mRNA_E-fasciculatus_F_contig14542.3278.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14542.3278.1
Unique NamemRNA_E-fasciculatus_F_contig14542.3278.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: D7FIZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ4_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 2.390e-160
Identity = 229/247 (92.71%), Postives = 240/247 (97.17%), Query Frame = 1
Query:    1 PKVYYASEVTDGNKKTTFNREMGEQPLPENTAATRSDRFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVPCISTSGRPGHATLHV 741
            PKVYYASEVTDGNKKTTFNREMGEQPLPENTA TRSDR+GPADYEGFVDSEGFDGGDGQVGVVGDG NAME FDQ AVGRA DM+A+VKASTMVQESKARQRNAWGGGS+GYADELKE+GMVSYNAAGEDISKVRRQQYENYRNQQEITR+QRADNSVM+AMTGTGT+EDN+ KWKRGGRSSYFDNINAAPE+AVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTV CISTSGRPGHATL+V
Sbjct:   58 PKVYYASEVTDGNKKTTFNREMGEQPLPENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMRAKVKASTMVQESKARQRNAWGGGSSGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTVEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVQCISTSGRPGHATLNV 304          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A835YTJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ3_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.510e-59
Identity = 121/248 (48.79%), Postives = 154/248 (62.10%), Query Frame = 1
Query:    7 VYYASEVTDGNKKTTFNREMGEQPLP--ENTAATRSDRFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAVDQSWNKYSAPVASGMK-DGTEWGETTLTGNEKVEDTVPCISTSGRPGHATLHV 741
            V+  SE+T+GN    F  E  ++ +   E+T        GP  Y G VD + FDGGDGQVG VGDGDNA++ FD ++V         VK +TMV+ESKARQ NAWG  STGYA+ LKEKGM      GED+  VRRQQ EN+RNQQE+   QRA    +DA+TG    E+N   WKRG   SY DN++     A + +WN++  P A+  K DGT W    LTG EK+  TV CIS+SGRPG+AT++V
Sbjct:   51 VFVVSEITEGNVPNKFQEEFMDKGVATTEDTWTAGDANAGPQTYTGLVDGDTFDGGDGQVGCVGDGDNALDKFDSRSV---------VKGATMVKESKARQMNAWGS-STGYAESLKEKGMQKI-INGEDMLAVRRQQLENWRNQQELQASQRAKIQQLDAITGQ---ENNPVGWKRGASRSYMDNLSGGAP-AEESAWNEFKPPTAADAKSDGTSWDHVKLTGKEKITATVQCISSSGRPGYATINV 283          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A7S2UY32_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY32_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.290e-29
Identity = 82/170 (48.24%), Postives = 101/170 (59.41%), Query Frame = 1
Query:  103 RSDRFGPADYEGFVDS--EGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAVDQSWNKY 606
            +++  GP DY GF D     FDGGDGQVGVVGDG N ME FD+  V         +KAS++V+ESK RQRNAWG  STGYA++LK++GM   N  GED  KVRRQQ EN+ NQQE+ R Q A    M AM G      N    K      YF   + A E+  +++WN Y
Sbjct:  134 QTNNHGPVDYRGFSDKGDSDFDGGDGQVGVVGDGKNNMEEFDRSQV---------IKASSIVKESKQRQRNAWGT-STGYAEKLKDQGMTKINKYGEDEMKVRRQQLENWSNQQELKRAQNAVVREMAAMEGIDPALANQRSSK-----DYFGGFSKAQEE--EEAWNVY 286          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A8J2WTM2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTM2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.480e-26
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 1
Query:    7 VYYASEVTDGNKKTTF----NREMGEQPLPENTAATRSD-RFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMV-QESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAV 585
            V Y SEV D +KK  +    + +  E    ++T    +D  +GP +YEGF+D++GFDGGDGQVGVVGDG N ME FD  A   +  +K   K + M  +ESK   +NAWG  +TGYADEL ++GMV  +  GED    RRQQ EN+RNQ+E+  K+    + + ++ G         +++     SY    +  P+D V
Sbjct:   35 VSYLSEVEDADKKKKWWDQDDPDREESNPRDHTGIGEADSNYGPTNYEGFIDADGFDGGDGQVGVVGDGKNHMEEFDMSAED-SRGLKGGRKLNQMGGRESKLNAKNAWGT-TTGYADELAKRGMVEIDEYGEDKLARRRQQLENWRNQEELRMKKDHQMAELASLQGK--------EYRHFNHGSYLQQFDNGPKDEV 223          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A7S3NIJ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIJ0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 6.680e-25
Identity = 82/193 (42.49%), Postives = 110/193 (56.99%), Query Frame = 1
Query:  121 PADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMV-QESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVP 696
            P +Y+GF+DS+GFDGGDGQVGVVGDG NAME FD      +  +K+ ++++ +   ESK  Q+ AWG  STGYAD+L +KGMV  +  GED  K RRQQ EN++NQ EI  +++A  + +  + G             GG  SYFD I A PE        K +AP  S    GT + E   T +  +E   P
Sbjct:   75 PENYDGFIDSDGFDGGDGQVGVVGDGTNAMETFDT-----SQSVKSNLRSNAIGGTESKQTQKVAWGY-STGYADDLAKKGMVDIDEYGEDRLKARRQQLENWQNQNEIRAQKQAQMNELAQLQGKSLSS--------GGAQSYFDVI-AGPE--------KKAAPAPSTT--GTIYLEPKATSDGHIEIHAP 242          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A7S2AVT2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVT2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.850e-23
Identity = 92/246 (37.40%), Postives = 122/246 (49.59%), Query Frame = 1
Query:    7 VYYASEVTDGNKKTTFNR-EMGEQPLP----ENTAATRSDRFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQ-KAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKE-KGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWK-RGGRSSYFDNINAAPEDAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVPCISTSGRP 720
            V Y SE+ D +KK      E GE+P      E     +     P +Y+ F+D +GFDGGDGQVGVVG  DNAME FD  +AVG ++        +    ESK  Q+N +G  STGYA+EL E + MV  +  GED    RRQQYEN+RNQ+E+   Q  +   +  +TG         K+  R G SSYF+ +NA       + WN        G KD T +      G  K + T     T+  P
Sbjct:   43 VSYLSELEDDDKKKEREAAEGGEKPYEKYEREQYGVPQKGALQPENYDSFIDDDGFDGGDGQVGVVGSEDNAMETFDMSQAVGTSNARGRVFDNAIGGTESKMTQKNVFGR-STGYAEELAENEDMVDIDEYGEDRLSARRQQYENWRNQRELKGNQIMELEDLAGVTGQ--------KYDPRSGSSSYFEALNAGTNQDTKE-WNMI------GGKDATTFSTEAAVGLSKGDITAVIEMTANFP 272          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A7S1U0C9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0C9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.180e-20
Identity = 85/199 (42.71%), Postives = 109/199 (54.77%), Query Frame = 1
Query:   13 YASEVTDGNKKTTFNREMGEQPLPENTAATRSDRFGPA-DYEGFVD-SEGFDGGDGQVGVVGDGDNAMEAFDQK----------AVGRAHDMKA----QVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNI 561
            Y S++ D     T      E+    +   T SD  G A + + FVD +EGFDGGDGQVGVVGDG NAME FD+            V  A D+K     +++ S +V +SK+ Q  ++G   TGYA+ELK KGM S    GED  KVRRQQ EN+  QQ +   QR     MDA+TG    E  + K KRGG   YFD++
Sbjct:   74 YLSQIEDDE---TLKERAKEREKYLDGIVTESDAQGAASNMDAFVDFAEGFDGGDGQVGVVGDGSNAMETFDRSEVVSGDSSRNTVMMAKDLKQSASERLERSKLVADSKSTQILSFGAEGTGYAEELKAKGM-SKMKDGEDQLKVRRQQLENWHQQQGLRSAQRQRLDDMDALTGG---EAYAAK-KRGGSRGYFDDL 264          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: L1IQJ4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQJ4_GUITC)

HSP 1 Score: 84.3 bits (207), Expect = 2.750e-15
Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 1
Query:   13 YASEVTDGNKKTTFNREMGEQPLPENTAATRSDRFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAV------GRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYA--DELKEKGMVSYNA-AGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAM 486
            Y  ++     KTT  +  G Q +P+             DY+GF+D EGFDGGDGQVGVVGDG NAME F+ + V      G      A   +   + +    + NAWG  ST  +  D+LK  GMV  +   GED  +V+RQQYEN+ NQQ+  + +R     M+A+
Sbjct:   53 YLDDLDPPKAKTTDGK--GNQIMPD------------MDYKGFIDGEGFDGGDGQVGVVGDGKNAMEEFEDRMVIDNSIGGAGRGKVAGGSSGNRIDK----RWNAWGADSTDNSVKDQLKADGMVDIDIFTGEDKKQVQRQQYENWFNQQKQWQAERKLRDQMEAL 201          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A1E7FB47_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB47_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.990e-12
Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 1
Query:  118 GPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAMTGTGTIED 510
            GP D++ +V+ + FDGGDGQ+GV GDG+  ++ FD   + ++  M A               +NAWG  +TGYAD L E+G+        D S+   QQ EN+ NQQE+ +K++A  S+ +      + ED
Sbjct:   39 GPGDWDSYVEFDEFDGGDGQMGVAGDGNKGLDKFDMSTIAKSKSMSA---------------KNAWGT-NTGYADTLIEQGV--------DTSRA--QQLENWHNQQEVLQKRKAQRSLTEDFDSVDSTED 143          
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Match: A0A6U3CV07_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3CV07_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.920e-12
Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  109 DRFGPADYEGFVDSEGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKARQRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITRKQRADNSVMDAM 486
            DR+G  D+  FVD E FDGGDGQ+GV GDG   +E   ++   +AH M ++ +++          RNAWG  S+GYADEL EKGM +           R QQ EN++NQQE+   + +  ++ DA 
Sbjct:   69 DRYGVGDWSNFVDFEEFDGGDGQMGVAGDGSKGLE---KEWKNQAH-MTSRARSA----------RNAWGS-SSGYADELVEKGMEA----------TRAQQLENWQNQQELRNARNSHKAITDAF 169          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14542.3278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FIZ4_ECTSI2.390e-16092.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTJ3_9STRA3.510e-5948.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UY32_9STRA5.290e-2948.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J2WTM2_9STRA3.480e-2639.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NIJ0_9STRA6.680e-2542.49Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2AVT2_9STRA2.850e-2337.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1U0C9_9STRA1.180e-2042.71Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
L1IQJ4_GUITC2.750e-1538.32Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A1E7FB47_9STRA2.990e-1235.88Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6U3CV07_9STRA5.920e-1240.48Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14542contigE-fasciculatus_F_contig14542:3..3190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score467.6
Seed ortholog evalue3.6e-129
Seed eggNOG ortholog2880.D7FIZ4
EggNOG OGs2E3A2@1,2SADX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_005030.1
Exons7
Model size741
Cds size741
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927940.2640724-CDS-E-fasciculatus_F_contig14542:2..1151622927940.2640724-CDS-E-fasciculatus_F_contig14542:2..115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 3..115 +
1695995759.2885995-CDS-E-fasciculatus_F_contig14542:2..1151695995759.2885995-CDS-E-fasciculatus_F_contig14542:2..115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 3..115 +
1622927940.2792962-CDS-E-fasciculatus_F_contig14542:563..6501622927940.2792962-CDS-E-fasciculatus_F_contig14542:563..650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 564..650 +
1695995759.3010538-CDS-E-fasciculatus_F_contig14542:563..6501695995759.3010538-CDS-E-fasciculatus_F_contig14542:563..650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 564..650 +
1622927940.2909-CDS-E-fasciculatus_F_contig14542:1113..12431622927940.2909-CDS-E-fasciculatus_F_contig14542:1113..1243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 1114..1243 +
1695995759.3103235-CDS-E-fasciculatus_F_contig14542:1113..12431695995759.3103235-CDS-E-fasciculatus_F_contig14542:1113..1243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 1114..1243 +
1622927940.3031347-CDS-E-fasciculatus_F_contig14542:1623..17131622927940.3031347-CDS-E-fasciculatus_F_contig14542:1623..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 1624..1713 +
1695995759.3200004-CDS-E-fasciculatus_F_contig14542:1623..17131695995759.3200004-CDS-E-fasciculatus_F_contig14542:1623..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 1624..1713 +
1622927940.3153317-CDS-E-fasciculatus_F_contig14542:2007..21151622927940.3153317-CDS-E-fasciculatus_F_contig14542:2007..2115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 2008..2115 +
1695995759.329627-CDS-E-fasciculatus_F_contig14542:2007..21151695995759.329627-CDS-E-fasciculatus_F_contig14542:2007..2115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 2008..2115 +
1622927940.328393-CDS-E-fasciculatus_F_contig14542:2557..26621622927940.328393-CDS-E-fasciculatus_F_contig14542:2557..2662Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 2558..2662 +
1695995759.3392267-CDS-E-fasciculatus_F_contig14542:2557..26621695995759.3392267-CDS-E-fasciculatus_F_contig14542:2557..2662Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 2558..2662 +
1622927940.338408-CDS-E-fasciculatus_F_contig14542:3082..31901622927940.338408-CDS-E-fasciculatus_F_contig14542:3082..3190Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 3083..3190 +
1695995759.350897-CDS-E-fasciculatus_F_contig14542:3082..31901695995759.350897-CDS-E-fasciculatus_F_contig14542:3082..3190Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14542 3083..3190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14542.3278.1prot_E-fasciculatus_F_contig14542.3278.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14542 3..3190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14542.3278.1

>prot_E-fasciculatus_F_contig14542.3278.1 ID=prot_E-fasciculatus_F_contig14542.3278.1|Name=mRNA_E-fasciculatus_F_contig14542.3278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=247bp
PKVYYASEVTDGNKKTTFNREMGEQPLPENTAATRSDRFGPADYEGFVDS
EGFDGGDGQVGVVGDGDNAMEAFDQKAVGRAHDMKAQVKASTMVQESKAR
QRNAWGGGSTGYADELKEKGMVSYNAAGEDISKVRRQQYENYRNQQEITR
KQRADNSVMDAMTGTGTIEDNSGKWKRGGRSSYFDNINAAPEDAVDQSWN
KYSAPVASGMKDGTEWGETTLTGNEKVEDTVPCISTSGRPGHATLHV
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mRNA from alignment at E-fasciculatus_F_contig14542:3..3190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14542.3278.1 ID=mRNA_E-fasciculatus_F_contig14542.3278.1|Name=mRNA_E-fasciculatus_F_contig14542.3278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3188bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14542:3..3190+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGAAGGTATACTACGCCTCTGAGGTGACGGACGGAAACAAGAAGACGAC ATTCAACCGGGAGATGGGCGAGCAGCCCTTGCCGGAGAACACGGCCGCAA CAAGATCCGACAGGTACATATACACGTGATGTTGAAGGTGCCACTCGACG AACAATGGGTGCGCACCCCAGGGGCTGACTGCTAAATGAACGCGGGTACC TCCGTTTGGTGGATGGGGGTAGGAAGCCACCCGTCCTGCGTTGAAAATCA CTGTCGTCTGTCATGTGATGCTTGCTCAAAGAGCGGTTGAAAACTGGCAT GAGCCACGTGGTGCCGGATGTAGGGATTCGCGAGATCCTGGAGGCCGTTG TATCGATCGAGTACAGTACACAACAACCAGCATACATTCCGCCACGTAAA TCTTCGTGGGAATATTGCTGCTTCTTCAGGCTACTGTATGTTTGCCGATA CTGTCAGCTTTTCTGGGTTATTTTGCGATAGTCTATCCGGCCGACGTTGT CCGCTCTCTCTCACGCGTGTCCCTCATTTGCCTTTGTTGATAATCGGATC GTTCGCGACAGGTTCGGCCCCGCGGACTACGAGGGCTTCGTCGACAGCGA AGGATTTGACGGGGGTGACGGACAGGTCGGCGTCGTCGGAGACGGTGAGT GCGCTCGCTCCTGTACTAGGTCGCCGCCGTAGCGAGACGTGGTTTCGTGC ACGAAGAGGCCTGCCTTTGTTGCGTCACTCGAAAAAAAACAAGCCCCTAT CCGTAATTCGTTCACCTCGCTGTCTCTTGAACTGCTGTCCTTAGTCGCCC ATGTGCTCCCATGAACGGGTGAGCGGCCAGGAATGGGTAGAAGTGCCCCC ATCCCCCCCGAATTCGAGTTTGTTTACTTCAGTAGCGAATTCGCGGGAGG AAGATCAAACCCTTGCTACGTTCCGAACTCCAGCACATCGGCTCTTTCCA CAGCGCTCCGGGCTCTCGTTACGGGCTCCATTTGCTGTCCAGGATGGCTT GATTGATTTCGTCTCTTTTTTCTTTTCACTCCAACCTGTATACTTTTGCA CCTTCTTGACCCGTTGCTCTCTCCTTGCCCTCTTTCCACGGTTGACCCTT TCCACAGGAAGTAATGCGATGGAGGCGTTCGACCAGAAAGCCGTCGGCCG AGCTCACGACATGAAGGCGCAGGTCAAGGCGTCTACGATGGTCCAGGAGT CGAAGGCCCGCCAAAGGAACGCGTGGGGCGGCGGCAGCACTGTAAGCGAA CATAGCATTTTTCTGGGACATAGCATACATGTGCCTACCATCGAGCGAGC ACTCTGTGTGGTACCGTACGGATGTCTCGACAAAGGGAACATGGTACCCT GCGCACTCGATCGCCGACCCCTTGCCTTGTTTGTTTGGCGGCTGTGGTCG TGGCGTTGATGTAAATGCCTGTCCCTGTTGGGGTGGCCTTCGTGTTAACA CGTCTCTCTCTGATCAAGCAGAGCGTGAGCTGGGGAACAACCTCCTACGA ACCAGTAAGGTCCAGAGCCCATTCGTGTATTTTTCTTTTTTTGGTACTGT AGTAGGTGTCCCGTTGTGGCCGTCCACACGCCATTCAACGCATCAACGGT TGTGTGCGGGATTAATCGCAGGGATACGCGGACGAGCTCAAGGAGAAGGG TATGGTATCGTACAACGCAGCAGGGGAGGACATCAGCAAGGTCCGCCGCC AGCAGTATGAGGTGAGCGGTAAGATGCGGGAGCGTATCCAGCGGCGCTAT TAGTGTGAACCTCGACACGAACCATTGTGATGGGTGCAAGTGGTATATGC ATGTTGTAGAAGAAGAAAAAAATATCGGTGAAAGGTTGGATGTTTATGGC GTTTCTCACATGTCCCGCGAAGCGAAGATGAAAATGTTGTTGTTACTGCT TCGCCCCAAGGTGTGCGTGCACAAATTCTTGCTCTGTTACCCTCTTGCGG TGCATTCCTTTTGACCCGGTCCCATTTTTGTTGTCGTTTGCCGTACTACA CACAGAACTACCGCAACCAGCAGGAAATCACGAGGAAGCAACGCGCCGAC