mRNA_E-fasciculatus_F_contig14526.3269.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: D7FRP1_ECTSI (PAP2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP1_ECTSI) HSP 1 Score: 463 bits (1191), Expect = 2.440e-162 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 1
Query: 1 ATYVHTPADPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGSSNTAAAVKAGYDPRTEKKNAPWVV 684
ATYVHTPA+PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGS NTAAAVKA YDPRTEKKNAPWVV
Sbjct: 172 ATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGSGNTAAAVKAAYDPRTEKKNAPWVV 399
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE) HSP 1 Score: 248 bits (632), Expect = 3.080e-73 Identity = 111/195 (56.92%), Postives = 146/195 (74.87%), Query Frame = 1
Query: 1 ATYVHTPADPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRG--HATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENG 579
+T VH P PLFD+GF ++P Q +DSPWRP+SD LT LPG+A LR+LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC + Y+PP WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y KA G +YLLTM T IAGRKHYTVD+ L +++A LTFFRF++G
Sbjct: 341 STMVHQPRLPLFDVGFYLVPAQGVDSPWRPLSDILTLALPGLAFLRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSEYDPPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYAFVKAAGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQDG 535
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI) HSP 1 Score: 215 bits (547), Expect = 2.280e-67 Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 64 QTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRG--HATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFE 573
Q +DSPWRP+SD LT LPG+A R+LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC + Y+ P WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y + K+ G +YLLTM T IAGRKHYTVD+ L +++A LTFFRF+
Sbjct: 30 QGVDSPWRPLSDILTLALPGLAFFRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSGYDRPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYALVKSTGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQ 201
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: K3X811_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X811_GLOUD) HSP 1 Score: 219 bits (558), Expect = 6.470e-66 Identity = 99/198 (50.00%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 1 ATYVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRD-KALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATY--RVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
A Y+H P+D PL D+GF+++P Q +DSPWRPVSD LTA++P +A++++ FM R R +++++FR+ ++ Y LR LT+ LTSLPGPAPHCR LY PP +W +I TR+G M G+F+SCGDL+FSGH A+T +L+++++ H ++ LG V+LLT+ TL ++GRKHY+VD+ LGI++++L FF FE+GW
Sbjct: 182 AFYLHAPSDTPLRDLGFMLVPAQAVDSPWRPVSDVLTAVMPVVAMVQTYFMTRANRCRVISTFFRVATVSYALRMLTVSLTSLPGPAPHCRPGSGLYFPPQTWIDIVTRVGPMYGNFNSCGDLIFSGHMAYTNSALLLYLRTMDQHFVRFSKLRWTLGAVFLLTLATLCVSGRKHYSVDVMLGIMISTLVFFHFEHGW 379
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A5D6XG27_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG27_9STRA) HSP 1 Score: 213 bits (542), Expect = 8.910e-64 Identity = 106/199 (53.27%), Postives = 143/199 (71.86%), Query Frame = 1
Query: 1 ATYVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCR-DKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHA---TYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
A Y+H P+ PL D+GFL IPEQ +DS WRP+SD LTA +P + LL+SL M R+ RVT+++++FR ++ Y LR LTI LTSLPGPAPHCR A Y PP +W +I TR+G M G+++SCGDL+FSGH A+T +L++++ HA + W ALG YLL + L IAGRKHYTVD+ LG+L+++L FF FE+ W
Sbjct: 132 AFYLHVPSSTPLPDLGFLFIPEQAVDSKWRPLSDVLTAGVPVVFLLQSLAMTRENRVTVISTFFRCATVCYFLRGLTIALTSLPGPAPHCRVGSATYFPPQNWIDIVTRVGPMYGNYNSCGDLIFSGHMAYTNSAVLLYLRVLDRHAPRFSALRW-ALGAAYLLLLAALCIAGRKHYTVDVVLGLLISALVFFHFEHSW 329
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A662Y930_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y930_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.350e-63 Identity = 99/200 (49.50%), Postives = 144/200 (72.00%), Query Frame = 1
Query: 1 ATYVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
A Y+H P PL D+GF++IPEQ +DS WRPVSD LTA +P I +L++LFM R R +++S+FRL ++ Y LR LT+ +TSLPGPAPHCR + Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + GH ++ A G+ YL+ + L IAGRKHYTVD+ LG+++A+L FF FE+ W
Sbjct: 156 AFYLHVPTTTPLKDLGFMLIPEQAIDSKWRPVSDLLTAGVPVIFMLQTLFMTRANRCRIISSFFRLATVCYFLRMLTVSVTSLPGPAPHCRAGSPDYYPPTTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFPGHTASKIRWACGMSYLVVLSVLCIAGRKHYTVDVVLGLMIATLVFFHFEHSW 355
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A5D6Y3E4_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3E4_9STRA) HSP 1 Score: 211 bits (537), Expect = 5.230e-63 Identity = 102/198 (51.52%), Postives = 142/198 (71.72%), Query Frame = 1
Query: 1 ATYVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRD-KALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSW-RGHATY-RVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
A Y+H PA PL D+GF+++PEQ LDS WRP+SD LTA++P + LL++LFM R R ++ ++FR+ S+ Y LR LT+ LTSLPGPAPHCR ALY PP +W +I TR+G M G F+SCGDL+FSGH A+T +L+++++ R A + R+ G +LL + L +AGRKHYTVD+ LG++V+SL +F FE W
Sbjct: 145 AFYLHAPAAAPLRDLGFMLVPEQALDSKWRPLSDVLTAVVPVLGLLQTLFMTRANRCRVIATFFRVASVSYALRLLTVSLTSLPGPAPHCRPGSALYAPPQTWIDIVTRVGPMYGQFNSCGDLIFSGHMAYTNSALLLYLRTMDRYFARFSRLRWLAGTAFLLALALLCVAGRKHYTVDVVLGVVVSSLVYFHFEYSW 342
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A484EEP4_BRELC (PAP2_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEP4_BRELC) HSP 1 Score: 209 bits (533), Expect = 1.570e-62 Identity = 100/199 (50.25%), Postives = 144/199 (72.36%), Query Frame = 1
Query: 7 YVHTPA-DPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWR 585
++H PA PL D+GF++IPEQTL S WRPVSD LTA LP I LL+++ M R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR L Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + G + ++ A GV YL+ + L IAGRKHYTVD+ LG++++++ FF FE+ WR
Sbjct: 152 FLHVPAATPLKDLGFMLIPEQTLHSKWRPVSDILTAGLPVIFLLQTIVMSRPSRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGNLDYFPPATWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFSGSMSSKIRWACGVAYLIILAVLCIAGRKHYTVDVVLGVIISTMVFFLFEHSWR 350
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A0P1APX3_PLAHL (Transmembrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APX3_PLAHL) HSP 1 Score: 207 bits (527), Expect = 3.540e-62 Identity = 101/198 (51.01%), Postives = 142/198 (71.72%), Query Frame = 1
Query: 7 YVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
Y+H PA PL D+GF++IPEQ L S WRPVSD LTA +P I LL++ M R R +V+S+FR+V+I Y LR LT+ +TSLPGPAPHCR + Y PP SW +IATR+G + G+++SCGDL+FSGH A+T +L+++++ + G ++ A G+ YL+ + L IAGRKHYTVD+ LG++V++L FF FE+ W
Sbjct: 104 YLHVPATTPLKDLGFMIIPEQKLHSKWRPVSDILTAGMPVIFLLQTAVMTRPNRCRVVSSFFRIVTICYFLRMLTVSVTSLPGPAPHCRVGSHDYFPPTSWIDIATRVGPIYGNYNSCGDLIFSGHMAYTVSAVLLYLRTLDRNFPGRMASKIRWACGLTYLIILAVLCIAGRKHYTVDVVLGLIVSTLVFFHFEHSW 301
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Match: A0A6A3DVY3_9STRA (PAP2_C domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DVY3_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.550e-60 Identity = 97/200 (48.50%), Postives = 143/200 (71.50%), Query Frame = 1
Query: 1 ATYVHTPAD-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 582
A Y+H PA PL D+GF++IPEQ L S WRPVSD LTA +P + LL+++FM R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR + Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + G ++ A G+ +L+ + L IAGRKHYTVD+ LG+++++L FF FE+ W
Sbjct: 155 AFYLHVPATTPLKDLGFMLIPEQGLHSKWRPVSDILTAGVPVVFLLQTIFMTRPNRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGSPDYFPPQTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFAGRTASKIRWACGMTHLMVLAALCIAGRKHYTVDVVLGLIISTLVFFHFEHSW 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14526.3269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14526.3269.1 >prot_E-fasciculatus_F_contig14526.3269.1 ID=prot_E-fasciculatus_F_contig14526.3269.1|Name=mRNA_E-fasciculatus_F_contig14526.3269.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=229bp ATYVHTPADPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMback to top mRNA from alignment at E-fasciculatus_F_contig14526:2..1413+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14526.3269.1 ID=mRNA_E-fasciculatus_F_contig14526.3269.1|Name=mRNA_E-fasciculatus_F_contig14526.3269.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1412bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14526:2..1413+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14526:2..1413+ >mRNA_E-fasciculatus_F_contig14526.3269.1 ID=mRNA_E-fasciculatus_F_contig14526.3269.1|Name=mRNA_E-fasciculatus_F_contig14526.3269.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14526:2..1413+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |