prot_E-fasciculatus_F_contig14548.3282.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14548.3282.1
Unique Nameprot_E-fasciculatus_F_contig14548.3282.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length420
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14548.3282.1 vs. uniprot
Match: A0A6H5JHB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB0_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 1.570e-112
Identity = 183/249 (73.49%), Postives = 196/249 (78.71%), Query Frame = 0 
Query:    1 MIVPSSPDPPASRESSPPGPSPSDCGAGWGSPPIFSSPWVSKGSGGEPPSGSSGGSAVDSDKGNNNERSPHPGGSRCLDAFTITLHQGYGGRGGHWYKSTLQLQCVCLALCSACRSFPSLHVHIDDQTPHSLWDTELCISSRVPTVLARRXXXXXXXXXXXXXXXXXXXLTWVYGRMSDFVLDAGDRRWKCLEVLRLERFKSRSRLSRPKPSLVIDQDESSFLSSTVWPPSLRQLEFGDGFSVRIATLK 249
            MI PSSPDPPASRE SPPGPSPSDCG  WGSPPI +S  VS GSGG+PP+GSSGG  +D++  N  +RSPHPGGSRCLDAF ITLHQ YGGR GHWYKSTLQLQCVCLALCSACRS P+ HV IDDQTPHSLWD  +  SSRVP VL  R                   LTWVYGRM+DFVLD GDR+WK LEVLRLERFKSRSR  RPKP LV DQ+ESSFLSST WPPSLRQLEFGDGF+VRIATLK
Sbjct:   67 MIAPSSPDPPASRERSPPGPSPSDCGGCWGSPPIGTSSLVSDGSGGKPPTGSSGGGVIDNESANTGKRSPHPGGSRCLDAFAITLHQAYGGRRGHWYKSTLQLQCVCLALCSACRSVPTWHVRIDDQTPHSLWDPNVRTSSRVPVVLGLR-------------------LTWVYGRMNDFVLDTGDRQWKFLEVLRLERFKSRSRPHRPKPRLVFDQEESSFLSSTAWPPSLRQLEFGDGFTVRIATLK 296
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BLAST of mRNA_E-fasciculatus_F_contig14548.3282.1 vs. uniprot
Match: A0A6H5JJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW8_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 3.570e-88
Identity = 167/259 (64.48%), Postives = 180/259 (69.50%), Query Frame = 0 
Query:    1 MIVPSSPDPPASRESSPPGPSPSDCGAGWGSPPIFSSPWVSKGSGGEPPSGSSGGSAVDSDKGNNN---ERSPHPGGSRCLDAFTITLHQGYG-------GRGGHWYKSTLQLQCVCLALCSACRSFPSLHVHIDDQTPHSLWDTELCISSRVPTVLARRXXXXXXXXXXXXXXXXXXXLTWVYGRMSDFVLDAGDRRWKCLEVLRLERFKSRSRLSRPKPSLVIDQDESSFLSSTVWPPSLRQLEFGDGFSVRIATLK 249
            +I PSSPDPPASRE SPPGPS SDCG   GSPPI S   VS GSGG+PPSGSSGG  +D++ G+     ERSPH G    L A  + L            G GGHWYKSTLQLQCV LALCSACRS P+LHV ID Q PHSLWD  +  SSRVP VLA R                   LTWV GRM+DFVLD GDR+WK LEVLRLERFKSRSR  RPKP LV DQ+ESSFLSST WPPSLRQLEFGDGF+VRIATLK
Sbjct:   31 VISPSSPDPPASRERSPPGPSLSDCGDCSGSPPICSFSLVSNGSGGKPPSGSSGGGVIDNENGDXXXXXERSPHAGN---LQAGVVVLTPSLSPCIKLTAGGGGHWYKSTLQLQCVSLALCSACRSVPTLHVRIDGQAPHSLWDPNVRTSSRVPVVLALR-------------------LTWVCGRMNDFVLDTGDRQWKVLEVLRLERFKSRSRPHRPKPRLVFDQEESSFLSSTAWPPSLRQLEFGDGFTVRIATLK 267
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BLAST of mRNA_E-fasciculatus_F_contig14548.3282.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.840e-13
Identity = 45/88 (51.14%), Postives = 50/88 (56.82%), Query Frame = 0 
Query:   75 SRCLDAFTITLHQGYGGRGGHWYKSTLQLQCVCLALCSACRSFPSLHVHIDDQTPHSLWDTE------------LCISSRVPTVLARR 150
            +RCLDAF I L Q   G    WY STL+LQ   L LC ACR+   LHVH+DDQTP SLW +             L ISSRVP V A R
Sbjct:    9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALR 96
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14548.3282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHB0_9PHAE1.570e-11273.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJW8_9PHAE3.570e-8864.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LIJ3_9PHAE1.840e-1351.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 351..393
e-value: 3.6E-10
score: 39.8
coord: 273..304
e-value: 6.6E-5
score: 23.0
coord: 307..349
e-value: 5.5E-11
score: 42.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 187..418
e-value: 1.4E-10
score: 42.2
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 226..354
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 293..397
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 293..397
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 226..354
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 224..398

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14548contigE-fasciculatus_F_contig14548:961..3028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14548.3282.1mRNA_E-fasciculatus_F_contig14548.3282.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14548 869..3240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14548.3282.1 ID=prot_E-fasciculatus_F_contig14548.3282.1|Name=mRNA_E-fasciculatus_F_contig14548.3282.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=420bp
MIVPSSPDPPASRESSPPGPSPSDCGAGWGSPPIFSSPWVSKGSGGEPPS
GSSGGSAVDSDKGNNNERSPHPGGSRCLDAFTITLHQGYGGRGGHWYKST
LQLQCVCLALCSACRSFPSLHVHIDDQTPHSLWDTELCISSRVPTVLARR
LWDTELCISSRVPTVLARRLTWVYGRMSDFVLDAGDRRWKCLEVLRLERF
KSRSRLSRPKPSLVIDQDESSFLSSTVWPPSLRQLEFGDGFSVRIATLKW
PPSLQQLSIGHWCDEHISEVGWPMSLQQISFSGNFNQPIVEVMWPASLKQ
LSFGFEFNQPIAEVVWPASLQQLSFGDDFNQPIVDVVLPPSLQQLSFGDE
FNQPIVGVVWPASLQHLSFGNQFNQPITSVVWPSSLRHLSFGKRFSQCTD
GVAWPVSLQTVTCIGVSLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP