mRNA_E-fasciculatus_F_contig14592.3307.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Match: A0A6H5JTL8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL8_9PHAE) HSP 1 Score: 1039 bits (2687), Expect = 0.000e+0 Identity = 678/824 (82.28%), Postives = 690/824 (83.74%), Query Frame = 1
Query: 1 MSALIATAGERPAGPGRGAQAAAALRRNAVAALGELLFYIVTQEPVGTGGGSRPAEGGGTETERWSIPVAAVAGVIGKCLPVADAGXXXXXXXXXXXX------RLFGHEG--HYAAKTMENVLAQVGPSHALVPALVTSELALGLLDLARHASSENLRCTAAAALYHVLGHDILGGEFSQD----------DXXXXXXLEVSSSIRSESAGRXXXXXXXXXXSDRAGDDVPAAGRVASRLMREPGAPEFIVQGLSAEGSSATSRRAFLGIFNLVVWASGSCGGGRAVGGGGPEDEGFDGGRRPNAPLILRRAVECMLDSQHLLLRLLRVAEHGEDAVLRAKGFLSLRLTLE-AADPDFLLKACRSRLLPLLARAIGGLAPRSAPRCPVAGAAAAGMPELSPQQEYLYECSTLLAEWLCAVPETAARRLVTELRKRRGVSAGGNGTMATTTRDGCDATGRWGRQSERSGGYRSGGGVPRRRVGAKQQAAATGTTELEAAMAMFPAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPAPGVAAAGTG---GXXXXXXXXXXXXXXXRAVSPAAGAPWSGGGSDDGSAGAVV-----LAALLPTVETLAQQAELVLAPHREAVSAELIPVLCRFLRSSSGDTRALVVAIFRVLLPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAEDRVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGTALLCSGRD----AAVAAALLDRLSEAPLSAALSPGGGGTRTGHEPPGDAAAVTTLDPALACLLTLLVDDGAGTTG 2379
MSALIATAGE PAGPGR AQAAAALRRNAVAALGELLFYIVTQEPVGTGGG G G ETERW+IPVAAVAGVIGKCL V D XXXXXXXXXXX RL GH+G HYAAKTMENVLAQVGPSH LVPALVT ELALGLLDLARHASSENLRCTAAAALYHV GHDILGGEF QD XXXXX +E S SI ESAGRXXXXXXXX SDRAGDDVPAAGRVASR+MREPGAPEFIVQGLSAEGS TSRRAFLG+FNLVVWASG+CGG RAVGGGG EDE F G R NAPL LRRAVECMLDSQHLLLRLLRVAEHGED VLRAKGFLSLRL LE AADP FLLKACRSRLLPLLARAIGGLAPRSAPRCP A AAAGMPELSPQQEYLYECSTLLAEWLCA+PE AARRL TELR+RRGVSA G+G ATT RDGCDA RWGRQSERSGGYRSG G P RR G QQAAA GT ELEAAM MFPAVVHLVNSPLLRERAVTR FVSDVAGCLALSCPA G+AAAGTG GXXXX RAVSPAAG PWSG G LAALLPTVETLAQQAELVL PHR+ VSAELIPVLC FLRS SGDTRALVVAI RVLLPPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAED VRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGTALLCSGRD AAVA ALLDRLS PL ALSP GG TRTGHEPPGDAAAVTTLDPALACLL+LLVDDGAGTTG
Sbjct: 1394 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGGG----GSGMETERWNIPVAAVAGVIGKCLLVVDDASXXXXXXXXXXXXXXXXXRLAGHQGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRCTAAAALYHVFGHDILGGEFCQDCDDXXXXXXXXXXXXXEIEASRSIGGESAGRXXXXXXXXRRSDRAGDDVPAAGRVASRVMREPGAPEFIVQGLSAEGSFTTSRRAFLGMFNLVVWASGNCGGDRAVGGGGTEDEEFAGQGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEDTVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRCPAA--AAAGMPELSPQQEYLYECSTLLAEWLCAIPERAARRLATELRQRRGVSAEGDGVSATTARDGCDAKRRWGRQSERSGGYRSGVGAPPRRFGPGQQAAAAGTAELEAAMGMFPAVVHLVNSPLLRERAVTRSFVSDVAGCLALSCPALGLAAAGTGRGNGXXXXSSGRSGRSSCRRAVSPAAGGPWSGDGXXXXXXXXXXXXXXXLAALLPTVETLAQQAELVLVPHRDVVSAELIPVLCLFLRSPSGDTRALVVAILRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGTALLCSGRDDPAAAAVAPALLDRLSGTPLPVALSPMGG-TRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTG 2209
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Match: D7FRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN8_ECTSI) HSP 1 Score: 1018 bits (2632), Expect = 0.000e+0 Identity = 647/808 (80.07%), Postives = 664/808 (82.18%), Query Frame = 1
Query: 1 MSALIATAGERPAGPGRGAQAAAALRRNAVAALGELLFYIVTQEPVGTGGGSRPAEGGGTETERWSIPVAAVAGVIGKCLPVADAGXXXXXXXXXXXXRLFGHEG--HYAAKTMENVLAQVGPSHALVPALVTSELALGLLDLARHASSENLRCTAAAALYHVLGHDILGGEFSQD--DXXXXXXLEVSSSIRSESAGRXXXXXXXXXXSDRAGDDVPAAGRVASRLMREPGAPEFIVQGLSAEGSSATSRRAFLGIFNLVVWASGSCGGGRAVGGGGPEDEGFDGGRRPNAPLILRRAVECMLDSQHLLLRLLRVAEHGEDAVLRAKGFLSLRLTLE-AADPDFLLKACRSRLLPLLARAIGGLAPRSAPRCPV--AGAAAAGMPELSPQQEYLYECSTLLAEWLCAVPETAARRLVTELRKRRGVSAGGNGTMATTTRDGCDATGRWGRQSERSGGYRSGGGVPRRRVGAKQQAAATGTTELEAAMAMFPAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPAPGVAAAGTGGXXXXXXXXXXXXXXXRAVSPAAGAPWSGGGSDDGSAGAVVLAALLPTVETLAQQAELVLAPHREAVSAELIPVLCRFLRSSSGDTRALVVAIFRVLLPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---AAEDRVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGTALLCSGRD-----AAVAAALLDRLSEAPLSAALSPGGGGTRTGHEPPGDAAAVTTLDPALACLLTLLVDDGAGTTG 2379
MSALIATAGE PAGPGR AQAAAALRRNAVAALGELLFYIVTQEPVGTGG G ETERW+IPVAAVAGVIGKCL V D XXXXXXXXXXX RL GHEG HYAAKTMENVLAQVGPSH LVPALVT ELALGLLDLARHASSENLR TA AALYHV GHDILGGEFSQD D XXX +E S I SESAGR SDRAGDDVPAAG VASR+MREPGAPEFIVQGLSAEGSSATSRRAFLG+FNLVVWASG+CGGGR+VGG GPED+ F GG R NAPL LRRAVECMLDSQHLLLRLLRVAEHGE AVLRAKGFLSLRL LE AADP FLLKACRSRLLPLLARAIGGLAPRSAPR P A A+AAG+PELSPQQEYLYECSTLLAEWLCAVPETAARRL TEL +RRGVSAGG+G ATT RDGCDATGRWGRQ +RSGG+RSGGG P RR GA+QQA+A GT ELEAAM MF AVVHLVNSPLLRERAVTRPFVSDVAGCLALSCP XXXXXXXXXXXXXXX SAG+VVLAALLPTVETLAQQAELVL PHR VSAELIPVLCRFLRS SGDTRALVVAIFRVLLPPL XXXXXXXXXXXXXXXXXXXXXX P AAED VRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLG ALLCSGRD A VAAALLDRLS PL AALSP GG TRTGHEPPGDAAAVTTLDPALACLL+LLVDDGAGTTG
Sbjct: 1 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGXXX-----GMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXX-RLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDILGGEFSQDRGDDDXXXEIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRRAFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVVLAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGMALLCSGRDDAAAAAPVAAALLDRLSGTPLPAALSPRGG-TRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTG 801
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Match: A0A7S2R5C0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 8.650e-15 Identity = 171/714 (23.95%), Postives = 251/714 (35.15%), Query Frame = 1
Query: 73 LRRNAVAALGELLFYIVT------QEPVGTGGGSRPAEGGGTETERWSIPVAAVAGVIGKCLPVADAGXXXXXXXXXXXXRLFGHEGHYAAKTMENVLAQVGPSHALVPALVTSELALGLLDLARHASSEN------------LRCTAAAALYHVLGHDILGGEFSQDDXXXXXXLEVSSSIRSESAGRXXXXXXXXXXSDRAGDDVPAAGRVASRLMREPGAPEFIVQGLSAEGSSATSRR---AFLGIFNLVVWASGSCGGGRAVGGGGPEDEGFDGGRRPNAPLILRRAVECMLDSQHLLLRLLRVAEHGEDAVLRAKGFLSLRLTLEAADPDFLLKACRSRLLPLLARAIGGLAPRSAPRCPVAGAAAAGMPELSPQQEYLYECSTLLAEWLCAVPETAARRLVTELRKRRGVSAGGNGTMATTTRDGCDATGRWGRQSERSGGYRSGGGVPRRRVGAKQQAAATGTTELEAAMAMFPAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPAPGVAAAGTGGXXXXXXXXXXXXXXXRAVSPAAGAPWSGGGSDDGSAGAVVLAALLPTVETLAQQAELVLAPHREAVSAELIPVLCRFLRSSSGDTRALVVAIFRVLLPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAEDRVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAW 2151
+RR A+A LGELLFYI + EP GG +RPA W++P A V+ V +CL + HYAAKT+EN+LAQ + T E+A+ LLD+A +S + LR TAA AL H+ L ++ A S G P ++ +R++ G PE I + + S + AFL + N V+W G G GR G ED G + + V S ++ L++ + + + K L+++L L P L+ L+ L R + A G+ E + YL + L +LC T L + + + A R+ R G P R + G A +A PA+VHLV S LL A+ + L+L A + T G + P G+ G GS S + LL V+ LA+ AE L+P + +++ L P +CR L +SGD R V + R LLP + + + LLP P L+ D DPIPQ+T+ LLLD+ AW
Sbjct: 242 IRRRAMATLGELLFYISSLEEGEEDEPSNGGGEARPAS-------TWTMPAATVSAVA-RCLLEGEDETVC----------------HYAAKTIENILAQAPGVYCR--RFATEEVAVRLLDIATRGASPSSTASARSGADGSLRTTAACALSHLF----------------RFLLVSPHTLPGPEAAAAALTDPEDSLSASLGTTGP---KLVARVLGR-GGPEPICRVIEGGVVGVVSEKMQLAFLNMLNCVLWEPGD-GYGRGSG----EDPILGLGADASPTTRALQPVREQFFSSRVVTSLVKSLDRQHSDLAKGKILLAIQL-LSLRHPQALVDVLERNLIHRLDRIV----------------AEQGLSE----RRYLRLSTLSLLGFLCRCVGTIPMALAQRIEQLAATQGNSPNSAAEAHRE------------------RDAGAAPAR-------PSLGGLFPDRAVLAAVPALVHLVQSRLLIRAALG--LAPSLLQDLSLCVTATVLPLNPTDGQAVLLDDTWVLLEEGKKRDP--GSRRRGSGSR--SIRPWLQTTLLLVVQGLARHAETELSPFSDKMASCLSPAVCRLLIDTSGDIRTQAVTLLRYLLPAVITTGVNQGNNHIT-------------------------------------ISTTILHDLLPRCPDLVADRDPIPQFTLALLLDLAEAW 815
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Match: A0A7S3CGV7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CGV7_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.360e-6 Identity = 49/134 (36.57%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 73 LRRNAVAALGELLFYIVTQEPVGTGGGSRPAEGGGTETERWSIPVAAVAGVIGKCLPVADAGXXXXXXXXXXXXRLFGHEGHYAAKTMENVLAQVGPSHALVPALVTSELALGLLDLARHASSENLRCTAAAAL 474
+RR ++AALGELLFYIVTQE + AE GG W IP + ++ V D HYA KT+EN+ + +G + AL L T E AL L+ + HA SE+++ TA++AL
Sbjct: 212 VRRKSMAALGELLFYIVTQE--------QEAEEGGMGRPSWYIPNGTITTIVRLLRNVEDPVTQ-----------------HYAVKTLENIFS-IGGAWAL--RLGTHETALSLVHICTHAKSEHVKVTASSAL 317
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Match: A0A0G4IQG6_PLABS (Protein kinase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IQG6_PLABS) HSP 1 Score: 61.2 bits (147), Expect = 8.170e-6 Identity = 52/144 (36.11%), Postives = 69/144 (47.92%), Query Frame = 1
Query: 67 AALRRNAVAALGELLFYIVTQEPVGT----GGGSRPAEGGGTETERWSIPVAAVAGVIGKCLPVADAGXXXXXXXXXXXXRLFGHEGHYAAKTMENVLAQVGPSHALVPALVTSELALGLLDLARHASSENLRCTAAAALYHVL 486
A +RR+AVA LGELLFY+ TQEP G S E W+IP A+ VI + L + HYAAKT+ENV AQ P A + T E+ L L+ + + + + LR T+AAAL +L
Sbjct: 548 AKIRRHAVATLGELLFYVATQEPNAQVNAPGAPSSDVAPRRDENNNWAIPACAIGTVI-RGLRAGEDNVVR----------------HYAAKTIENVAAQ-SPGSA-IEWFATPEIVLALVQIFQSTTHKALRVTSAAALSQLL 672 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14592.3307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14592.3307.1 >prot_E-fasciculatus_F_contig14592.3307.1 ID=prot_E-fasciculatus_F_contig14592.3307.1|Name=mRNA_E-fasciculatus_F_contig14592.3307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=793bp MSALIATAGERPAGPGRGAQAAAALRRNAVAALGELLFYIVTQEPVGTGGback to top mRNA from alignment at E-fasciculatus_F_contig14592:1..2749- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14592.3307.1 ID=mRNA_E-fasciculatus_F_contig14592.3307.1|Name=mRNA_E-fasciculatus_F_contig14592.3307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2749bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14592:1..2749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14592:1..2749- >mRNA_E-fasciculatus_F_contig14592.3307.1 ID=mRNA_E-fasciculatus_F_contig14592.3307.1|Name=mRNA_E-fasciculatus_F_contig14592.3307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4758bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14592:1..2749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |