mRNA_E-fasciculatus_F_contig14541.3277.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.240e-52 Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 EEFDRFMARFVDTSVEEYPMEELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPLEVPKLSKAQASEAVPARL 333
+EFDRFMARF DT++ +YP+E LL+FWAG GQ LYPNMARAAR+LLSVPASSAVLERDFSTAGRLIT ARSRLSAAYVEMVLFLNGNQ+YIP+EVPKLSK+Q EAVP RL
Sbjct: 690 QEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRL 800
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.670e-18 Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 100 LYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRL-SAAYVEMVLFLNGNQQYIPLEVPKLSKAQASEAVPARL 333
+YP +AR AR++ PAS+AVLERDFS AGR++T +R + S YVEM+LFL+GN IP ++ KL++A A +P RL
Sbjct: 5 VYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRL 83
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 4.540e-18 Identity = 43/91 (47.25%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 61 EELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPLEVPKLSKAQASEAVPARL 333
E++L +W YP +AR AR++ PAS+AVLERDFS AGR++T +RS + + YVEM++FL+GN IP ++ KL++A A +P RL
Sbjct: 605 EDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRL 694
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.740e-16 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 61 EELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPLEVPKLSKAQASEAVPARL 333
E++L +W YP +AR AR+++ AS+AVLE DFS AGR++T +RS + + YVEM+LFL+GN IP ++ KL++A A +P RL
Sbjct: 378 EDVLKWWKMWAHA-YPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRL 467
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.570e-16 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 37 TSVEEYPMEELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPLEVPKLSKAQASEAVPARL 333
T ++ E +L++W G+ LYP +ARAAR++ PAS+AVLERDF+ A ++ +RS A YVEMVLFL+GN IP ++P+L +P RL
Sbjct: 537 TLTDDLSCEGVLEWWKKWGR-LYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRL 634
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 5.370e-16 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 40 SVEEYPMEELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPLEVP 288
+++E + +L +W + YP +ARAAR++ PAS+AVLE DF AGR++T +RS A YVEM+LFL+GN IP ++P
Sbjct: 28 TIDELSCDSVLKWWKRW-MSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: H3GTQ6_PHYRM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTQ6_PHYRM) HSP 1 Score: 67.0 bits (162), Expect = 5.580e-12 Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 124 ARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPL-EVPKLSKAQASEAVPARL 333
AR++ S+P+SSA +ERDF TAGR++T R+ L++ V+M FLN N+ Y+ + + PK+S A ASE VP+ +
Sbjct: 11 ARVVFSLPSSSAQIERDFGTAGRMVTPQRNSLASHNVDMTTFLNCNRCYVNIAQCPKVSAAAASERVPSNV 81
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: UPI0019661A93 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019661A93) HSP 1 Score: 68.6 bits (166), Expect = 1.110e-11 Identity = 38/86 (44.19%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 4 EFDRFMARFVDTSVEEYPMEELLDFWAGGGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGN 261
E+D ++ +++ V E +LL++W + ++P++AR AR +LS+PA+SA ERDFSTAG +I+E RS+LS V+ VLFL+ N
Sbjct: 150 EYDE-VSTYIELKVTEDDHFDLLNWWKEHSE-MFPSLARIARSILSIPATSATSERDFSTAGCVISERRSQLSPETVDDVLFLHSN 233
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A225UGF7_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGF7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.380e-11 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 10 DRFMARFVDTSVEEYPMEELLDFWAG----GGQTLYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPL-EVPKLSKAQASEAVPARL 333
D+ + R++ T + +L FW G L P +AR +L S+P+SSA +ERDF TAGR++T RS L+ V+M FLN N+ Y+ + + PKLS A E P+ +
Sbjct: 7 DKQLDRWLTTPTS---FDLVLSFWKRQQEQGNFRLLPLVAR---VLFSIPSSSAQIERDFGTAGRMVTSQRSSLAPCNVDMTTFLNCNRTYVDITQCPKLSPNTADERRPSNV 113
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Match: A0A662WEP3_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEP3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.850e-11 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 1 EEFDRFMARFVDT-SVEEYPMEELLDFWAGGGQT-LYPNMARAARILLSVPASSAVLERDFSTAGRLITEARSRLSAAYVEMVLFLNGNQQYIPL-EVPKLSKAQASEAVPARL 333
EEFDR++ +V E E +L +W + + + AR++ S+PASSA +ERDF AG+++ RS L+ ++M FLN N+ Y L + PKLS ASE +P+ +
Sbjct: 448 EEFDRWITTPTSLRAVREGQFESVLSYWRRQSEEGTFRLLPLVARVVFSMPASSAQIERDFGVAGQMVVPHRSSLAPYNIDMATFLNCNRAYCDLTQCPKLSVETASEQIPSNM 561 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14541.3277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14541.3277.1 >prot_E-fasciculatus_F_contig14541.3277.1 ID=prot_E-fasciculatus_F_contig14541.3277.1|Name=mRNA_E-fasciculatus_F_contig14541.3277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp MARFVDTSVEEYPMEELLDFWAGGGQTLYPNMARAARILLSVPASSAVLEback to top mRNA from alignment at E-fasciculatus_F_contig14541:391..723- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14541.3277.1 ID=mRNA_E-fasciculatus_F_contig14541.3277.1|Name=mRNA_E-fasciculatus_F_contig14541.3277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=333bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14541:391..723- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14541:391..723- >mRNA_E-fasciculatus_F_contig14541.3277.1 ID=mRNA_E-fasciculatus_F_contig14541.3277.1|Name=mRNA_E-fasciculatus_F_contig14541.3277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=630bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14541:391..723- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |