mRNA_E-fasciculatus_F_contig14505.3258.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: D7FHR9_ECTSI (Oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR9_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 7.330e-21 Identity = 44/47 (93.62%), Postives = 47/47 (100.00%), Query Frame = 1
Query: 4 QAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEITA 144
+AFCKILEEGG+VTPSGEDGLAALKMAMACDKSLKEGRPV+LSEITA
Sbjct: 325 RAFCKILEEGGDVTPSGEDGLAALKMAMACDKSLKEGRPVNLSEITA 371
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A835Z516_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z516_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.270e-15 Identity = 34/45 (75.56%), Postives = 42/45 (93.33%), Query Frame = 1
Query: 4 QAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 138
+AFC+IL+ GGEV+PSG+DG AAL+MAMACDKSLKEGRPV +SE+
Sbjct: 326 KAFCEILKSGGEVSPSGDDGRAALEMAMACDKSLKEGRPVKISEV 370
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A835Z446_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z446_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 9.930e-12 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 4 QAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 138
+AFC+IL+ GG V+PSG+DG AAL+MAMACD SL+ GRPV +SE+
Sbjct: 343 KAFCEILKSGGAVSPSGDDGRAALEMAMACDMSLRLGRPVLMSEV 387
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A835Z9N2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.320e-11 Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 4 QAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 138
+AFC +L+ GGEV+PSG+DG AL+MAMACD SL+ GRPV +SE+
Sbjct: 312 KAFCALLKAGGEVSPSGDDGARALEMAMACDLSLRLGRPVLMSEV 356
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A4D9CRG6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG6_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 4.210e-7 Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 7 AFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPV 123
AFC+ L+EG +PSG DG AL +AMACDKS KE RPV
Sbjct: 327 AFCQTLQEGKAPSPSGHDGKMALVLAMACDKSFKEKRPV 365
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A6J4UVP2_9DEIN (Myo-inositol 2-dehydrogenase n=1 Tax=uncultured Truepera sp. TaxID=543023 RepID=A0A6J4UVP2_9DEIN) HSP 1 Score: 50.8 bits (120), Expect = 5.150e-6 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEIT 141
+QAF + EG TP ED + AL++A+A KSLKE RPV +SEIT
Sbjct: 290 VQAFVDSVREGRTPTPGAEDAVEALRVALAATKSLKEKRPVEVSEIT 336
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: UPI001F01390B (inositol 2-dehydrogenase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F01390B) HSP 1 Score: 50.1 bits (118), Expect = 9.680e-6 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 1 LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 138
+ + K L+ G EV SG DGL +LK+ +A KSLKE RPV LSEI
Sbjct: 289 MSDYIKSLKNGTEVPASGNDGLQSLKIGLAAIKSLKENRPVKLSEI 334
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: UPI000D30ECA5 (oxidoreductase n=1 Tax=Desmospora activa TaxID=500615 RepID=UPI000D30ECA5) HSP 1 Score: 45.4 bits (106), Expect = 3.300e-5 Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 1 LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 138
++AF + + + EV +G DGL A +A A ++SLKEGRPV +SE+
Sbjct: 1 MRAFIQSITDNQEVLANGNDGLQAELIAHAANRSLKEGRPVKISEV 46
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A7W8KCJ5_9DEIO (Myo-inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase n=2 Tax=Deinococcus TaxID=1298 RepID=A0A7W8KCJ5_9DEIO) HSP 1 Score: 48.5 bits (114), Expect = 3.400e-5 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 1 LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEITA 144
+ AF L EG TP D + +L++A+AC +SLKEGRPV + ++ A
Sbjct: 297 IAAFVLALREGRAPTPGAHDAVESLRLALACTRSLKEGRPVRVQDVQA 344
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Match: A0A0F5FW00_9HYPH (Inositol 2-dehydrogenase n=1 Tax=Devosia geojensis TaxID=443610 RepID=A0A0F5FW00_9HYPH) HSP 1 Score: 48.1 bits (113), Expect = 4.640e-5 Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 1 LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSE 135
++AF +E + TPSG+DGLAAL +A A KS+KEGR V +SE
Sbjct: 287 IKAFIDAVESKSKPTPSGQDGLAALVLAEAALKSVKEGRAVKVSE 331 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14505.3258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14505.3258.1 >prot_E-fasciculatus_F_contig14505.3258.1 ID=prot_E-fasciculatus_F_contig14505.3258.1|Name=mRNA_E-fasciculatus_F_contig14505.3258.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=49bp LQAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEITA*back to top mRNA from alignment at E-fasciculatus_F_contig14505:3134..3280- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14505.3258.1 ID=mRNA_E-fasciculatus_F_contig14505.3258.1|Name=mRNA_E-fasciculatus_F_contig14505.3258.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=147bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14505:3134..3280- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14505:3134..3280- >mRNA_E-fasciculatus_F_contig14505.3258.1 ID=mRNA_E-fasciculatus_F_contig14505.3258.1|Name=mRNA_E-fasciculatus_F_contig14505.3258.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=294bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14505:3134..3280- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |