prot_E-fasciculatus_F_contig14554.3286.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14554.3286.1
Unique Nameprot_E-fasciculatus_F_contig14554.3286.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length115
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14554.3286.1 vs. uniprot
Match: A0A6H5JC72_9PHAE (GLOBIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC72_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.030e-17
Identity = 62/85 (72.94%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MGVVPALSISSASPGSVSTAVPTPSAATPASDRDQGSRGDRGNARTSGAAGAAAR---GGGFKDDVT--AAGDAGGGDSFCFSNE 80
            M VVPALSISSASPGS STAVPTPSAATPASDRDQGSRGDRG ARTSGAA        G GFKDDV   AAG+      FCFSN+
Sbjct:  689 MRVVPALSISSASPGSASTAVPTPSAATPASDRDQGSRGDRGIARTSGAAXXXXXXXGGRGFKDDVDVPAAGEGXXXXXFCFSNQ 773
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BLAST of mRNA_E-fasciculatus_F_contig14554.3286.1 vs. uniprot
Match: D7FHK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.420e-8
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:    1 MGVVPALSISSASPGSVSTAVPTPSAATPASDRDQ 35
            MGVVPALSISSASPGSVSTAVPTPSAATPASDRDQ
Sbjct:  455 MGVVPALSISSASPGSVSTAVPTPSAATPASDRDQ 489
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14554.3286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC72_9PHAE1.030e-1772.94GLOBIN domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FHK7_ECTSI1.420e-8100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14554contigE-fasciculatus_F_contig14554:693..1952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14554.3286.1mRNA_E-fasciculatus_F_contig14554.3286.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14554 693..1961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14554.3286.1 ID=prot_E-fasciculatus_F_contig14554.3286.1|Name=mRNA_E-fasciculatus_F_contig14554.3286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=115bp
MGVVPALSISSASPGSVSTAVPTPSAATPASDRDQGSRGDRGNARTSGAA
GAAARGGGFKDDVTAAGDAGGGDSFCFSNEDKKRESRQQSQQQQQQQRKQ
GRGTSGTAGQHGDSG
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