mRNA_E-fasciculatus_F_contig14536.3275.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14536.3275.1
Unique NamemRNA_E-fasciculatus_F_contig14536.3275.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 7.130e-141
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 1
Query:   25 QVTKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            QVTKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHP EQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK
Sbjct:  695 QVTKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPPEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 900          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.700e-135
Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 1
Query:   25 QVTKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            QVTKAN LYIREVSVMDTVHLVKPGFHRRY PAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHP EQQTPKDDRLQQWYVTMLEEAKKRG+VEGLTNLFDEYWSNPETADAR+LPYLEGDYWIGEAENIIK
Sbjct: 1623 QVTKANNLYIREVSVMDTVHLVKPGFHRRYSPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPPEQQTPKDDRLQQWYVTMLEEAKKRGVVEGLTNLFDEYWSNPETADARKLPYLEGDYWIGEAENIIK 1828          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A835Z331_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z331_9STRA)

HSP 1 Score: 303 bits (776), Expect = 4.760e-96
Identity = 140/201 (69.65%), Postives = 166/201 (82.59%), Query Frame = 1
Query:   40 NTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            N ++I+ VS  D  H+VK  F RR+   G +P++F  RSKC++LFQELDGVD LLFGMYVYEYGH C  PNQRRVY+SYLDSVHYFRPR YRT+VY EI++AYLE VK RGFHTAHIWACPP KGDDYILYCHP +Q+TPKDDRLQ WY++MLE+A++RGI+E +TNL+DE WS+   AD   +PYLEGDYWIGEAE IIK
Sbjct:  125 NEIHIKVVSNQDVTHVVKANFARRFRARG-FPSEFLARSKCVLLFQELDGVDCLLFGMYVYEYGHACGPPNQRRVYVSYLDSVHYFRPRQYRTVVYKEIIVAYLEYVKRRGFHTAHIWACPPLKGDDYILYCHPEDQKTPKDDRLQNWYLSMLEDAQQRGIIEHITNLYDECWSDVN-ADPTAIPYLEGDYWIGEAETIIK 323          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A835YGT9_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT9_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.180e-95
Identity = 145/202 (71.78%), Postives = 166/202 (82.18%), Query Frame = 1
Query:   37 ANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            A  L+IR VS  D  H+VKP F RRY  A  +PA+F  RSKC++LFQELDGVD LLFGMYVYEYGH C  PNQRRVY+SYLDSVHYF PR YRT+VY EI++AYL  VK RGFHTAHIWACPP KGDDYILYCHP +Q+TPKDDRLQ WY+TMLE+A++RG+VE +TNL+D+ WS+P  AD   LPYLEGDYWIGEAE IIK
Sbjct:  473 ARKLHIRVVSNQDVTHVVKPNFARRYR-ARNFPAEFQARSKCVLLFQELDGVDCLLFGMYVYEYGHACGPPNQRRVYVSYLDSVHYFHPRAYRTVVYKEIIVAYLAWVKRRGFHTAHIWACPPLKGDDYILYCHPEDQKTPKDDRLQNWYLTMLEDAQRRGVVESVTNLYDDCWSDPN-ADPTVLPYLEGDYWIGEAETIIK 672          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A7S3K383_9STRA (Histone acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K383_9STRA)

HSP 1 Score: 291 bits (746), Expect = 3.310e-91
Identity = 131/202 (64.85%), Postives = 163/202 (80.69%), Query Frame = 1
