mRNA_E-fasciculatus_F_contig1451.3261.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1451.3261.1 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI) HSP 1 Score: 3220 bits (8349), Expect = 0.000e+0 Identity = 1985/2631 (75.45%), Postives = 2064/2631 (78.45%), Query Frame = 1
Query: 1 RGGPGGGAGGGARDSGEVGHLPTTKEGVVMGRGGGAGERGAEEQQGRKGDAGQQTEEAGNDDGGCAA----PATRHCATCEALPVVQIDDDGDKEEDGDVDGSPAEGGGGQGGTAGSRGRGGSVHEGDLSANEQMHGLLEKVLEDTQNVSVPWAITSSDLIPPSIYLVAPAPEPGSSSGVGRSTNHWSNXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXVPGLAPPTLKGASGPLPSELAMRGRWFSRTIGDGAILLTFLPALDVWRKEVSARLERRRALREARKAKARKWKKSGRKDHGRGVA-SGKGGDEDEDDSLGLFLFLVRSGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARRIGWGDDPGGGRVGTLARSYQGLVNLEHRRAFLRVVYAALREGRVLCSGDLAFALSGCGETTREVNITRLQRIVLDNGTAEGAPRAAPADAAQQAEPDKAACDVEFTSILSRYLRPVPGTVYYIYWDSEDEGWSAANIQQASSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ANQSLQGRSSSLSAVADXXXXXXXXXXXXXXXXXXSSPLFVRFEVVHDETVCADGPG-DAAAMAXXXXXXXXXXXXXXEQDGRGDDGGVDGTPGSLPCGVWHQQRRRHRSRGCVVDTSHTLSRALKSATDVARAGQAVGKFDGAGACADGEGLGGAQSHLCILATTLPAADWSRSASGGAEAGAGGDGHSPVKQPQQQ-----QTTARFGQYRRPRTLSTGDLVMVHGGGG-LRIGGGSGGSGTTMSINPSLSRLTEALREYMDKIYCAEVLRSLLRRTPVTMPTLLTVRRCLRPVPAEEITRFLVPLELMVDISTEAHSANIGQRGLNSIADARELLDQELLRGKAPCFRRAKEEXXXXXXXX-EAGHEAPTKTASDSLRQDIEAARGLLFVVEEGVRAGAEGAAPPLHGRQAGGGVSLXXXXXXXXXXXLRSGASADGRRKGATRTDYGVDENVRDGGDSSRHPAEANDDYSVPYWGIVRVGELTNDPGEEPLPWPLYGASRARTRQLGKTAHAFSKPSEPTPASQVHRFGSAPDSVGYRLVVINVKVSVHHPRGSAVASNKGAVIEGIKRGLHVAARRVNQLMLLKSLVSTKVACEVLIPPPRPPATATTAPDMPEVLRVGAVTYNNPLARRPKANASTSGAGASLGSVXXXXXXXXXXSRGIDGKGVGGRAGLPLQSPPPAGTASPVASAAKGAGIVACDGAVGASSAFVVPDS--GTGGNSDRKKLSPGVDGIGLGGEGLLSKAPTWAGRPLTVDTRSVVRGVFHRENGLDAANKGSGSPCSSPTRLVLDSGGGESGRVVDGRTISFTHGGSGDRQXXXXXXXXXXXXEGGFGLPKRELGQAFREGELRCECKYSRRFPLYHRLQAHMVLATLATGKLDVLRVHGRSDMYVWPDEQGNFYMTLSESPRGDAASRRSRQEASSQSALELKVYGVEDVSMAMKQRLNDKIELELARQGWEALSSQLGMNDHLNVTAADWEFVRTGPNADQARDSGRGSRGGVGGRAVQQSTSRGSGSGGDEFVARAADEQTRHEKSHSDXXXXXXXXXXXXRGSFTAATTKVHKEDRGGKEGTSPASALPGHDRAWFSLPAGGVLDTFLLLQYLRSVLCADGLMKILHSATNESQQPQSPQLEQPRQQSQLIPPTPPPRLDVSYKGRGHRRRSTGSSPLARAYSQGGLGSGSGSASVGGGRAGGGSWDGAAAEGSETSAAAEAVVTTPVH--ITLAGGVAVPSGGNDSGHGPRGSDAVGGLHNRADSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----KEAGGSSPDEQGSVTLGTRESKDRSKVDLARSGSGEGGREDGAGGNKAG---PDKGLVEDVEVDPNDLNFVYSSRQATTGVRRGDPAAKRTAEAARKVGEGLAFVKLWPLDPKTGARTPTLRTGFRPSPISELASRTSATGGGMDIEILAGEDGLAAVAKAXXXXXXXXXXXXXXXXRPSPVPASVRASSPPSSLSXXXXXXXXX-----DGAGLGGAPPAAVGGSDVGSGAGESSLRQSSSVVDDKAVDDISIEAMPETMATAEARRAASGEKNEATAAVAAAAAAPRWLALEVEVFAVGGISVPYMMFLITVCFEQALAEYMMERLLLRDRTGPSRGLPRSAAAAESKKDESTELTGXXXXXXXXXXXXXXXXGKKGNAVDEGPPVRHRTPKDVKSMCTIVGRLADKAAGGTSPVTQQIVANESIPGWAVPTFAADLTQAICHQHSSFFTSTTAVNLSKMGERPKTAILSSFAPPRPGNSNSTDDPGEYIIVLGLEFDGAPKTHVREDLEDAFIHAGGARAEPGTAGAEGEREPAVAGG-AXXXXXXXXXXXXXXXXGSLHNRPMSSFALDPPHLKRQRPLLGIASGSSGSXXXXXXXXXXXXXXXXXXXXXXSGGRAGLSCWQQKVRQRGMFCVISVSTTKQWLTTYNFNPSFFEMCRGAMASAITWA 7788
RGGPG GGARDSGEVG LPTTKEGVVMGRG GAGE+GAEEQQGRK DAG+Q E NDDGGC PA RHCATCEALPVVQID++GD +DGD GSPA G GGQG RGR GSVHEGDLSANEQMHGLLEKVLEDTQNVSVPWAITSSDLIPPSIYLVA + GSSSG+ S H XXXXXXXXXVPGLAPPTLKGASGPLPSELAMRGRWFSRTIGDGAILLTFLPALD WRKEVSARLE+RRALREARK RKWKKSGRK GRG A +GKGG+EDEDDSLGLFLFLVRSGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARRIGWGDDPGGGRVGTLARSYQGLVNLEHRRAFLRVVYAALREGR+LCSGDLAFALSGCGET+REVNITRL+R+VLDNGTAEGAPRA PADAAQQAEPDKAACDVEFTSILSRYLRPVPGTVYYIYW+SEDEGW AANI QASSASXXXXXXXXXXXXXXXXXXXX ANQSLQGRSSSLSAVAD XXXXXXXXXX S PLFVRFEVVHDETVC DGP DAAAMA E DGR G D PGS G W QQ RRHRSRGCVVD SH LSRALKS +VARA QAVG+FDGAGACAD EGLGGAQSHLCILATT PA+DWSRSAS GAE QT ARFGQ RRPRTLSTGDL MVHGGGG LRIGGGS GSGTTM I PSL+RLTEALRE++DKIYC+EVLRSLLRRTPVTMPTL+TVRRCLRPVPAEEITRFLVPLE MVDISTE HSANIG RGL SIA+ARELLDQELLRGKAPCFRRAKEEXXXXXXXX E G EAPTK SDSLRQDIEAA+GLLFVVEE VRAG EGAAPPLHG QAG GVS R ASADGRR GATRTD GVD+N +GGDSSRHPAEANDDYSVPYWGIVRVGELTNDPGEEP PWPLYGASRARTRQLGKTAHAFSKPSEP PASQV SVHHPRGS V++NKG VI+GIKRGLH+AARRVNQLMLL+SL+ T+VACEVLIPPPRPPAT TTAPDMPEVLRVG VTY+NP ARRPKANA T GAGA LG V SR ID KGVG R GL +QSPPPAGTASPVASAAK AG+VA DGAVG SSAFV P+S GTGG+SDRKKLSP VDGIG GGEGLLSKA TWAG LTVDTRSVVRGVF REN LDAANKGSGSPCSSPT+LVLD GGGESGRVVDGR + TH XXXXXXXXXXXX GG LP+RELGQAFREGEL+CECKYSRRFPLYHRLQA MVL TLAT LD LRVHGRSD+YV PD+ GNFYMTLSESPR DAASR SRQEASSQ +ELKVYG+ED+S +K+RLNDKIE +LA+QGWEALSSQLGMNDHLNVTAADWEFVRTGPNAD ARDSG SRGGV GR VQQ+TSRGSGSGG+EFVARAADEQTR EKSHSD +GSFTAATTKVHKEDRGGKEG +PAS LPGH RAWFSLPAGGVLDTFLLLQYLRSVLCADGLMKILHSATNESQ PQSPQLE+PRQQSQLIP PPPRLDVSYKGRGHRRRSTGSSPLARAYSQG GS SGSASVGGGRAG SWDGAAAEG ETSAAAEAVVT VH ITLAGGVAVPSGGNDSGHGP G DAVGGL++RA SGS XXXXXXXXXXXXXXX KEAG SP EQGSVTLG + KDR+K +L RSGSGEG REDGAGG+ AG PD+GLVEDVEVDPNDLNFVYSSRQATTGVRRGDPAAKRTAEAARKVGEGLAFVKLWPLD KTGARTP+LRTGFRPSPISE+ASRTSATGGGMDIEILAG DGLAAVAKA XXXXXXXXXX R SPVPASVRASSPPSSLS DGAGL A AAV G DVGSGAGESS RQ+SSVV D A D+I IEAMPE AT EA RAA+GEK EAT AA PRWLALEVEVFAVGGI+VPYMMFLITVCFEQALAEYMMERLLLRDRTGPSRGLP+SA AAESKK+ESTE TG GKKGNA+DEGPPVRHRTPKDVKS+CTIVGRLADKAAGGTSPVTQQIVANESIPGWAVPTFAADLTQAICHQHSSFFTSTTA+NLSKMGERPKTAILSSFAP RPGNSNSTDDPG+YIIVLGLEFDGAPKTHVREDLEDAFI AGGARAE G GAEGERE A AGG + GSLHNRPMSSFALDPPHLKRQRPLLGIASG SGS XXXXXXXXXXXXXXXXX SGGRAGLSCWQQKVRQRGMFCVISVSTTKQWLTTYNFNPSFFE+CRGAMAS+ITWA
Sbjct: 573 RGGPGXXXXGGARDSGEVGQLPTTKEGVVMGRGVGAGEKGAEEQQGRKDDAGRQRETVENDDGGCXXXXXXPAARHCATCEALPVVQIDNNGDN-KDGDGAGSPAVGDGGQGXXXXXRGRAGSVHEGDLSANEQMHGLLEKVLEDTQNVSVPWAITSSDLIPPSIYLVANSSS-GSSSGIAASR-------------------VGGGRSGGHCNAGPASPPTXXXXXXXXXVPGLAPPTLKGASGPLPSELAMRGRWFSRTIGDGAILLTFLPALDEWRKEVSARLEQRRALREARKT--RKWKKSGRKGPGRGGACAGKGGNEDEDDSLGLFLFLVRSGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARRIGWGDDPGGGRVGTLARSYQGLVNLEHRRAFLRVVYAALREGRMLCSGDLAFALSGCGETSREVNITRLRRVVLDNGTAEGAPRADPADAAQQAEPDKAACDVEFTSILSRYLRPVPGTVYYIYWESEDEGWGAANIPQASSASXXXXXXXXXXXXXXXXXXXXSVTETSLRTTAVAAGHHWSGQVADNVAAALVPTYRGGSPHDNNSSTSTSTCANQSLQGRSSSLSAVADPETVXXXXXXXXXXTSSASFPLFVRFEVVHDETVCVDGPDEDAAAMATIAAAATSGDGDENEHDGRVHVGN-DAAPGSFHYGAWQQQPRRHRSRGCVVDASHALSRALKSMPNVARAEQAVGRFDGAGACADCEGLGGAQSHLCILATTFPASDWSRSASSGAEXXXXXXXXXXXXXXXXXXXXXXQTGARFGQCRRPRTLSTGDLAMVHGGGGGLRIGGGSSGSGTTMPIIPSLARLTEALREHIDKIYCSEVLRSLLRRTPVTMPTLMTVRRCLRPVPAEEITRFLVPLEFMVDISTEPHSANIGPRGLRSIANARELLDQELLRGKAPCFRRAKEEXXXXXXXXGEGGQEAPTKAVSDSLRQDIEAAKGLLFVVEERVRAGDEGAAPPLHGCQAGDGVSSPPPPP-------RIDASADGRRNGATRTDVGVDDNAHNGGDSSRHPAEANDDYSVPYWGIVRVGELTNDPGEEPEPWPLYGASRARTRQLGKTAHAFSKPSEPMPASQV---------------------SVHHPRGSTVSANKGTVIDGIKRGLHLAARRVNQLMLLESLIQTRVACEVLIPPPRPPATTTTAPDMPEVLRVGGVTYSNPRARRPKANALTGGAGAPLGGVGGG-------SRSIDDKGVGERGGLLMQSPPPAGTASPVASAAKDAGVVARDGAVGTSSAFVAPESAAGTGGSSDRKKLSPRVDGIGPGGEGLLSKASTWAGCSLTVDTRSVVRGVFRRENSLDAANKGSGSPCSSPTQLVLDGGGGESGRVVDGRATNSTH-------XXXXXXXXXXXXXGGLVLPQRELGQAFREGELQCECKYSRRFPLYHRLQAQMVLVTLATTALDGLRVHGRSDLYVCPDQLGNFYMTLSESPRRDAASRGSRQEASSQPVIELKVYGIEDLSTELKRRLNDKIEFKLAKQGWEALSSQLGMNDHLNVTAADWEFVRTGPNADLARDSGGVSRGGVTGR-VQQATSRGSGSGGEEFVARAADEQTRQEKSHSDSSS---------KGSFTAATTKVHKEDRGGKEGAAPAS-LPGHGRAWFSLPAGGVLDTFLLLQYLRSVLCADGLMKILHSATNESQPPQSPQLEKPRQQSQLIP--PPPRLDVSYKGRGHRRRSTGSSPLARAYSQGAPGSASGSASVGGGRAGVDSWDGAAAEGRETSAAAEAVVTAAVHEGITLAGGVAVPSGGNDSGHGPPGGDAVGGLYDRAGSGSSTDARRASAGVGAMAAAATTAAGADAGGPAARMRTVDDLDSSGKSERKARGGLSEGGSKLEYSSSSSGSSAVAKPHDEARAVTAXXXXXXXXXXXXXXXXXAKVKEAGRPSPGEQGSVTLGEIKGKDRNKANLERSGSGEGSREDGAGGSMAGATRPDEGLVEDVEVDPNDLNFVYSSRQATTGVRRGDPAAKRTAEAARKVGEGLAFVKLWPLDAKTGARTPSLRTGFRPSPISEVASRTSATGGGMDIEILAGADGLAAVAKAKAXXXXXXXXXXAPLERSSPVPASVRASSPPSSLSSPPGSPAEIVDTAPDGAGLE-AAAAAVSGRDVGSGAGESSSRQASSVVADNAADNIGIEAMPEAAATGEAGRAAAGEKKEAT------AATPRWLALEVEVFAVGGINVPYMMFLITVCFEQALAEYMMERLLLRDRTGPSRGLPQSAVAAESKKNESTEPTGGSGHKAAAVAAATA--GKKGNALDEGPPVRHRTPKDVKSVCTIVGRLADKAAGGTSPVTQQIVANESIPGWAVPTFAADLTQAICHQHSSFFTSTTAINLSKMGERPKTAILSSFAPGRPGNSNSTDDPGQYIIVLGLEFDGAPKTHVREDLEDAFIRAGGARAERGAVGAEGERERAAAGGPSTSTGAVGGVGGGVGSGGSLHNRPMSSFALDPPHLKRQRPLLGIASGCSGSGXXXXXXXXXXXXXXXXXREG-SGGRAGLSCWQQKVRQRGMFCVISVSTTKQWLTTYNFNPSFFEICRGAMASSITWA 3114 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1451.3261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1451.3261.1 >prot_E-fasciculatus_F_contig1451.3261.1 ID=prot_E-fasciculatus_F_contig1451.3261.1|Name=mRNA_E-fasciculatus_F_contig1451.3261.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=2692bp RGGPGGGAGGGARDSGEVGHLPTTKEGVVMGRGGGAGERGAEEQQGRKGDback to top mRNA from alignment at E-fasciculatus_F_contig1451:1..16115+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1451.3261.1 ID=mRNA_E-fasciculatus_F_contig1451.3261.1|Name=mRNA_E-fasciculatus_F_contig1451.3261.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=16115bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1451:1..16115+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1451:1..16115+ >mRNA_E-fasciculatus_F_contig1451.3261.1 ID=mRNA_E-fasciculatus_F_contig1451.3261.1|Name=mRNA_E-fasciculatus_F_contig1451.3261.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=16152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1451:1..16115+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |