mRNA_E-fasciculatus_F_contig14581.3303.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: D8LFC6_ECTSI (Homologue of the meiosis-specific protein HOP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC6_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.800e-45 Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 1
Query: 31 QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAY+LTMWLESGVFKAVE+R
Sbjct: 46 QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHR 129
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A196S9B0_BLAHN (HOP1, HORMA domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9B0_BLAHN) HSP 1 Score: 81.3 bits (199), Expect = 2.940e-16 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 34 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
V++ QSL +VKN++R SIS +C+LR +F CF ++ YAG+ I L T + D+ + +QEA+ LT WLE GVF A+E R
Sbjct: 10 VSQQQSLAVVKNMVRTSISEICYLRNLFNEDCFSQKNYAGIMINALHPVTNGKEGDQPQIHNQEAWQLTRWLEEGVFDALEKR 92
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: W4FWS5_9STRA (HORMA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWS5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.500e-15 Identity = 41/84 (48.81%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 31 QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
++TETQSL ++KNLIRVSIS +C+LR +FP + F+ER YA M+I L A ++ D+++ Q+AY++T WLE+G F A+E +
Sbjct: 33 KITETQSLNVIKNLIRVSISEICYLRNLFPDEVFKERVYADMQIKCL--APQENSRDQSM---QDAYSITEWLEAGAFDAMEKK 111
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A6G0XR20_9STRA (HORMA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR20_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.030e-13 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 1
Query: 16 TACRKQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
T ++TETQS++++KN+IRVS+S +C+LR +FP + F+ER YA M I L D V++D AY +T WLE+G+F+A++ +
Sbjct: 27 TPASTKITETQSISVIKNMIRVSVSEICYLRNLFPEEVFKERVYADMHIKCLAPVEGSRDP---VMRD--AYCVTQWLEAGMFEAMDKK 110
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A482SLB7_9ARCH (HORMA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLB7_9ARCH) HSP 1 Score: 69.7 bits (169), Expect = 6.950e-13 Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 73 IRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVE 276
+R+SIS++C R IFP+ C++ + Y ++I+QL A +D + E VVK ++A+ LT WLE GVF A+E
Sbjct: 1 MRISISSICFFRDIFPSDCYKNKQYGNVQIHQLQGAQKDEE-GEVVVKHKDAFLLTQWLEKGVFSALE 67
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: D8M718_BLAHO (HORMA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M718_BLAHO) HSP 1 Score: 71.2 bits (173), Expect = 1.430e-12 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 34 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAA-TRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
VT+ QSL +VKN+IR SIS +C+LR +F CF ++ YAG+ I L T++ E + + EA+ LT WLE GVF A+E R
Sbjct: 10 VTQQQSLAVVKNMIRTSISEICYLRNLFDEDCFCKKNYAGIMINALHPMDTKEG--SEPHIHNSEAWQLTRWLEEGVFDALEKR 91
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A485K5J0_9STRA (Aste57867_1544 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5J0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.480e-12 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 16 TACRKQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAV 273
T ++T QSL ++KN+IRVSIS +C+LR IFP + F+ER YA M+I L A + D ++V +A+ +T WLE+G+F A+
Sbjct: 22 TPASTKITSEQSLNVIKNMIRVSISEICYLRNIFPEEVFRERVYADMRIKCL--APDEVSRDPSMV---DAFAITQWLEAGIFDAM 102
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A8K1FAY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAY3_PYTOL) HSP 1 Score: 65.9 bits (159), Expect = 1.880e-10 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 28 KQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQE-AYNLTMWLESGVFKAVENR 282
K +T QS+ +++N+IRVS+S +C+LR +FP F+ER YA M I L A E KD E A +T WLE GVF+A+E +
Sbjct: 15 KGLTHIQSMNVIRNMIRVSVSEICYLRNLFPDDMFKERIYADMHIKCL------APQKEKTSKDAEDALLVTRWLEDGVFEALEKK 94
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: UPI001D04C4D8 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D04C4D8) HSP 1 Score: 65.5 bits (158), Expect = 2.590e-10 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 28 KQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
+ VT +SLTL++NL+R +IS+VC+LR IFP CFQ+++ +G+ I L A +A T L WLE GVF+A++ +
Sbjct: 11 QSVTYEESLTLMRNLMRTAISSVCYLRNIFPEDCFQDKSLSGINIKSLQPANDEART------------LIDWLEKGVFEALKKK 83
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Match: A0A6A5BFC5_NAEFO (HORMA domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BFC5_NAEFO) HSP 1 Score: 65.1 bits (157), Expect = 3.690e-10 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 28 KQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYNLTMWLESGVFKAVENR 282
+ VT +SLTL++NL+R +IS+VC+LR IFP CFQ+++ +G+ I L A +A T L WLE GVF+A++ +
Sbjct: 653 QSVTFEESLTLMRNLMRTAISSVCYLRNIFPEDCFQDKSLSGINIKSLQPANDEART------------LIDWLEKGVFEALKKK 725 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14581.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14581.3303.1 >prot_E-fasciculatus_F_contig14581.3303.1 ID=prot_E-fasciculatus_F_contig14581.3303.1|Name=mRNA_E-fasciculatus_F_contig14581.3303.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=98bp MVVLATACRKQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAback to top mRNA from alignment at E-fasciculatus_F_contig14581:690..1318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14581.3303.1 ID=mRNA_E-fasciculatus_F_contig14581.3303.1|Name=mRNA_E-fasciculatus_F_contig14581.3303.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=629bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14581:690..1318- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14581:690..1318- >mRNA_E-fasciculatus_F_contig14581.3303.1 ID=mRNA_E-fasciculatus_F_contig14581.3303.1|Name=mRNA_E-fasciculatus_F_contig14581.3303.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=588bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14581:690..1318- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |