prot_E-fasciculatus_F_contig14545.3280.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14545.3280.1
Unique Nameprot_E-fasciculatus_F_contig14545.3280.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length381
Homology
BLAST of mRNA_E-fasciculatus_F_contig14545.3280.1 vs. uniprot
Match: A0A6H5K0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H2_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.010e-154
Identity = 314/385 (81.56%), Postives = 329/385 (85.45%), Query Frame = 0
Query:    3 FFSVFQGAVYGILAAKLTGQPEDESYSFRTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVDMLLVPTRAKNLVLEQIHLSLDAAFREVSINGERMFGPVVCPRDSRAQFLRALHRSKSTSVPCGGPGSAXXXXXXXXXXXXRPHPSRGGEGSPREAGKRHXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXX----VPAESWGRLPAVAELLLLPGFSTEKPGFLDAGDSGRLLDPGPMVASERRRGSPPGKPAAGSSPAESAGPARSPQGGGDAPVRDEGGGVVHVPSEVAGGGRDGSGAEEGKGFRPEGQAAATAA--VVATSWGGREKEAG 381
            FFSV QGAVYGILAAKL GQP  ESY+ RTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSS+TVLGANGEAVSLARIVNTVVGSVVYLLVDMLLVPTRAKNL+LEQI+LSLDAAFRE+SINGERMFGPVVCPR SRAQFLRALHRS+S  VP GGPG+A             PH SRGGEGSPREAGK+HXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX    VPAESWGR PAVAELLLLPGFSTEKPGFLD G SGRLLDP P+V+SE     P GKPAAGS PAESAGPA SP GG D P RDEGGG++ VPS +AGG RDGSGAEEG+ FR EG+ AA A   V  TSWGGREKEAG
Sbjct:   13 FFSVLQGAVYGILAAKLAGQPGVESYNLRTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSSTVLGANGEAVSLARIVNTVVGSVVYLLVDMLLVPTRAKNLLLEQIYLSLDAAFRELSINGERMFGPVVCPRHSRAQFLRALHRSQSICVPSGGPGAAAA-----------PHASRGGEGSPREAGKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAESWGRPPAVAELLLLPGFSTEKPGFLDGGGSGRLLDPRPIVSSEHGHDLPLGKPAAGSPPAESAGPAGSPAGGEDGPDRDEGGGILDVPSGLAGGRRDGSGAEEGEDFRLEGEVAAAAEKIVSVTSWGGREKEAG 386          
BLAST of mRNA_E-fasciculatus_F_contig14545.3280.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 6.820e-79
Identity = 193/376 (51.33%), Postives = 205/376 (54.52%), Query Frame = 0
Query:    9 GAVYGILAAKLTGQPEDESYSFRTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVDMLLVPTRAKNLVLEQIHLSLDAAFREVSINGERMFGPVVCPRDSRAQFLRALHRSKSTSVPCGGPGSAXXXXXXXXXXXXRPHPSRGGEGSPREAGKRHXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAESWGRLPAVAELLLLPGFSTEKPGFLDAGDSGRLLDPGPMVASERRRGSPPGKPAAGSSPAESAGPARSPQGGGDAPVRDEGGGVVHVP--SEVAGGGRDGSGAEEGKGFRPEGQAAATAAVVAT-SWGGREKEAG 381
            GAVYGILAAKL GQPEDESYSF+TYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVDMLL PTRAKNLVLEQI+LSLDAAFRE                                                                                                                                                PGFLD G SGR LDP P+V+ E+ R SPPGKPAAGS PAESAGPA SP GG D P+RDEG  +V VP  S +AG   +GSGAEEG+G R EG+AAATAAVV+T SWGGREKE G
Sbjct:  781 GAVYGILAAKLAGQPEDESYSFQTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVDMLLAPTRAKNLVLEQIYLSLDAAFRE------------------------------------------------------------------------------------------------------------------------------------------------PGFLDGGGSGRPLDPTPIVSGEQGRDSPPGKPAAGSPPAESAGPAGSPAGGEDGPLRDEGRRIVDVPRGSGLAGVRWEGSGAEEGEGSRLEGEAAATAAVVSTTSWGGREKEPG 1012          
BLAST of mRNA_E-fasciculatus_F_contig14545.3280.1 vs. uniprot
Match: A0A836CDY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.710e-10
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 0
Query:    9 GAVYG--ILAAKLTGQPEDESYSFRTYAIL--LPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVDMLLVPTRAKNLVLEQIHLSLDAAFREVSINGERMFGPVVCPRDSRAQFLRALHRSKSTSVP 161
            GA+YG  +    L     D   + R  A+L   PWVA+ CFFR+S   +YAA+VAAFTAVVI   + +    +G A +LARI NT+ G ++Y+ +D  + P RAK ++   +  +L     EV    + + G + C   + A    A     +   P
Sbjct:  774 GAMYGWVLTDIALRNSTGDHPEALRWCAVLGLPPWVALCCFFRHSRTHAYAAVVAAFTAVVIMIGTFSAKDHSGYA-ALARIQNTIFGLIIYMALDNCIAPVRAKIVLKTHVTHALGTMKNEVEAVEDSLAGSLTCVDTAEAHARAASVDDAAADAP 929          
BLAST of mRNA_E-fasciculatus_F_contig14545.3280.1 vs. uniprot
Match: A0A836CQ15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ15_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.900e-5
Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 0
Query:    9 GAVYGILAAKLTGQPEDESYSFRTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLL-----------VDMLLVPTRAKNLVLEQIHLSLDAAFREVSINGERMFGPV 138
            GA+YG    +L     D +        L PWVA   FF+NS    YAA+V+AFTAV+I   +     A G    L RI NT++G V+Y+            VD L+ P RAK L+  ++  +L      V+    ++ G V
Sbjct:  723 GAMYGWFLTELVNN--DAARKLAAIG-LPPWVAFCAFFKNSKSHGYAAIVSAFTAVIIVLGTFNA-SAVGSVAPLTRIQNTILGLVIYMAXXXXXXXXXXAVDNLVFPVRAKVLLRGELAEALGLMRDAVNCLDAQLLGQV 859          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14545.3280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K0H2_9PHAE1.010e-15481.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD61_ECTSI6.820e-7951.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CDY4_9STRA1.710e-1033.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQ15_9STRA7.900e-533.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30509P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATEDcoord: 9..122
NoneNo IPR availablePANTHERPTHR30509:SF9F3L24.34 PROTEINcoord: 9..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..74
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..48
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14545contigE-fasciculatus_F_contig14545:18..2518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14545.3280.1mRNA_E-fasciculatus_F_contig14545.3280.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14545 18..2518 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14545.3280.1 ID=prot_E-fasciculatus_F_contig14545.3280.1|Name=mRNA_E-fasciculatus_F_contig14545.3280.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=381bp
MFFFSVFQGAVYGILAAKLTGQPEDESYSFRTYAILLPWVAVTCFFRNSS
QFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLLVD
MLLVPTRAKNLVLEQIHLSLDAAFREVSINGERMFGPVVCPRDSRAQFLR
ALHRSKSTSVPCGGPGSAAAPPPPAPPPAARPHPSRGGEGSPREAGKRHR
RHGGGGGGSGGGGRGGEVSGRDGSESAADTAAARAAAAAAAAAAAVPAES
WGRLPAVAELLLLPGFSTEKPGFLDAGDSGRLLDPGPMVASERRRGSPPG
KPAAGSSPAESAGPARSPQGGGDAPVRDEGGGVVHVPSEVAGGGRDGSGA
EEGKGFRPEGQAAATAAVVATSWGGREKEAG
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