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Homology
BLAST of mRNA_E-fasciculatus_F_contig10013.33.1 vs. uniprot
Match: D8LJY4_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY4_ECTSI) HSP 1 Score: 726 bits (1873), Expect = 4.110e-259 Identity = 445/539 (82.56%), Postives = 453/539 (84.04%), Query Frame = 1
Query: 1 MPPTPHRTRVRPSPS--KSPRRRGLAAEFDDSDNDEAAFRARYHVSVRSAKNLKRAGFRGLTNPYCQLNVGRQGPYTTDVVCDSVNPSWENNRQTFEFREGKGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETD-VNGGGNSPYPPMSPSATTTT--SLASSFVKAALSLPQKPRASGGADGAAAAAAVQAELLALSPRTATRGTEKK-AVSATKSPSLAALARASSLPFTEKAXXXXCSSSSAGVDKGGGXXESGRYGSAAAAVAQEYLLPLSPRMARGAXXXXXXXXXXGE-----RGYTKGGGAGGWSWKSFFCGVVCSVLLVFGVLWAVGVP----QLGFGLRVLEDGGDGRQAVVLIHGSKISGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXX-GGREQHVGDGGGEGDCGRWCSFS------RRLAAPLYAARRDGXXXXXXXGLGTDL 1551
MPPTPHRTRVRPSPS KSPRRRGLAAEF DSDNDEA+ ARYHVSVRSAKNLKR GFRGLTNPYCQLNVGRQGPYTTDVV DSVNPSWENNRQTFEFRE KGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETD VN GGN+PYPPMSPS SLASSFVKAALSLP KPR SGGA AAAAAVQAELLALSPRTATRGTEKK A+SATKSP ALAR SSLP TEKA XXX XX S RYGSAAA VAQE LLPLSPRMARGA XXXXXXX RGY+KGG AGGWSWKSFFCGVV S LLV G LWAVGVP QLGFGLRVLEDG +GRQAVVLIHGSKI+GLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXX GGRE+H GD GGE DCGRWCSF RRLAAPLYAARR+ LGTDL
Sbjct: 1 MPPTPHRTRVRPSPSTSKSPRRRGLAAEFVDSDNDEASCCARYHVSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWENNRQTFEFREAKGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETDDVNRGGNNPYPPMSPSXXXXXXXSLASSFVKAALSLPHKPRTSGGAGDGAAAAAVQAELLALSPRTATRGTEKKKAMSATKSP---ALARVSSLPGTEKAAXXXXXXXXXXXXX---XXXSDRYGSAAA-VAQEDLLPLSPRMARGAEAAXXXXXXXXXXXARGRGYSKGGSAGGWSWKSFFCGVVFSALLVLGGLWAVGVPLLSGQLGFGLRVLEDGENGRQAVVLIHGSKIAGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXXXGGREEHTGDNGGESDCGRWCSFCXXXXXXRRLAAPLYAARRE----VGGGALGTDL 528
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | C2 domain |
| Ec32 ortholog | Ec-06_007450.1 |
| Exons | 6 |
| Model size | 1554 |
| Cds size | 1554 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10013.33.1 >prot_E-fasciculatus_F_contig10013.33.1 ID=prot_E-fasciculatus_F_contig10013.33.1|Name=mRNA_E-fasciculatus_F_contig10013.33.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=518bp