AACAGCGTGATGGATGCTATGACGGGAACGGGCACGATAGAGGACAACTC CGGCAAGTGGAAGGTGGGTGAAGGGCCATGGTTGTAGACTCAACGGAGGT GGTTGGCTGCGAAGTCTTGTTCACATACCGAAACCGACATACTTTTTATC ATATCGTAGACGTGGAGCATGGTAGCGAGAGCTCTTGGTATGCGGTCATT TCCACCTCACGTCTGATTGGAGCACAACTTCTTCCATATGCAACCCTCGA TTATATCAAAAACAGCAAGAAAACCCAGGCGCGGTGTCCTGCGTGAGTGC TGTTTGTTGGCGGCGATGTGTGGCTTAAAGTGGGCGGCACGGTTCACAGT GGATGCTTCCGCAAAGTTGGTTATATTGTATGCTGCGTGTGCGAACGCTC TTTGCTGTCATGTCCTACACTCCGTGCCTTTGCTTCACACGCGCAACCTC TCTCCGCTTGGAAACCCTTCGTCTTTCTCTCTTCGCACGCTTGACGCCCT AGTAGAGGGGCGGCAGGTCCAGCTACTTCGACAACATTAACGCGGCCCCT GAAGACGCGGTGGACCAGAGCTGGAATAAATACAGCGCCCCGGTTGCGTC TGGGATGAAGGTGGGTTCAGTTTTGGGCCGACCACGAGCGTGGCGTTTGG TAGAACGGCGCGTATGACTGCGACGAGTTCAAAGAGTTGTGCTTGTATGT TCGCCATCAAAGAGAAGTGTACTCATGTGTGCAAGTGTGACATTTCGCCC ACCGAACAACAACAGGATGAAGCTTAGGTATTGGGGCTTGGTCTCAGAGT TGGCCGAGTGCAGAATCTGGAGCTTCTGGAGTGTTGGTACAATCGGTTGA GTTTTGGATTTGAGTTGAGATAGTTTTGGCAAGCGGCACCATCATACTCT GCAAAATTCTCTTTGATCTTCGCCGATGGTAGAAGCACGGGCTGGGTTAT TTGTGTCGAATGCATACAAACGTGTCTGTTCATGTACCGTCGTGCATACG TCACTTTTTTGTTGTTTTCACCTTGGACAGGATGGCACTGAGTGGGGGGA GACCACCCTGACCGGCAACGAGAAGGTCGAGGATACGGTGCCGTGCATCT CCACCAGTGGGCGACCAGGACACGCTACTCTCCACGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14542:3..3190+

>mRNA_E-fasciculatus_F_contig14542.3278.1 ID=mRNA_E-fasciculatus_F_contig14542.3278.1|Name=mRNA_E-fasciculatus_F_contig14542.3278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1482bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14542:3..3190+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGAAGGTATACTACGCCTCTGAGGTGACGGACGGAAACAAGAAGACGAC
ATTCAACCGGGAGATGGGCGAGCAGCCCTTGCCGGAGAACACGGCCGCAA
CAAGATCCGACAGCCGAAGGTATACTACGCCTCTGAGGTGACGGACGGAA
ACAAGAAGACGACATTCAACCGGGAGATGGGCGAGCAGCCCTTGCCGGAG
AACACGGCCGCAACAAGATCCGACAGGTTCGGCCCCGCGGACTACGAGGG
CTTCGTCGACAGCGAAGGATTTGACGGGGGTGACGGACAGGTCGGCGTCG
TCGGAGACGGTGAGTTCGGCCCCGCGGACTACGAGGGCTTCGTCGACAGC
GAAGGATTTGACGGGGGTGACGGACAGGTCGGCGTCGTCGGAGACGGTGA
TAATGCGATGGAGGCGTTCGACCAGAAAGCCGTCGGCCGAGCTCACGACA
TGAAGGCGCAGGTCAAGGCGTCTACGATGGTCCAGGAGTCGAAGGCCCGC
CAAAGGAACGCGTGGGGCGGCGGCAGCACTTAATGCGATGGAGGCGTTCG
ACCAGAAAGCCGTCGGCCGAGCTCACGACATGAAGGCGCAGGTCAAGGCG
TCTACGATGGTCCAGGAGTCGAAGGCCCGCCAAAGGAACGCGTGGGGCGG
CGGCAGCACTGGATACGCGGACGAGCTCAAGGAGAAGGGTATGGTATCGT
ACAACGCAGCAGGGGAGGACATCAGCAAGGTCCGCCGCCAGCAGTATGAG
GGATACGCGGACGAGCTCAAGGAGAAGGGTATGGTATCGTACAACGCAGC
AGGGGAGGACATCAGCAAGGTCCGCCGCCAGCAGTATGAGAACTACCGCA
ACCAGCAGGAAATCACGAGGAAGCAACGCGCCGACAACAGCGTGATGGAT
GCTATGACGGGAACGGGCACGATAGAGGACAACTCCGGCAAGTGGAAGAA
CTACCGCAACCAGCAGGAAATCACGAGGAAGCAACGCGCCGACAACAGCG
TGATGGATGCTATGACGGGAACGGGCACGATAGAGGACAACTCCGGCAAG
TGGAAGAGGGGCGGCAGGTCCAGCTACTTCGACAACATTAACGCGGCCCC
TGAAGACGCGGTGGACCAGAGCTGGAATAAATACAGCGCCCCGGTTGCGT
CTGGGATGAAGAGGGGCGGCAGGTCCAGCTACTTCGACAACATTAACGCG
GCCCCTGAAGACGCGGTGGACCAGAGCTGGAATAAATACAGCGCCCCGGT
TGCGTCTGGGATGAAGGATGGCACTGAGTGGGGGGAGACCACCCTGACCG
GCAACGAGAAGGTCGAGGATACGGTGCCGTGCATCTCCACCAGTGGGCGA
CCAGGACACGCTACTCTCCACGTGGATGGCACTGAGTGGGGGGAGACCAC
CCTGACCGGCAACGAGAAGGTCGAGGATACGGTGCCGTGCATCTCCACCA
GTGGGCGACCAGGACACGCTACTCTCCACGTG
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