KFLPLMIGWFSL+VPS L LYWI NNF++TA SVF+R
Sbjct:    1 DGHPPIGWHDAISYLILPILLVISQSVSQRIMQPQQQTTDPAQQQTQAILKFLPLMIGWFSLNVPSGLTLYWITNNFLTTAQSVFLR 87          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A7S1FKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKR9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.460e-29
Identity = 51/90 (56.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPQ------IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            DGAP LGW DTIA+++IPLIL++ Q++ST++MQPPK+P  P       ++K LPL+IGWFSL+VPSALG+YWI N  +ST ++V I+N +
Sbjct:  289 DGAPSLGWEDTIAFLSIPLILIVLQAVSTQLMQPPKNPDDPNDPSNNVVLKALPLLIGWFSLNVPSALGIYWITNTLVSTLSTVLIKNSL 378          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.270e-28
Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPK------DPSQPQIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            +G P LGWHDT+ Y++IP+ILVITQSIS +++ PPK      D SQ  I+K+LPL+IGWFSL+VPS LGLYWI+NN +STA SV IR Q+
Sbjct:  251 NGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQ-AILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIRQQL 339          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A6V2GN73_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GN73_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.530e-27
Identity = 51/91 (56.04%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    3 RPDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPP-KDPSQPQ---IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQVR 89
            R DG P LGW +T+A++ IP+ILVI+Q +S ++MQP  +DP Q Q   I+KFLPLMIG+FSLSVP+ALG+YW+ NNF++TA ++ +RN ++
Sbjct:   70 RVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSEDPQQQQANAILKFLPLMIGYFSLSVPAALGIYWVTNNFVTTAITLSVRNSLK 160          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: R7QEJ8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEJ8_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 1.650e-27
Identity = 48/91 (52.75%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    2 PRPDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPQ----IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            P  +GAP +GWHD + Y+ +P+ILV +Q  S +++QPP D  Q Q    I+KF+PL+IGWFSL+VPS LG+YW+ NN +STA +V+IR+Q+
Sbjct:   94 PLVNGAPPIGWHDALCYLILPVILVASQFYSQKLIQPPSDDPQQQQTAKILKFMPLLIGWFSLNVPSGLGVYWVTNNLLSTAQTVYIRSQL 184          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A7S0L494_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L494_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 2.120e-27
Identity = 52/88 (59.09%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKD-PSQPQ---IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            DGAP LGW DT++Y+ +P++LVI+Q  ST ++ P  D P+Q Q   I+KFLPLMIGWFSL+VPS LGLYWI NN ++TAT++ IR  V
Sbjct:   20 DGAPPLGWSDTLSYLVLPVLLVISQYASTSLLTPKSDDPAQAQSQAILKFLPLMIGWFSLNVPSGLGLYWITNNVVTTATTLLIRRSV 107          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A4D9CYJ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.000e-27
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKD-PSQPQ---IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQ 87
            DG P LGWHDTIA++TIP+IL++TQSIS R++ PP D P   Q   ++K+LP+M+G+FSLSVPS LG+YWI NN ISTA S+ I+ +
Sbjct:  213 DGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEK 299          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: K0SWS0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SWS0_THAOC)

HSP 1 Score: 109 bits (273), Expect = 3.040e-27
Identity = 48/88 (54.55%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPQ----IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQV 88
            DG P LGW DTIA+++IP+ LVI+Q +S  +MQP  D  Q Q    I+K LP M+GWF+L+VPSALG+YW++NN ++TAT+++IRN +
Sbjct:  121 DGVPSLGWEDTIAFLSIPIFLVISQFVSMNLMQPKSDDPQQQQANIILKVLPFMVGWFALNVPSALGIYWVVNNVVTTATTLYIRNSM 208          
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Match: A0A7S0XYI9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYI9_HEMAN)

HSP 1 Score: 112 bits (280), Expect = 3.310e-27
Identity = 51/90 (56.67%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    5 DGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPK--DPSQPQ---IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQVR 89
            DGAP LGW DT+AY+++P+ILV+TQ+IS +++QPP+  DP+Q Q   I+KFLPLMIGWF+L+VP+ LG+YW++NN +ST    +IR Q +
Sbjct:  308 DGAPPLGWEDTLAYLSLPVILVVTQTISQKLLQPPQSDDPAQQQTQAILKFLPLMIGWFALNVPAGLGVYWVINNGLSTLQQWYIRQQFK 397          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14618.3326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI1.180e-4486.02Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A7S3CUE8_9SPIT5.350e-3063.22Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A7S1FKR9_9STRA6.460e-2956.67Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A835YLS0_9STRA1.270e-2862.22Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A6V2GN73_9STRA1.530e-2756.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
R7QEJ8_CHOCR1.650e-2752.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0L494_9EUKA2.120e-2759.09Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A4D9CYJ8_9STRA3.000e-2759.77Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K0SWS0_THAOC3.040e-2754.55Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S0XYI9_HEMAN3.310e-2756.67Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 14..85
e-value: 3.9E-13
score: 49.6
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 2..85
NoneNo IPR availablePANTHERPTHR12428:SF40ALBINO3-LIKE PROTEIN 1, CHLOROPLASTICcoord: 2..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..89
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14618contigE-fasciculatus_F_contig14618:93..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14618.3326.1mRNA_E-fasciculatus_F_contig14618.3326.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14618 93..972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14618.3326.1 ID=prot_E-fasciculatus_F_contig14618.3326.1|Name=mRNA_E-fasciculatus_F_contig14618.3326.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=89bp
LPRPDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPQIVKF
LPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18