MPPTPHRTRVRPSPSKSPRRRGLAAEFDDSDNDEAAFRARYHVSVRSAKN
LKRAGFRGLTNPYCQLNVGRQGPYTTDVVCDSVNPSWENNRQTFEFREGK
GPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQV
WAGSVEIELHYIPEGEAGSPARGGRVGRPALDETDVNGGGNSPYPPMSPS
ATTTTSLASSFVKAALSLPQKPRASGGADGAAAAAAVQAELLALSPRTAT
RGTEKKAVSATKSPSLAALARASSLPFTEKAAASSCSSSSAGVDKGGGGG
ESGRYGSAAAAVAQEYLLPLSPRMARGAEAAVAAAAAAGERGYTKGGGAG
GWSWKSFFCGVVCSVLLVFGVLWAVGVPQLGFGLRVLEDGGDGRQAVVLI
HGSKISGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAA
AAAGDGGDGGKGRNGRGGGREQHVGDGGGEGDCGRWCSFSRRLAAPLYAA
RRDGGGGGGGGGLGTDL* back to topmRNA from alignment at E-fasciculatus_F_contig10013:215..4435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10013.33.1 ID=mRNA_E-fasciculatus_F_contig10013.33.1|Name=mRNA_E-fasciculatus_F_contig10013.33.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4221bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10013:215..4435+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCTCCGACGCCTCACCGGACCCGGGTCCGGCCCAGCCCGAGCAAGTC
TCCGCGGCGCAGGGGGCTCGCCGCCGAGTTCGACGACTCGGACAACGATG
AGGCAGCCTTTCGCGCTCGGTATCACGTCTCGGTCCGCAGTGCAAAGGTG
AACGAACACACGCTGCTGGTGCTGCTGGCCTGTAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGAAGTTGGGGGGTAGTGGAAGCAGGGAGTC
GGGTGAGGTAGTATCCTTTTGGTCGGGGGGGGGAGGGGGGTGAGAGGAAT
CCAGCAGAAGAGTGAAGACACCCAAGTGTAGCGAGATCCATTTTCGCTGG
CCGACATGTAGTCTATTGTAGTGTAGTCTACGCGAAGACTACCTCATCGC
GATGGAGTTGTTGTTGTCCAGAGTCCAGAGCCTTTAGGGTGGGTGCAGAA
TGCAGAGGGAAACACGAACCCAACACACGGCGGTCGCACAGATCTTGTTT
GCCTCTTACACGCCTTCTCGTGCGTCGCATCTGTCGTGTGTGGTCTCTCT
GTCTGTCGGTGTGTGTGTCGCTCTCTCTCTCTCTCCCTCAGAACCTGAAG
CGAGCGGGCTTCCGCGGGCTGACGAACCCGTACTGCCAGCTGAACGTCGG
GAGGCAAGGCCCTTACACCACCGACGTCGTCTGCGACTCCGTCAACCCTT
CGTGGGAGAACAACCGCCAGACTTTCGAGTTCAGGGTGAGTGTTGGTGGC
GTGTGGAGACACTGCTGTAGATGATGGCTGATGGGGGAAACACTCGCGGA
GCTTGAGAGTCAACAACGCTGACCAGGTGTGCGTCATGTCATGTGTGTGC
AGGGTCACCCCCGACCACCGGCGCCGCTAGACTAAGAGAAAGCAAGAATC
GCTGTCCTAATGCAGGTACCTGGCTTGCCGCCGGGGGTGTTTTGGTTGCT
TGATGGGAACCCGGAGCTGCTTTACTGAAAGGAATACTCCTCCTTTCGTG
ACGGCACGAAACGGAGCGGGACAAGAGAAGATACCGGCGTGTTTGCCATT
TGCCAACCGGAAACGCTCCGCAACTACAGCAGTACTGCTGTATGTAAAGA
TTTAGATTCTCCTCTTGATGAGAGTCGCGTGGGGAGGGAATCATGTGTTC
TACCTACCGCTTCCTGAACTGACGGATGCTGCTATAGCACCTACAGCAGT
GTATCACCGCGCGCCTACAGGGTGGCCAGCCACTACATGCTGATGCTAAC
GTCTACCCCCTTGCCCCACGGAACGCCTCTGAACTCGGCGCGCTTACTGC
CACGGCGGTGACTATCGTCCCCCCCCCCCGAAAAGGAGGGGAAGGGCCCG
CAGGAAGACAAGCTGACGCTGGCATGCTTCAATTCTGGGGACGTGCCCGA
GCTGATCGGGCGGCTGAGTGTGGCCCTGTCGCACGCCACGCACAAGGTCA
TCAGCCTTCCCATGTTCCGCAAGGACCTCGGGGTGAGTCACTTGGTGTCC
AGCTGTTTGGTGTTCCTCTGCTCTTGTGTTTATCTACTGGCTCAGACTGG
CCGGGGGGTTAGGCCGTCTTCTTGTGCTACTCAACTTGACTTGCGTTTGC
TCTACGTTATCGGCTGAGTCTGTTGGGGATGTCAGTCAACTACAACAAGT
GCGGTCGCGCTTCGGGCCCACGTCAAGACGTGTTTGTTTGCTGCCTTCCT
CTTGTGTTTGTGTGTTTTTCTTTTCTTTTCTTTTCAGGCCAAGCGGAGCA
CGTGGTTACTATGCTTGTCTTTGTCTCCGCAACCTGAGCATATCGAAGCC
ACCAAGTGGCTTAGCTGAAGAGATTCAAAACACCCCCGTTCCCCGAGGTC
GCCGGCCAGAACGAAAACTGGGCCAACACGGCGTCCTACTGCCCCGTCGT
CGTTGCCCAACGAAATTTCCTTCCCGTAGATATGCACACTTTCCTGGCTT
GGCCTGCCCCCCGCCCTTGTTCCTTCCCTCGCCGCCGCTCCATCTCGATC
ATCATACAAAACGACGCACGAACGCCACGCCATGCCATATCGTTACCTAC
CGCGCCAGGGGTCCCAAGTCTGGGCGGGTAGCGTCGAGATCGAGCTCCAC
TACATCCCGGAAGGCGAGGCGGGGTCCCCGGCTCGCGGCGGACGGGTAGG
CAGGCCCGCCCTCGACGAGACCGATGTCAACGGCGGCGGCAACAGCCCCT
ACCCGCCCATGTCCCCGTCCGCGACGACGACGACGTCCCTCGCCTCTTCC
TTCGTCAAGGCGGCCTTGTCCTTGCCGCAGAAGCCGCGGGCCTCCGGCGG
CGCCGACGGCGCGGCGGCAGCGGCGGCGGTGCAGGCGGAGCTGCTGGCCC
TCTCTCCGCGGACGGCGACGAGGGGAACGGAGAAGAAGGCGGTGTCGGCG
ACGAAGTCGCCGTCGTTGGCGGCGTTGGCGAGAGCGAGCTCTCTGCCCTT
CACGGAGAAGGCGGCAGCCTCCTCTTGTTCCTCCTCCTCCGCAGGAGTCG
ACAAGGGCGGCGGCGGCGGCGAAAGCGGCCGCTACGGCTCCGCCGCGGCA
GCGGTGGCCCAGGAGTACCTGCTCCCCCTGTCGCCGAGGATGGCGAGGGG
GGCCGAGGCGGCGGTGGCCGCGGCAGCGGCCGCCGGGGAGCGGGGTTACA
CTAAGGGCGGCGGCGCGGGGGGGTGGAGCTGGAAGTCGTTCTTCTGCGGG
GTTGTGTGCTCGGTGCTGCTCGTGTTTGGGGTGCTGTGGGCCGTCGGCGT
TCCGCAGCTTGGGTTCGGCCTGAGGGTCCTGGAGGACGGCGGGGACGGTC
GGCAAGCGGTTGTTCTCATCCACGGCTCGGTAAGCGCGGGGGGGTGGTTG
CTGGCCGTGTGGTGGGTTTGATCGTTGACGAGGCGTTCCATTTCGGGGAT
GATGTCCGTTCTCGTTCTCTGGAGAGAGACCAGGCTAGCCTTGTCTTCAT
GACTGTTCAAAGAGTTATTTGCTAGAAGAAAGGAGGCGGTTATCTTTCTT
GAGCGTGGGTGGTCGCAGTAGAAAGAGACCCGGCGAGCACCACAGCCCTC
CTCTTTTCCTTCCCCAGCCGCCCCCTCTCTTATCTGCTGGTTGTCGCAGT
TTCTTGCGCCGACCGCGAACGCCTCTTTAGCCTAGCCACAAACCCCGAAA
ACCGCCCTAAACCTGCTGCCTTACGGCGTTCCTCTGTACGGCACCTCTGC
CCATTTTACACCTCACCCGGGCGCGGCGTAACCAACTTGTACCAACCGAA
CAGCTCGCCGTCTAATCTCCCAATGCATGCGCGTGTGCAAATCCGCGTGT
GTTTGTGCATGGTGATTTTCTTTTTGGGACAGAAAATATCCGGGCTGGCT
GACCGGCACCTGGTGGTGTTCGTGGGCGAGCAAGAGGTATGCCGTGGGGG
CGTGCCAGCCCCGGCACCCCCGACGGAGGGGTCGTCGTGGGCGTACGACC
TTTGGTCTTCGGATTCCGCCGCCGCGGCCGCCGGTGACGGGGGAGATGGT
GGCAAGGGTCGGAATGGTCGGGGTGGAGGACGTGAGGTGAGGGGTTGGTT
CTTCGGTATCAGCGTGTATCTGTGCTGCTGTACCAGCTGCACGCAACGGC
GATCTGTTTGATGCTCTCTGTGCGTGGGGCCACTCCTTGCCAGAGTGTCT
CTCTTTGACTCTGTGTGCAGTCCGTCGGTATGCACCATGCACCATGCATC
GACGCCGCACGTCTCGGTCTGACTCGCATTCCAGCTTATTTTCAATATTG
TGTAGGGCACCTGACTAGTTGGCGAGATCCCCAAAGGTAGGATCGAGCTA
AACCTTGCTACCCCGAACGAATAACGGCGAAGAAAAATGCTGTCCCTTTG
TGTCCGTTACAGCCCACCTCAGGTGATGCACCCCCCCGCTCCGCTTACGC
ATTTGTACGTTCCATGCATTGGGTTGCTGCGCATCTCTCTGGACACGCAT
ACTTTCGCTGATTTTGCCCGCCTTCGTGTGCAAACTTCAAACTTCCCCAT
CTCTAAAACGTGTATTCCCCGTTGCCCCCTCCCCCGACCTCAACATACGC
GCACACACGGCTCTTCGTTTCCACTAACAGCAGCATGTGGGCGACGGCGG
TGGAGAAGGTGATTGCGGCCGCTGGTGTTCTTTCAGCCGCCGGCTTGCCG
CGCCCCTCTACGCCGCTCGGCGAGATGGTGGCGGCGGCGGTGGCGGCGGC
GGACTCGGCACCGACCTCTGA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10013:215..4435+ >mRNA_E-fasciculatus_F_contig10013.33.1 ID=mRNA_E-fasciculatus_F_contig10013.33.1|Name=mRNA_E-fasciculatus_F_contig10013.33.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3108bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10013:215..4435+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCTCCGACGCCTCACCGGACCCGGGTCCGGCCCAGCCCGAGCAAGTC
TCCGCGGCGCAGGGGGCTCGCCGCCGAGTTCGACGACTCGGACAACGATG
AGGCAGCCTTTCGCGCTCGGTATCACGTCTCGGTCCGCAGTGCAAAGATG
CCTCCGACGCCTCACCGGACCCGGGTCCGGCCCAGCCCGAGCAAGTCTCC
GCGGCGCAGGGGGCTCGCCGCCGAGTTCGACGACTCGGACAACGATGAGG
CAGCCTTTCGCGCTCGGTATCACGTCTCGGTCCGCAGTGCAAAGAACCTG
AAGCGAGCGGGCTTCCGCGGGCTGACGAACCCGTACTGCCAGCTGAACGT
CGGGAGGCAAGGCCCTTACACCACCGACGTCGTCTGCGACTCCGTCAACC
CTTCGTGGGAGAACAACCGCCAGACTTTCGAGTTCAGGAACCTGAAGCGA
GCGGGCTTCCGCGGGCTGACGAACCCGTACTGCCAGCTGAACGTCGGGAG
GCAAGGCCCTTACACCACCGACGTCGTCTGCGACTCCGTCAACCCTTCGT
GGGAGAACAACCGCCAGACTTTCGAGTTCAGGGAGGGGAAGGGCCCGCAG
GAAGACAAGCTGACGCTGGCATGCTTCAATTCTGGGGACGTGCCCGAGCT
GATCGGGCGGCTGAGTGTGGCCCTGTCGCACGCCACGCACAAGGTCATCA
GCCTTCCCATGTTCCGCAAGGACCTCGGGGAGGGGAAGGGCCCGCAGGAA
GACAAGCTGACGCTGGCATGCTTCAATTCTGGGGACGTGCCCGAGCTGAT
CGGGCGGCTGAGTGTGGCCCTGTCGCACGCCACGCACAAGGTCATCAGCC
TTCCCATGTTCCGCAAGGACCTCGGGGGGTCCCAAGTCTGGGCGGGTAGC
GTCGAGATCGAGCTCCACTACATCCCGGAAGGCGAGGCGGGGTCCCCGGC
TCGCGGCGGACGGGTAGGCAGGCCCGCCCTCGACGAGACCGATGTCAACG
GCGGCGGCAACAGCCCCTACCCGCCCATGTCCCCGTCCGCGACGACGACG
ACGTCCCTCGCCTCTTCCTTCGTCAAGGCGGCCTTGTCCTTGCCGCAGAA
GCCGCGGGCCTCCGGCGGCGCCGACGGCGCGGCGGCAGCGGCGGCGGTGC
AGGCGGAGCTGCTGGCCCTCTCTCCGCGGACGGCGACGAGGGGAACGGAG
AAGAAGGCGGTGTCGGCGACGAAGTCGCCGTCGTTGGCGGCGTTGGCGAG
AGCGAGCTCTCTGCCCTTCACGGAGAAGGCGGCAGCCTCCTCTTGTTCCT
CCTCCTCCGCAGGAGTCGACAAGGGCGGCGGCGGCGGCGAAAGCGGCCGC
TACGGCTCCGCCGCGGCAGCGGTGGCCCAGGAGTACCTGCTCCCCCTGTC
GCCGAGGATGGCGAGGGGGGCCGAGGCGGCGGTGGCCGCGGCAGCGGCCG
CCGGGGAGCGGGGTTACACTAAGGGCGGCGGCGCGGGGGGGTGGAGCTGG
AAGTCGTTCTTCTGCGGGGTTGTGTGCTCGGTGCTGCTCGTGTTTGGGGT
GCTGTGGGCCGTCGGCGTTCCGCAGCTTGGGTTCGGCCTGAGGGTCCTGG
AGGACGGCGGGGACGGTCGGCAAGCGGTTGTTCTCATCCACGGCTCGGGG
TCCCAAGTCTGGGCGGGTAGCGTCGAGATCGAGCTCCACTACATCCCGGA
AGGCGAGGCGGGGTCCCCGGCTCGCGGCGGACGGGTAGGCAGGCCCGCCC
TCGACGAGACCGATGTCAACGGCGGCGGCAACAGCCCCTACCCGCCCATG
TCCCCGTCCGCGACGACGACGACGTCCCTCGCCTCTTCCTTCGTCAAGGC
GGCCTTGTCCTTGCCGCAGAAGCCGCGGGCCTCCGGCGGCGCCGACGGCG
CGGCGGCAGCGGCGGCGGTGCAGGCGGAGCTGCTGGCCCTCTCTCCGCGG
ACGGCGACGAGGGGAACGGAGAAGAAGGCGGTGTCGGCGACGAAGTCGCC
GTCGTTGGCGGCGTTGGCGAGAGCGAGCTCTCTGCCCTTCACGGAGAAGG
CGGCAGCCTCCTCTTGTTCCTCCTCCTCCGCAGGAGTCGACAAGGGCGGC
GGCGGCGGCGAAAGCGGCCGCTACGGCTCCGCCGCGGCAGCGGTGGCCCA
GGAGTACCTGCTCCCCCTGTCGCCGAGGATGGCGAGGGGGGCCGAGGCGG
CGGTGGCCGCGGCAGCGGCCGCCGGGGAGCGGGGTTACACTAAGGGCGGC
GGCGCGGGGGGGTGGAGCTGGAAGTCGTTCTTCTGCGGGGTTGTGTGCTC
GGTGCTGCTCGTGTTTGGGGTGCTGTGGGCCGTCGGCGTTCCGCAGCTTG
GGTTCGGCCTGAGGGTCCTGGAGGACGGCGGGGACGGTCGGCAAGCGGTT
GTTCTCATCCACGGCTCGAAAATATCCGGGCTGGCTGACCGGCACCTGGT
GGTGTTCGTGGGCGAGCAAGAGGTATGCCGTGGGGGCGTGCCAGCCCCGG
CACCCCCGACGGAGGGGTCGTCGTGGGCGTACGACCTTTGGTCTTCGGAT
TCCGCCGCCGCGGCCGCCGGTGACGGGGGAGATGGTGGCAAGGGTCGGAA
TGGTCGGGGTGGAGGACGTGAGAAAATATCCGGGCTGGCTGACCGGCACC
TGGTGGTGTTCGTGGGCGAGCAAGAGGTATGCCGTGGGGGCGTGCCAGCC
CCGGCACCCCCGACGGAGGGGTCGTCGTGGGCGTACGACCTTTGGTCTTC
GGATTCCGCCGCCGCGGCCGCCGGTGACGGGGGAGATGGTGGCAAGGGTC
GGAATGGTCGGGGTGGAGGACGTGAGCAGCATGTGGGCGACGGCGGTGGA
GAAGGTGATTGCGGCCGCTGGTGTTCTTTCAGCCGCCGGCTTGCCGCGCC
CCTCTACGCCGCTCGGCGAGATGGTGGCGGCGGCGGTGGCGGCGGCGGAC
TCGGCACCGACCTCTGACAGCATGTGGGCGACGGCGGTGGAGAAGGTGAT
TGCGGCCGCTGGTGTTCTTTCAGCCGCCGGCTTGCCGCGCCCCTCTACGC
CGCTCGGCGAGATGGTGGCGGCGGCGGTGGCGGCGGCGGACTCGGCACCG
ACCTCTGA back to top
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