Query:   37 ANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            A+ +Y+R++S +D  H VK    ++Y     YP++FPVRSKC+VLFQE+DGVDV+LFGMYVYEYGH CP PNQRRVY+SYLDS+HYFRPR YRT+VYHE+LIAYL  VK RGFHTAH+WACPP KGDDYI +CHP +Q+TPKDDRL+ WY+++LE+AK  GIV  +TNL+DEY    + AD   +P  EGDYW GEAEN++K
Sbjct:  119 ADGIYVRQLSNIDKTHQVKSRLIKQYENT-HYPSEFPVRSKCVVLFQEIDGVDVILFGMYVYEYGHDCPQPNQRRVYVSYLDSIHYFRPRKYRTLVYHEMLIAYLAHVKQRGFHTAHLWACPPCKGDDYIFFCHPEDQKTPKDDRLRYWYISLLEKAKTEGIVTRITNLWDEYLK--KDADVSNVPNFEGDYWPGEAENVLK 317          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: F0YI83_AURAN (Histone acetyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI83_AURAN)

HSP 1 Score: 294 bits (753), Expect = 4.890e-91
Identity = 131/202 (64.85%), Postives = 164/202 (81.19%), Query Frame = 1
Query:   37 ANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            A+ +Y+R++S ++  H VKP   +RY    +YP +FPVRSKCI+LFQE+DGVDV+LFGMY+YEYGH CP PNQRRVY+SYLDSV+YFRPR YRT+VYHE+LIAYL   K RGFHTAHIWACPP KGDDYI +CHP +Q+TPKDDRL+ WY+T+LE+AK+ GIV  +TNL+DE++      D   +PY EGDYW GEAEN++K
Sbjct:  267 ASAVYVRQLSNIEKAHQVKPRILQRYADQ-KYPREFPVRSKCILLFQEMDGVDVILFGMYLYEYGHNCPQPNQRRVYVSYLDSVYYFRPRQYRTLVYHEMLIAYLAHTKERGFHTAHIWACPPCKGDDYIFFCHPEDQKTPKDDRLRSWYITLLEKAKEEGIVTHITNLWDEHFQ--ADYDVNHIPYFEGDYWPGEAENVVK 465          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A7R9YAI7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI7_9STRA)

HSP 1 Score: 297 bits (760), Expect = 6.650e-90
Identity = 140/208 (67.31%), Postives = 167/208 (80.29%), Query Frame = 1
Query:   22 KQVTKANTLYIREVSVMDTVHLVKPGFHRRY-GPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            +QV K   + IR VS ++ VH V+  F +RY G  G+YP +FPVRSKCIVLFQ++DGVDV+LF MYVYEYGH CP PN+RRVYISYLDSVHY RPR YRT VYHEIL +YLE V+ RGFHTAHIWACPP KGDDYI Y HP  Q+TP+D+RL+QWY TM+E AK RG V  ++NL+DEY+  P+ AD ++LPY EGDYW+GEAENIIK
Sbjct:  916 EQVEKCPAMTIRMVSNVEKVHTVREKFLKRYRGEKGDYPEEFPVRSKCIVLFQKVDGVDVILFAMYVYEYGHKCPEPNRRRVYISYLDSVHYLRPRAYRTEVYHEILASYLEYVRIRGFHTAHIWACPPLKGDDYIFYAHPETQKTPRDERLRQWYQTMIERAKHRGHVFSVSNLYDEYFVGPD-ADMKKLPYFEGDYWVGEAENIIK 1122          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A6S8EDF0_9STRA (Histone acetyltransferase n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EDF0_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.460e-88
Identity = 131/202 (64.85%), Postives = 163/202 (80.69%), Query Frame = 1
Query:   37 ANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            A+ +Y+R++S +D  H VK    ++Y     YP++FPVRSKC+VLFQE+DGVDV+LFGMYVYEYGH CP PNQRRVY+SYLDS+HYFRPR YRT+VYHE+LIAYL  VK RGFHTAH+WACPP KGDDYI +CHP +Q+TPKDDRL+ WY+++LE+AK  GIV  +TNL+DEY    + AD   +P  EGDYW GEAEN++K
Sbjct:  706 ADGIYVRQLSNIDKTHQVKSRLIKQYENT-HYPSEFPVRSKCVVLFQEIDGVDVILFGMYVYEYGHDCPQPNQRRVYVSYLDSIHYFRPRKYRTLVYHEMLIAYLAHVKQRGFHTAHLWACPPCKGDDYIFFCHPEDQKTPKDDRLRYWYISLLEKAKTEGIVTRITNLWDEYLK--KDADVSNVPNFEGDYWPGEAENVLK 904          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A7S2W4U4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U4_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.760e-87
Identity = 127/204 (62.25%), Postives = 160/204 (78.43%), Query Frame = 1
Query:   34 KANTLYIREVSVMDT-VHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            KA  +++R++S + T  HLV+     RY   G +P +FPV SKC+VLF+ +DGVDV+LFGMYVYEYGH  P PN RRVY+SYLDSV+YFRPR +RTMVYHE+LIAY++  K RGFHT H+WACPP KGDDYI +CHP EQ+TPKDDRL+QWY+TMLE+ +  G V  LTNLFDE++ +P++  A  +PY EGDYWI EAE I+K
Sbjct:  314 KAGNIFVRQLSNLKTKTHLVRNRMLERYKDQG-FPQEFPVTSKCVVLFENIDGVDVILFGMYVYEYGHKAPQPNHRRVYVSYLDSVYYFRPRQFRTMVYHEMLIAYMQYAKQRGFHTCHLWACPPCKGDDYIFFCHPEEQKTPKDDRLRQWYITMLEKCQTEGSVVKLTNLFDEHFKDPDSR-AVDVPYFEGDYWISEAEAILK 515          
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Match: A0A8J2ST16_9STRA (Histone acetyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST16_9STRA)

HSP 1 Score: 281 bits (718), Expect = 5.830e-84
Identity = 125/204 (61.27%), Postives = 161/204 (78.92%), Query Frame = 1
Query:   31 TKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPVRSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFRPRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQQTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYLEGDYWIGEAENIIK 642
            +K   +Y+R++S +D +H VKP   +RY    +YP +FP+RSKC++LFQE+DGVDV+LFGMY+YEYGH CP PN RRVY+SYLDSV+YFRPR  RT+VYHE+LIAYL   K RGFHTAHIWACPP KGDDYI +CHP +Q+TPKDDRL+ WY+T+L +A+  G+V  +TNL+DE + +    +  Q+PY EGDYW GEAEN+ K
Sbjct:  749 SKPTPVYVRQLSNIDKMHQVKPKILKRYSQH-KYPCEFPMRSKCVLLFQEMDGVDVILFGMYLYEYGHKCPQPNNRRVYVSYLDSVYYFRPRENRTLVYHEMLIAYLAHAKERGFHTAHIWACPPCKGDDYIFFCHPEDQKTPKDDRLRLWYITLLRKARDEGVVTRITNLWDENFKSD--FNITQIPYFEGDYWPGEAENVAK 949          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14536.3275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT9_ECTSI7.130e-14199.51Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KPY4_9PHAE1.700e-13597.57Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
A0A835Z331_9STRA4.760e-9669.65Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A835YGT9_9STRA1.180e-9571.78Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A7S3K383_9STRA3.310e-9164.85Histone acetyltransferase n=1 Tax=Aureoumbra lagun... [more]
F0YI83_AURAN4.890e-9164.85Histone acetyltransferase n=1 Tax=Aureococcus anop... [more]
A0A7R9YAI7_9STRA6.650e-9067.31Histone acetyltransferase (Fragment) n=1 Tax=Pingu... [more]
A0A6S8EDF0_9STRA7.460e-8864.85Histone acetyltransferase n=2 Tax=Aureoumbra lagun... [more]
A0A7S2W4U4_9STRA1.760e-8762.25Histone acetyltransferase (Fragment) n=1 Tax=Rhizo... [more]
A0A8J2ST16_9STRA5.830e-8461.27Histone acetyltransferase n=1 Tax=Pelagomonas calc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14536contigE-fasciculatus_F_contig14536:598..2630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.4
Seed ortholog evalue2.4e-121
Seed eggNOG ortholog2880.D8LPT9
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1778@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size657
Cds size657
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14536.3275.1prot_E-fasciculatus_F_contig14536.3275.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14536 598..2630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927938.718503-CDS-E-fasciculatus_F_contig14536:597..7721622927938.718503-CDS-E-fasciculatus_F_contig14536:597..772Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 598..772 -
1695995759.112556-CDS-E-fasciculatus_F_contig14536:597..7721695995759.112556-CDS-E-fasciculatus_F_contig14536:597..772Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 598..772 -
1622927938.729463-CDS-E-fasciculatus_F_contig14536:1173..13471622927938.729463-CDS-E-fasciculatus_F_contig14536:1173..1347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 1174..1347 -
1695995759.1326833-CDS-E-fasciculatus_F_contig14536:1173..13471695995759.1326833-CDS-E-fasciculatus_F_contig14536:1173..1347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 1174..1347 -
1622927938.7414198-CDS-E-fasciculatus_F_contig14536:1866..20161622927938.7414198-CDS-E-fasciculatus_F_contig14536:1866..2016Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 1867..2016 -
1695995759.15471-CDS-E-fasciculatus_F_contig14536:1866..20161695995759.15471-CDS-E-fasciculatus_F_contig14536:1866..2016Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 1867..2016 -
1622927938.7524066-CDS-E-fasciculatus_F_contig14536:2472..26301622927938.7524066-CDS-E-fasciculatus_F_contig14536:2472..2630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 2473..2630 -
1695995759.1724334-CDS-E-fasciculatus_F_contig14536:2472..26301695995759.1724334-CDS-E-fasciculatus_F_contig14536:2472..2630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14536 2473..2630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14536.3275.1

>prot_E-fasciculatus_F_contig14536.3275.1 ID=prot_E-fasciculatus_F_contig14536.3275.1|Name=mRNA_E-fasciculatus_F_contig14536.3275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp
VAFSFRSKQVTKANTLYIREVSVMDTVHLVKPGFHRRYGPAGEYPADFPV
RSKCIVLFQELDGVDVLLFGMYVYEYGHTCPAPNQRRVYISYLDSVHYFR
PRNYRTMVYHEILIAYLEEVKTRGFHTAHIWACPPAKGDDYILYCHPAEQ
QTPKDDRLQQWYVTMLEEAKKRGIVEGLTNLFDEYWSNPETADARQLPYL
EGDYWIGEAENIIKVGIN*
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mRNA from alignment at E-fasciculatus_F_contig14536:598..2630-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14536.3275.1 ID=mRNA_E-fasciculatus_F_contig14536.3275.1|Name=mRNA_E-fasciculatus_F_contig14536.3275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2033bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14536:598..2630- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTGCGTTTTCCTTCCGTTCCAAACAGGTGACCAAGGCGAACACTTTGTA CATCCGCGAGGTGTCGGTGATGGACACGGTCCACCTCGTCAAGCCGGGTT TCCACCGGCGGTACGGCCCTGCCGGGGAGTACCCGGCAGATTTCCCGGTC CGAAGCAAGTGAGTTTGACAGCAGCAGCAGCAGCAATTAAAAAAGGGCGT GTCAGGCACATAACTGCACTCTCAGGTTAACTTCAACTCTATTATAGCGA CTGGGATGAATATTTGTACCCTCCACCCCCAGTAAAAGTAAAGACATTGT TGCTGTACGCACTATGGGCAAGTACCGAACTCTAGCGAAAGGGGGTAGCT TTGTACCCTTCCTCCCCAGTAAAATATATTACTATTCGTTGTTCTGTTGC ATCGTAAGTAGTAGTGTGGCATCGATTATTTTGGAAGGCAAGAGGGCGTG TGTTACTAGTTCGACCCGTAGTTGTTATTTATCCCCCCCCTTGGGGTTCT TGCTGTCTTGTTTTTGAACCATGTACACTGCACCATGTTGCTCTCTATTT ATTTTTTCTGCTGTTGTTTGGTTTTTTCTCACCTCACCACACACCCCGCC AATCAATCGCGCAGGTGCATTGTGCTGTTCCAGGAGCTGGATGGGGTGGA CGTCCTCCTGTTCGGGATGTACGTGTACGAGTACGGCCACACGTGCCCAG CGCCGAACCAGCGAAGGGTGTACATCAGCTACCTGGACTCTGTTCACTAC TTCCGTCCGAGGAAGTGAGAACAAACAATATTGGGAGAGAGAGATGAGGG GCAGAGAGAGGAGTGCTGCTGTGCAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGACAGAAGGCAGTGCCTGCTGCTGTGCAGTGTTTTGTAT GCAGATCTATATCTGAATAGCCACCGCTGACAGTGCTGTGTTGGTGTTGT TCTGTGTCATAAAGTGATGGAGGGATGGAGGGAGAAGTGAGGCGCGTGCG GCTACACCACTGCTGCTGTATAATGATAATGCACTCGCGAGAACTCGCTC TGTCGAACGGGCGTGTTTGCTGCCTGCGTCCAAACAAGAGAGACCAGACG ATGGCGTAACCTGACCGTTTTACCGTTGTCTTCAATGTCTTTACTCTCAG TTCTCTCGTTTTTCCCCCCTCTCCCCCAAAGCTACCGGACGATCGTGTAT CACGAGGTCGTGAAGCCCCTGTCTATACCCATGTCTTTAACCTCTTTTCC CTCGTTTCTCCCCCCCCCCCGAACGACCGGAAGTTATCGAACGATGGTGT ACCACGAGATCCTGATCGCCTACCTGGAGGAGGTGAAGACGAGAGGGTTC CACACGGCGCACATCTGGGCGTGTCCCCCCGCCAAGGGAGACGACTACAT CCTCTACTGCCACCCGGCGGAGCAGCAGACCCCCAAGGATGATCGCCTCC AGCAATGGTGAGCAGGAGGGGTGGAGTGGACGGGCTGAAGTGGTGTCGCG AGTTGGGAGCGGAATAGGAGGGCGAGAGAATGTTGTGTGTGTGTGTTTGG GGTGTTGCGGGTTGAGCTATGGATGGATGTAAGGGATGGTGTGTGTGTTT TTTTGTGCTTTCACGGAGCTTTCTGTCTGACGTCTTGCTTTGTGGGGTTG ACAACCCCGATTGACGACCGCTCGCCACCGGGCGCCAGACCGATACACTT ACAGGCATCGCTTGAGTGTGTCAAAACCATCACAGGCAAGAAGCGTCAAC AAACATCACTCGAACGTAGTGTTTCATCTCTTGTGTTATGTTGTTGTCCT GTCCTGTCCTGTCCTGTCCTGTCCTGTCCTCTCCTCTCCTCTACCGTCTT GTCGAAAGGTATGTTACGATGCTCGAGGAGGCGAAGAAGAGGGGCATCGT GGAGGGGCTCACCAACCTCTTCGACGAGTACTGGTCCAACCCAGAAACGG CGGACGCACGCCAGCTGCCGTACCTCGAGGGCGACTACTGGATAGGGGAG GCAGAGAACATCATCAAGGTAGGAATTAATTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14536:598..2630-

>mRNA_E-fasciculatus_F_contig14536.3275.1 ID=mRNA_E-fasciculatus_F_contig14536.3275.1|Name=mRNA_E-fasciculatus_F_contig14536.3275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14536:598..2630- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTGCGTTTTCCTTCCGTTCCAAACAGGTGACCAAGGCGAACACTTTGTA
CATCCGCGAGGTGTCGGTGATGGACACGGTCCACCTCGTCAAGCCGGGTT
TCCACCGGCGGTACGGCCCTGCCGGGGAGTACCCGGCAGATTTCCCGGTC
CGAAGCAAGTTGCGTTTTCCTTCCGTTCCAAACAGGTGACCAAGGCGAAC
ACTTTGTACATCCGCGAGGTGTCGGTGATGGACACGGTCCACCTCGTCAA
GCCGGGTTTCCACCGGCGGTACGGCCCTGCCGGGGAGTACCCGGCAGATT
TCCCGGTCCGAAGCAAGTGCATTGTGCTGTTCCAGGAGCTGGATGGGGTG
GACGTCCTCCTGTTCGGGATGTACGTGTACGAGTACGGCCACACGTGCCC
AGCGCCGAACCAGCGAAGGGTGTACATCAGCTACCTGGACTCTGTTCACT
ACTTCCGTCCGAGGAAGTGCATTGTGCTGTTCCAGGAGCTGGATGGGGTG
GACGTCCTCCTGTTCGGGATGTACGTGTACGAGTACGGCCACACGTGCCC
AGCGCCGAACCAGCGAAGGGTGTACATCAGCTACCTGGACTCTGTTCACT
ACTTCCGTCCGAGGAATTATCGAACGATGGTGTACCACGAGATCCTGATC
GCCTACCTGGAGGAGGTGAAGACGAGAGGGTTCCACACGGCGCACATCTG
GGCGTGTCCCCCCGCCAAGGGAGACGACTACATCCTCTACTGCCACCCGG
CGGAGCAGCAGACCCCCAAGGATGATCGCCTCCAGCAATGTTATCGAACG
ATGGTGTACCACGAGATCCTGATCGCCTACCTGGAGGAGGTGAAGACGAG
AGGGTTCCACACGGCGCACATCTGGGCGTGTCCCCCCGCCAAGGGAGACG
ACTACATCCTCTACTGCCACCCGGCGGAGCAGCAGACCCCCAAGGATGAT
CGCCTCCAGCAATGGTATGTTACGATGCTCGAGGAGGCGAAGAAGAGGGG
CATCGTGGAGGGGCTCACCAACCTCTTCGACGAGTACTGGTCCAACCCAG
AAACGGCGGACGCACGCCAGCTGCCGTACCTCGAGGGCGACTACTGGATA
GGGGAGGCAGAGAACATCATCAAGGTAGGAATTAATTGAGTATGTTACGA
TGCTCGAGGAGGCGAAGAAGAGGGGCATCGTGGAGGGGCTCACCAACCTC
TTCGACGAGTACTGGTCCAACCCAGAAACGGCGGACGCACGCCAGCTGCC
GTACCTCGAGGGCGACTACTGGATAGGGGAGGCAGAGAACATCATCAAGG
TAGGAATTAATTGA
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