prot_E-fasciculatus_F_contig14576.3297.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14576.3297.1
Unique Nameprot_E-fasciculatus_F_contig14576.3297.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length331
Homology
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 1.720e-149
Identity = 306/319 (95.92%), Postives = 308/319 (96.55%), Query Frame = 0
Query:   13 MAVAKQQKHAPTPASAAAVGATAAAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPIAGQAFHPVLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            MAVAKQQKHAP PASA+ VGAT AAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DPIAGQAFHPVLSYAYLDAADP+EQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXX  GLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK
Sbjct:    1 MAVAKQQKHAPAPASASTVGATTAAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXX--GLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 314          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK)

HSP 1 Score: 133 bits (335), Expect = 8.640e-33
Identity = 65/179 (36.31%), Postives = 103/179 (57.54%), Query Frame = 0
Query:  151 PVLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFC 329
            PVL Y+++DA D +    ERD++P R+S WS   + FE LL      E+L +  + + +DLS+PW++M ++EKW   +E+ +  +  QLSVG QD+L     + +  + +                            ++RNLGVP++V+GCK D++++ETFE QQ+L FIQQ LR+FC
Sbjct:   79 PVLFYSFMDAVDLTANEFERDDTPARISTWSLGDVSFENLLSIPFTAEKLKHTMIAITLDLSKPWDLMRNLEKWVKVLERAIVKVRSQLSVGDQDELMQIQNDYIASQTEVENSSK----------------------IQRNLGVPLMVIGCKLDAIEAETFEHQQKLQFIQQHLRKFC 235          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A7M7RH67_STRPU (Dynein light intermediate chain n=6 Tax=Echinacea TaxID=7674 RepID=A0A7M7RH67_STRPU)

HSP 1 Score: 91.7 bits (226), Expect = 7.470e-17
Identity = 66/198 (33.33%), Postives = 93/198 (46.97%), Query Frame = 0
Query:  153 LSYAYLDAADPSEQGAERDESPPRVSVWSCSGL-EFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLL----------------QLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCL 330
            L Y YLD  D      +RD++  R  VW  +G  E E LL   L  + L +M V++AVD+ RPW +MDS++KWT  + +HV SL +                Q     +    S+V  R  G  K  G                    LG+  L  NLGVP+VVV  K+D   +L+ E     + L F+QQ++R+FCL
Sbjct:   84 LEYLYLDVRD-----EDRDDT-TRCGVWILAGENEHEDLLRYALTADNLEHMLVIIAVDMCRPWNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQDSSVTRRTSGVTKPTGAEDEEAVVLP----------LGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDEHLDFLQQNVRKFCL 265          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A8D9DQ38_9HEMI (Dynein light intermediate chain n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9DQ38_9HEMI)

HSP 1 Score: 85.1 bits (209), Expect = 1.370e-14
Identity = 58/193 (30.05%), Postives = 96/193 (49.74%), Query Frame = 0
Query:  152 VLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEP----LLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLR-----GKAKEIGGXXXXXXXXXXXXXXXXXG-GLGDGVLERNLGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCLK 331
             L YAY++ +D      E  E   R+ VW   G   EP    LL+  L  + LP+  V+  V ++ PW ++D ++KW +A++ H+ +L    ++GA D      +   R      +  ++ G                 G  LG+G+LERNLGV +VVV  K D   +L+ + + +++   F+QQ +R+FCLK
Sbjct:   79 ALEYAYINVSD------EYREDHTRLGVWILDG---EPAHSNLLQFALNQDTLPHTMVMFVVSMTTPWNIIDELQKWASALQDHIDNL----NIGAHDYQELTQRNIKRWYEYVDQGDDLDGDNSLPNRRISRNYEEEQGLPLGEGILERNLGVDIVVVVTKTDYMSTLEKDLYYKEEHFDFVQQYIRKFCLK 258          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: F0VZ01_9STRA (Dynein light intermediate chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ01_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.430e-14
Identity = 73/295 (24.75%), Postives = 122/295 (41.36%), Query Frame = 0
Query:   38 ATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPIAGQAFHPVLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKE-IGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            A AN W+ MLRD+  RS++PS   + VG  G GK SLL   +     A+ +N                                                    +P+  Q    +  +A +  +D      E DES   ++ WS + L+   LL+  L+   L      V VDLS PW +  S+EKWT+A+E  +   + Q+    +  L  ++K  L    +  +GG                   L +G+L++NLG+P V++  K+D L+ E+  Q   + +++ S+R F ++
Sbjct:    4 ANANQWQQMLRDSSVRSKIPSVNFIIVGDPGTGKESLLAR-MSASNRANLSNSENWNPTKQNELLSSYSDNQA------------------------------SNPL--QKSDALFKFAAIPISD-KHVAVEADESIAMINAWSLNDLDLHELLQIALQSSTLEFSVAAVTVDLSSPWSMQKSIEKWTSALEGAILQQMSQIDPQKRSSLYQSIKNHLLDYGEPGMGGQPSDTRGPMDSSSRNEF--LEEGILDKNLGIPFVIIVTKSD-LRPESSLQ---VDYLEYSIRMFAIR 258          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A6A4FS02_9STRA (Dynein light intermediate chain n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FS02_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.780e-14
Identity = 51/185 (27.57%), Postives = 96/185 (51.89%), Query Frame = 0
Query:  147 QAFHPVLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            +A   +L++  LD  DP  +  E ++    +  WS + L  + L++  ++P+ L    V + +DLSRPW +  S+E+W +A+E  +   + QL+  A+++L +A+K+ +   A E                      + +GVL +NLGVP+V+V  KAD       E   ++ +I+ +LR+F ++
Sbjct:   58 RAVDTLLAFKTLDVLDP--RAKESEDVMAHIGTWSLNDLNLKDLIKIAVKPQTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLTPEARNELYTAIKQHIL--AYEDPSVDHSEPTPMDTSTNEF---MEEGVLSKNLGVPLVIVVAKADL----RLENSVKMDYIEYTLRQFAIR 231          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A0D2VPW6_CAPO3 (Dynein light intermediate chain n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VPW6_CAPO3)

HSP 1 Score: 83.6 bits (205), Expect = 3.740e-14
Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 0
Query:  153 LSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEP-LLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLR-------GKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCLK 331
            L YAY +  D      + ++   ++ VWS  G   +P  L + L       M  V+AVDLS+PW +++S++++T A+E+H+ +L     VG +D L     + +R       GKA   G                    L   VL RNLG+P+VVV CK+D   +L+ +   + +   FIQ  LR+FCL+
Sbjct:   88 LEYAYAEVKD-----EDNEDFSAQIGVWSLDGDLLQPSTLASALNENNFAGMLAVLAVDLSQPWSILESLKQYTRALEEHIETL-----VGIEDQLPELKAKLVRAFQTYSEGKAVADGSEAVLAP-------------LEHDVLSRNLGLPIVVVACKSDLLSTLERDYNYKDEHYDFIQHHLRKFCLR 254          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A421FAE9_9STRA (Dynein light intermediate chain n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAE9_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.640e-14
Identity = 49/183 (26.78%), Postives = 92/183 (50.27%), Query Frame = 0
Query:  152 VLSYAYLDAADP--SEQGAERDESP-PRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            +L+Y  +D  DP   E G +  E     +  WS + L  + L++  ++P+ L    V + +D+SRPW +  S+E+W +A+E  +   + QLS  A+++L +A+K+ +                            + +GVL +NLGVP+V+V  KAD     +     ++ +I+ +LR+F ++
Sbjct:   67 LLAYTTVDVLDPRAKESGGDASEDVMAHIGTWSLNDLSLKDLIKIAVKPQNLQKTVVAIVLDMSRPWTIKSSLEQWLSALEGQLLEQINQLSPEARNELYAAIKQHILTYEDPSVDHSAPTPMDTSTNEF-----MEEGVLSKNLGVPLVIVVAKADLRPENSV----KMDYIEYTLRQFAIR 240          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: M4BRF2_HYAAE (Dynein light intermediate chain n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRF2_HYAAE)

HSP 1 Score: 82.8 bits (203), Expect = 5.950e-14
Identity = 56/184 (30.43%), Postives = 96/184 (52.17%), Query Frame = 0
Query:  152 VLSYAYLDAADP----SEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            +L++  LD  DP    S +  E D+    V  WS + L  + L++ V++P+ L    V V +DLSRPW +  S+E+W +A+E  +   + QL+  A+++L +A+K+ +   A E                      + +GVL +NLGVP++ V  KAD L+ E   Q   + +I+ +LRR  ++
Sbjct:   64 LLAFQTLDVLDPRAKESGESQESDDVIAHVETWSLNDLSLKDLIKMVVKPQTLYKTVVAVVLDLSRPWTIKSSLEQWLSALEGQLLDQINQLTSEARNELYAAIKQHIL--AYEDPSIDHSVPTPMDTSASEF---MEEGVLSKNLGVPLIFVVAKAD-LRPENSVQ---MDYIEYTLRRVAVR 238          
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Match: A0A3M6VKG5_9STRA (Dynein light intermediate chain n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.100e-13
Identity = 48/182 (26.37%), Postives = 91/182 (50.00%), Query Frame = 0
Query:  152 VLSYAYLDAADPSEQGAE--RDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXXGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLK 331
            +L++  LD  DP  + AE  R +    +  WS + L  E L++  ++P+ L    V + +DLSRPW +  S+E+W +A+E  +   + QL    +++L +++K+ +                            L +GVL +N+GVP+V++  KAD     +     ++ +I+ +LR+F L+
Sbjct:   63 ILAFKTLDVLDPHVKRAEMMRQDVMAHICTWSLNDLTLEDLIKIAIKPQTLQTTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLPSEERNELYASLKQHILTYEDPSVDHSAPVPMDTSTNEF-----LAEGVLSKNIGVPLVIIVAKADLRPENSV----KMDYIEYTLRQFALR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14576.3297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ9_ECTSI1.720e-14995.92Dynein light intermediate chain n=2 Tax=Ectocarpus... [more]
A0A7S3XSQ8_HETAK8.640e-3336.31Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A7M7RH67_STRPU7.470e-1733.33Dynein light intermediate chain n=6 Tax=Echinacea ... [more]
A0A8D9DQ38_9HEMI1.370e-1430.05Dynein light intermediate chain n=2 Tax=Cacopsylla... [more]
F0VZ01_9STRA1.430e-1424.75Dynein light intermediate chain n=1 Tax=Albugo lai... [more]
A0A6A4FS02_9STRA1.780e-1427.57Dynein light intermediate chain n=1 Tax=Phytophtho... [more]
A0A0D2VPW6_CAPO33.740e-1431.05Dynein light intermediate chain n=1 Tax=Capsaspora... [more]
A0A421FAE9_9STRA4.640e-1426.78Dynein light intermediate chain n=5 Tax=Phytophtho... [more]
M4BRF2_HYAAE5.950e-1430.43Dynein light intermediate chain n=1 Tax=Hyaloperon... [more]
A0A3M6VKG5_9STRA1.100e-1326.37Dynein light intermediate chain n=2 Tax=Peronospor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022780Dynein family light intermediate chainPFAMPF05783DLICcoord: 153..331
e-value: 1.7E-19
score: 70.0
NoneNo IPR availablePANTHERPTHR12688:SF0DYNEIN LIGHT INTERMEDIATE CHAIN, ISOFORM Acoord: 13..331
IPR008467Dynein 1 light intermediate chainPANTHERPTHR12688DYNEIN LIGHT INTERMEDIATE CHAINcoord: 13..331
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14576contigE-fasciculatus_F_contig14576:1730..3148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14576.3297.1mRNA_E-fasciculatus_F_contig14576.3297.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14576 1730..3149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14576.3297.1 ID=prot_E-fasciculatus_F_contig14576.3297.1|Name=mRNA_E-fasciculatus_F_contig14576.3297.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=331bp
TLHCCLRVLRLTMAVAKQQKHAPTPASAAAVGATAAAATANLWETMLRDA
MRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNPSGSGAAAASA
VVAPTPEKKGPEGGAGGGGGSGGGGAAASAGASASGGGGSGDPIAGQAFH
PVLSYAYLDAADPSEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEEL
PNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSA
VKERLRGKAKEIGGGGGKMMGGNSTGNDPPGGGLGDGVLERNLGVPMVVV
GCKADSLQSETFEQQQRLHFIQQSLRRFCLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008467Dynein1_light_intermed_chain
IPR022780Dynein_light_int_chain