mRNA_E-fasciculatus_F_contig14515.3263.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A6H5KVD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVD5_9PHAE) HSP 1 Score: 367 bits (941), Expect = 2.700e-123 Identity = 189/195 (96.92%), Postives = 194/195 (99.49%), Query Frame = 1
Query: 1 TQEEKAADMRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
++EEKAADMRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAAR+LPLK ALEGYFPKAGM+SGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLAST+WSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG
Sbjct: 234 SKEEKAADMRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 428
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A835YPB8_9STRA (LrgB-like family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB8_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.750e-55 Identity = 104/195 (53.33%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 1 TQEEKAADMRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
T+EEK R+AW VITAA++ + P+ PA STTV +LL NALP K ++HPLV CS++T + LG + L AL YF K G+ GGAGD FFG+L+A CCALG RM+ +R L N PLLAS++ ++ SLFGT AA GA +TP+L+ TL QRSVMSSLGI A+ +LGGN +AVASIL+TG
Sbjct: 248 TKEEK---FREAWGVITAASFVIAPFYSSSPAMFSTTVAALLKGNALPARTKAVVHPLVTCSVVTAVVAAVLGRSEGLTTSGALAAYFTKRGIACGGAGDAFFGLLSACCCALGVRMYVSRRTLFDNAAPLLASSLLAASLSLFGTTAACGAARVTPKLTFTLAQRSVMSSLGISASQILGGNAGMAVASILLTG 439
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A7S2UXS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS0_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.060e-51 Identity = 98/195 (50.26%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 13 KAAD----MRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
KAAD +R+AW+V+TA +Y LLP PA +T+L+LL ALPP + ++LHPL+ +T G + LGA + K +L+ YF G G+GD FF +L+ SC ALG RMFY R+ L +NL LL ST +SSM SLFGTAAAAGA+G+ +L++ LTQRSV + LG+ A LG +PAL VASIL+TG
Sbjct: 79 KAADTQQRLRRAWSVLTAISYVLLPVAGRQPATFCSTILTLLWGKALPPKISQVLHPLITAGALTSGVTTSLGALDAMSQKDSLQEYFRNTGFTGMGSGDAFFSLLSCSCTALGLRMFYARNTLQENLPTLLGSTAFSSMLSLFGTAAAAGALGMDDKLALMLTQRSVSTPLGLAGARDLGASPALTVASILITG 273
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A7S4D6V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V3_HETAK) HSP 1 Score: 176 bits (445), Expect = 3.750e-51 Identity = 99/186 (53.23%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 31 KAWAVITAATYALLPW-CEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
+AW +TA + +LP + PA +TTVLSL+ +LP GV K+LHPLV C IT A+ LG + + AL+ YF G+ + G GDLFFG+LNASCCALG RMF +R L NL L+ +T +SSM SLFGT AG GL ++S+ L+QRSVMSSLGI A LLG +PAL VASILVTG
Sbjct: 30 RAWRAVTAFAFLVLPTRAGKNPALFATTVLSLVGGQSLPKGVTKVLHPLVTCGAITSIAAIALGRLEGMDREKALQDYFRNQGLGNLGPGDLFFGLLNASCCALGVRMFNSRRTLEANLPTLVGATAFSSMLSLFGTTWVAGRAGLPEKVSLMLSQRSVMSSLGIGGAQLLGASPALTVASILVTG 215
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A7S2RL00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL00_9STRA) HSP 1 Score: 132 bits (331), Expect = 9.270e-33 Identity = 79/187 (42.25%), Postives = 110/187 (58.82%), Query Frame = 1
Query: 37 WAVITAATYALLPWCEEGPAAVSTTVLSLLHAN----ALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
W I AA Y L PA +TT+ +++ A +LP V + HPLVV +++TG + + A +P + + Y G + GGAGD ++N + ALG RMF R IL +N +PL A ++ SLFGTAAAAG L P L + L+QRSVMS+LG+ A++LG +P LAVASIL+TG
Sbjct: 205 WVKIAAAAYMLQSTVGRKPAFAATTITAIIAAQKANPSLPKPVGSVAHPLVVAAIVTGVSLFLSAKAHGIPPEQLFDEYMNGKGPIGGGAGDAVAALMNGAVSALGIRMFQARAILEENWQPLAAGASAVALVSLFGTAAAAGYSELPPPLGLALSQRSVMSALGMAGANMLGASPNLAVASILLTG 391
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: M8AG30_TRIUA (Uncharacterized protein ywbG n=2 Tax=Triticum TaxID=4564 RepID=M8AG30_TRIUA) HSP 1 Score: 85.5 bits (210), Expect = 5.920e-16 Identity = 50/168 (29.76%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 91 PAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLL-GGNPALAVASILVTGEV 591
P +++TVL + + LPPG+KK+LHP++ C+L ++ G + AAL Y K + GAGD+ G L + + F MF R ++ ++ + S +S SL+ TA +GL P L++++ R + +L + S G N +L A +++TG +
Sbjct: 225 PFMLASTVLGYMVGSGLPPGIKKLLHPIICCALSANLSAVAYGYLSGSGIDAALGDYLTKVPS-NPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSIAIASTFSLYSTAILGRLIGLEPTLTISILPRCITVALALSIVSFFEGANTSLTAAVVVLTGLI 391
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A7S3SVR1_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SVR1_EMIHU) HSP 1 Score: 82.8 bits (203), Expect = 1.780e-15 Identity = 50/170 (29.41%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 76 WCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
W + +T + + +P +K+LHPL+ C+L T A L A P L Y G G+L +L + + GF M+ R +L+ +L + A+T ++ LFG+AAAA A+GL L R V + L I + L+G +P +A +++TG
Sbjct: 49 WLRDASLLTTTAGGFVAGSTLVPKRAQKLLHPLLTCTLCTHAAVAALALATAQPFSVLLRSYLLPGGAPLAAPGNLLLAMLGPATLSFGFSMYEKRRLLAASLPAVTAATAVAAAGGLFGSAAAARALGLDAALRAAAIPRQVTAPLAIAISGLVGADPGIACTIVVLTG 218
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 5.710e-15 Identity = 51/180 (28.33%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 64 ALLPWCEEGPAAVSTTVLSLLHANA---LPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGM-LSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGEV 591
ALL + A +S + +L +A +P V K +HP+V+CS + G + +G L L Y ++ + GAGD+ G+L S + +M+ R+++ ++ + + A +V+ + + LFGTA + +GL L + R++ S L + SL+G +P+LA+A +++TG +
Sbjct: 267 ALLTKLSKPAAQLSLLLATLFGFSAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLRSYLTRSRCPVHLGAGDVLLGLLGPSVLSFAVQMYRRRNLIFEDAKQVAAGSVFCASSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLIGADPSLAIAIVVLTGVI 446
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A5M8PQJ8_9LECA (Uncharacterized protein n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A5M8PQJ8_9LECA) HSP 1 Score: 80.1 bits (196), Expect = 5.600e-14 Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 91 PAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKA----------GMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
PA ++ VL+ A ALP K++LHP+++ S+IT + L R+ L L Y K G+ GAGD+F VL+ S AL MF R+ L ++ ++ + S+ SLFG A A+G++ + S++ RS+ +L P+A+ LGG+ L +++G
Sbjct: 290 PAQLALNVLAYFAALALPGNYKRVLHPVLLSSVITIMGIWMLALCRHDDLHHGLHAYSTKTRYLQIWNGDKGLQRPGAGDVFSSVLDVSIVALALPMFQYRNELRRHFLSIIIPNISVSIASLFGYPALCYAIGISSQRSLSFAARSLTLALATPSATNLGGDLNLVAVLCIMSG 464
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Match: A0A165EG11_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165EG11_9BASI) HSP 1 Score: 77.8 bits (190), Expect = 1.680e-13 Identity = 53/178 (29.78%), Postives = 92/178 (51.69%), Query Frame = 1
Query: 91 PAAVSTTVLSLLHANAL-PPGVKKILHPLVVCSLITGGASYGLGAARNLPLKAALEGYFPKAGML------------SGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTVWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 585
P ++ VL+ L + L PP V++ LHP++ CS++T A +GLGA+R ++ +L Y + L GAGD+ + VL+AS +L M+ R L ++ + ++T+ ++ S+F A+ L+P + RSV + + IP + L G+P L V ++TG
Sbjct: 40 PLFLALNVLAFLFSVLLVPPKVRRFLHPIITCSVLTVLAIWGLGASRGWGIQQSLGKYSTGSRYLVLFDPSRTGHVAPPGAGDVLYSVLDASIVSLAVPMYRYRGELKRHAFEMFSTTIPLAVLSMFIYPLVGRAIQLSPSRGLAFAARSVTTPMAIPMEATLQGDPGLTVVLCILTG 217 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14515.3263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14515.3263.1 >prot_E-fasciculatus_F_contig14515.3263.1 ID=prot_E-fasciculatus_F_contig14515.3263.1|Name=mRNA_E-fasciculatus_F_contig14515.3263.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=193bp MRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLback to top mRNA from alignment at E-fasciculatus_F_contig14515:137..3254- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14515.3263.1 ID=mRNA_E-fasciculatus_F_contig14515.3263.1|Name=mRNA_E-fasciculatus_F_contig14515.3263.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3118bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14515:137..3254- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14515:137..3254- >mRNA_E-fasciculatus_F_contig14515.3263.1 ID=mRNA_E-fasciculatus_F_contig14515.3263.1|Name=mRNA_E-fasciculatus_F_contig14515.3263.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1158bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14515:137..3254- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |