mRNA_E-fasciculatus_F_contig14503.3257.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14503.3257.1
Unique NamemRNA_E-fasciculatus_F_contig14503.3257.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 4.480e-124
Identity = 185/189 (97.88%), Postives = 189/189 (100.00%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHH 567
            QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQS+DAGSAGVGPGRIQQAFVFSLKED+TEYYRLIAVLGAQLNLE+EGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHV+HGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHH
Sbjct:  257 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVDHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHH 445
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: A0A1S3J7J9_LINUN (Gamma-tubulin complex component n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J7J9_LINUN)

HSP 1 Score: 154 bits (389), Expect = 5.710e-40
Identity = 82/188 (43.62%), Postives = 118/188 (62.77%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAE-GVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID Q IK+    +GY +D +  +    R  VT++ E GWL+T + +Y    DA S+    G + Q+F  +L +++TEYYRLIAVL AQL  E + GVG+G GG   LTL++L VW  DP+ RL  +A LV      KGGALA+ +H+++ HGDPF+R LV+ T+    + +F +V  W+ +GEL D
Sbjct:  254 QGIDGQLIKWDINNAGYRIDDKAGIARAVRQKVTKLAECGWLYTKIRKY---ADARSSDKAFGLVGQSFCAALHQELTEYYRLIAVLEAQLQQEHDQGVGMGPGG---LTLRQLSVWTFDPLSRLKALAALVDVCKGKKGGALATVIHSYLQHGDPFMRALVKHTLTLVAQPIFGIVLRWLHDGELED 435
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: D8TC06_SELML (Gamma-tubulin complex component n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TC06_SELML)

HSP 1 Score: 150 bits (379), Expect = 1.210e-38
Identity = 76/191 (39.79%), Postives = 120/191 (62.83%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEG---LTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID +Y+++ +E  GY++D  LR+    R +V  + E+GWLF  V  + +++++  +  V  G + QA   +L+E+++EYYRL+AVL AQL+ +   + VG  G      L+L+RL+VW+ +P+ R+ +MA LV     L+GGA+A  +H H  HGDP VR  + R + R C  LF MV+ W+ EGE+ D
Sbjct:  211 QGIDGRYVRFDKEADGYIVDESLRIPRATRVLVRRLCEVGWLFKRVQGHISETLEQATMEV-IGTVGQALSSALQEELSEYYRLMAVLEAQLHNQIPFLAVGETGKSVGNYLSLRRLWVWLAEPLARMRLMAVLVDDCKCLRGGAMAGAIHAHAQHGDPLVRSFMSRLLRRVCSPLFEMVRRWVLEGEVDD 400
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: A0A4P1QV24_LUPAN (Gamma-tubulin complex component n=2 Tax=Lupinus TaxID=3869 RepID=A0A4P1QV24_LUPAN)

HSP 1 Score: 149 bits (376), Expect = 3.100e-38
Identity = 77/188 (40.96%), Postives = 114/188 (60.64%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QG+D  Y+K+  +  GYVL   +++    R MV ++ E+GWLF  V  + ++S+D  SA    G + QAF  +L++++TEYY+L+AVL AQ +     V   A     L+L+RL VW+ +PM ++ +MA LV     L+GGA+A  +H H  HGDP V   ++R + R C  LF MVK W+ EGEL D
Sbjct:  203 QGVDGSYVKFENDNVGYVLSDFVKVPRATRTMVHKLCELGWLFKKVTGFISRSMDRFSAE-DVGTVGQAFCSALQDELTEYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLSVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSPLFEMVKRWVLEGELED 389
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: C1EDY5_MICCC (Gamma-tubulin complex component (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EDY5_MICCC)

HSP 1 Score: 148 bits (373), Expect = 7.470e-38
Identity = 80/196 (40.82%), Postives = 112/196 (57.14%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLN------LEAEGVGVG---AGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID ++I+Y  + + YV+DP   +    R +  ++ E+GWLF  V      +D    G   G ++QAF  +++ ++ +YYRLIAVL AQ        LEA   G G   AGG   LTL+RL VW+ +P++RL ++A LV AAA  +GGAL   LH H  HGDP  R  V+R +  A E    MV+ W+  GEL D
Sbjct:  168 QGIDGRHIRYNPQMASYVVDPAAPVRPGARDLARKLTELGWLFRRVRAALGGVDEAGLGGDGGSVRQAFRAAVQAELADYYRLIAVLEAQAQVPMASALEAPTTGTGGGTAGGGTYLTLRRLSVWLAEPLRRLRLLAVLVDAAADARGGALLRALHEHAKHGDPATRATVERLLAAAAEPALRMVRAWVVAGELED 363
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: A0A165YCB0_DAUCS (Gamma-tubulin complex component n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165YCB0_DAUCS)

HSP 1 Score: 148 bits (373), Expect = 8.020e-38
Identity = 75/187 (40.11%), Postives = 106/187 (56.68%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID +Y+K+ +   GYVL   +R+    R MV ++ E+GWLF  V  Y        A    G + QAF  +L++++TEYY+L+AVL AQ       +         L+L+RL VW  +PM ++ +MA LV     LKGGA+A  +H H  HGDP V   ++R + R C  LF MV+ W+ EGEL D
Sbjct:  225 QGIDGKYVKFDKSVDGYVLAESVRVPRATRIMVRKVCELGWLFRKVKGYVSETVQSLAAEDVGTVGQAFCAALQDELTEYYKLLAVLEAQSMNPIPSITESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVDNCKVLKGGAMAGAIHMHAQHGDPIVHDFMKRLLRRVCSPLFEMVRSWVLEGELED 411
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: UPI000A2A9037 (gamma-tubulin complex component 3 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9037)

HSP 1 Score: 148 bits (373), Expect = 8.340e-38
Identity = 76/190 (40.00%), Postives = 114/190 (60.00%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHHK 570
            QGI+ + IK  +    Y +D  L +    R +V ++ E+GWL+  V +Y   +DA +     G + Q+F  +L++++TEYYRL+AVL  Q  L  +G+G GA G   LTL+RL VW  DP+ RL  +ATLV      KGGAL S LHT++ HGDPFV+ LV+  +      +  ++  W++EGEL D ++
Sbjct:  270 QGIEGKVIKLDDSSDAYRIDANLGVPKSVRDLVNKLAELGWLYRKVRKY---LDARAGDRALGLVGQSFCAALQQELTEYYRLMAVLEGQQQLNDQGIGEGASGN--LTLRRLMVWTFDPLVRLRTLATLVDTCKGKKGGALLSALHTYMQHGDPFVKSLVKHILNLVAHPIRTIMDRWIYEGELEDQYQ 454
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: A0A6P3ZG56_ZIZJJ (Gamma-tubulin complex component n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZG56_ZIZJJ)

HSP 1 Score: 145 bits (367), Expect = 1.770e-37
Identity = 74/187 (39.57%), Postives = 106/187 (56.68%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID  Y+K+  +  GYVL   +++    R MV ++ E+GWLF  V  Y     A       G + QAF  +L+++++EYY+L+AVL AQ       V      +  L+L+RL VW  +PM ++ +MA LV     LKGGA+A  +H H  HGDP V   ++R + R C  LF MV+ W+ EGEL D
Sbjct:  205 QGIDGNYVKFDAKSDGYVLLDSIKVPRATRIMVCKLCELGWLFRKVKGYISESMARFPAEDVGTVGQAFCAALQDELSEYYKLLAVLEAQSMNPIPLVSDSVNSSNYLSLRRLSVWFAEPMLKMRLMAVLVEKCGVLKGGAMAGAIHLHAQHGDPLVHEFMRRLLRRVCSPLFEMVRSWVLEGELED 391
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: A0A6I9SXN9_SESIN (Gamma-tubulin complex component n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SXN9_SESIN)

HSP 1 Score: 147 bits (370), Expect = 2.120e-37
Identity = 75/188 (39.89%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID +Y+K+ E+   YVL   +++    R MV ++ E+GWLF  V  Y  +S+D   A    G + QAF  +L++++++YY+L+AVL AQ       V   A     L+L+RL VW  +P+ ++ +MA LV +   LKGGA+A  +H H  HGDP V   ++R++ R C  LF MV+ W+ EGEL D
Sbjct:  272 QGIDGKYVKFDEKADAYVLPELIKVPRATRIMVRKLCELGWLFRKVKAYITESLDRFPAE-DVGTVGQAFCAALQDELSDYYKLLAVLEAQAMNPIPLVSENASSGNYLSLRRLSVWFSEPLVKMRLMAVLVDSCKVLKGGAMAGAIHMHAQHGDPLVNDFMKRSLRRVCSPLFEMVRTWVLEGELED 458
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BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Match: UPI000B8CCDB2 (LOW QUALITY PROTEIN: gamma-tubulin complex component 3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CCDB2)

HSP 1 Score: 145 bits (367), Expect = 2.470e-37
Identity = 75/188 (39.89%), Postives = 112/188 (59.57%), Query Frame = 1 
Query:    1 QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVNHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVD 561
            QGID +Y+++     GY L   L++    R MV ++ E+GWLF  V  Y ++S+D   A    G + QAF  +L+++++EYY+L+AVL AQ       V V A  +  L+L+RL VW  +PM ++ +MA LV     L+GG++A  +H H  HGDP V   ++R + R C  LF MV+ W+ EGEL D
Sbjct:  202 QGIDGKYVRFDTTVDGYALSDLLKVPRATRIMVRKLCELGWLFRKVKGYISESMDRFPAE-DVGTVGQAFCAALQDELSEYYKLLAVLEAQAMSPIPLVSVSASSSNYLSLRRLSVWFAEPMVKMRLMAVLVDKCRVLRGGSMAGAIHLHAQHGDPLVHEFMRRLLCRVCSPLFEMVRSWVLEGELED 388
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14503.3257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W1_ECTSI4.480e-12497.88Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A1S3J7J9_LINUN5.710e-4043.62Gamma-tubulin complex component n=2 Tax=Lingula un... [more]
D8TC06_SELML1.210e-3839.79Gamma-tubulin complex component n=2 Tax=Selaginell... [more]
A0A4P1QV24_LUPAN3.100e-3840.96Gamma-tubulin complex component n=2 Tax=Lupinus Ta... [more]
C1EDY5_MICCC7.470e-3840.82Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
A0A165YCB0_DAUCS8.020e-3840.11Gamma-tubulin complex component n=1 Tax=Daucus car... [more]
UPI000A2A90378.340e-3840.00gamma-tubulin complex component 3 homolog n=1 Tax=... [more]
A0A6P3ZG56_ZIZJJ1.770e-3739.57Gamma-tubulin complex component n=1 Tax=Ziziphus j... [more]
A0A6I9SXN9_SESIN2.120e-3739.89Gamma-tubulin complex component n=1 Tax=Sesamum in... [more]
UPI000B8CCDB22.470e-3739.89LOW QUALITY PROTEIN: gamma-tubulin complex compone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14503contigE-fasciculatus_F_contig14503:870..2598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue9.8e-103
Seed eggNOG ortholog2880.D7G6W1
Preferred nameTUBGCP3
KEGG koko:K16570
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000922,GO:0000923,GO:0000928,GO:0000930,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005816,GO:0005819,GO:0005822,GO:0005824,GO:0005825,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005886,GO:0005938,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007140,GO:0007163,GO:0007276,GO:0007338,GO:0008017,GO:0008092,GO:0008150,GO:0008275,GO:0008360,GO:0009566,GO:0009605,GO:0009607,GO:0009624,GO:0009898,GO:0009987,GO:0010638,GO:0010968,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030863,GO:0030981,GO:0031023,GO:0031109,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031334,GO:0031967,GO:0031975,GO:0032153,GO:0032155,GO:0032271,GO:0032273,GO:0032501,GO:0032504,GO:0032886,GO:0032991,GO:0033043,GO:0034622,GO:0043015,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044459,GO:0044464,GO:0044703,GO:0044732,GO:0046785,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051225,GO:0051258,GO:0051298,GO:0051321,GO:0051415,GO:0051418,GO:0051493,GO:0051495,GO:0051704,GO:0051707,GO:0055028,GO:0061496,GO:0061497,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070925,GO:0071840,GO:0071944,GO:0071957,GO:0071963,GO:0090063,GO:0090307,GO:0097435,GO:0098552,GO:0098562,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0140013,GO:0140014,GO:1902850,GO:1902903,GO:1902905,GO:1903046,GO:1903047
EggNOG free text desc.microtubule nucleation by interphase microtubule organizing center
EggNOG OGsKOG2000@1,KOG2000@2759
Ec32 ortholog descriptiongamma tubulin ring complex protein
Ec32 orthologEc-01_012030.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons3
Model size573
Cds size573
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14503.3257.1prot_E-fasciculatus_F_contig14503.3257.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14503 870..2598 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927935.6569889-CDS-E-fasciculatus_F_contig14503:869..10321622927935.6569889-CDS-E-fasciculatus_F_contig14503:869..1032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 870..1032 +
1695995757.8747551-CDS-E-fasciculatus_F_contig14503:869..10321695995757.8747551-CDS-E-fasciculatus_F_contig14503:869..1032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 870..1032 +
1622927935.674146-CDS-E-fasciculatus_F_contig14503:1643..18941622927935.674146-CDS-E-fasciculatus_F_contig14503:1643..1894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 1644..1894 +
1695995757.8885043-CDS-E-fasciculatus_F_contig14503:1643..18941695995757.8885043-CDS-E-fasciculatus_F_contig14503:1643..1894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 1644..1894 +
1622927935.6882648-CDS-E-fasciculatus_F_contig14503:2439..25981622927935.6882648-CDS-E-fasciculatus_F_contig14503:2439..2598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 2440..2598 +
1695995757.8994892-CDS-E-fasciculatus_F_contig14503:2439..25981695995757.8994892-CDS-E-fasciculatus_F_contig14503:2439..2598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14503 2440..2598 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14503.3257.1

>prot_E-fasciculatus_F_contig14503.3257.1 ID=prot_E-fasciculatus_F_contig14503.3257.1|Name=mRNA_E-fasciculatus_F_contig14503.3257.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp
QGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYN
QSIDAGSAGVGPGRIQQAFVFSLKEDMTEYYRLIAVLGAQLNLEAEGVGV
GAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHV
NHGDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHHK*
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mRNA from alignment at E-fasciculatus_F_contig14503:870..2598+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14503.3257.1 ID=mRNA_E-fasciculatus_F_contig14503.3257.1|Name=mRNA_E-fasciculatus_F_contig14503.3257.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1729bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14503:870..2598+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGGCATCGACAGCCAATACATCAAGTACTGCGAAGAGGAGTCTGGGTA
CGTGCTTGACCCGCGGCTACGGCTAGGTTTGAAGCAAAGGGCGATGGTAA
CGGAGATGTTGGAGATGGGCTGGCTGTTCACGACGGTGGTGCGATATAAC
CAGAGCATCGATGGTGAGATGGTGAGGGGGACATGGGCTCGTTACCACTT
TCCTCGCTCCGCTGACATTGTACATATTCCCCGTCACCTAACAGAAACAG
AAGTGCAAGTGAATGTCATGTCATGCCATGTTGTTCTGGAATTCTGTCGT
AAGTTCGTTGTCAGTTATTGTCGCAATTAAGTGACTACCGTAGTAGACAA
CGGTAGATACGATCTTTGTTGCCAGTTGTTGTAGCCCAGTCCGTGGATCA
TTATAACGAAACACTAGCCAGCAGCGGTTGTGCGTTTGTTGCACCATTTC
GCGTCCTTTGCACCGTTGCAGATAGATGCATTGGTGCACCCATGCTCCGG
GAAAGATAGAACCGGGAATGTTTTTTTCCTCTTCTTCCTCTCGCCACCAT
CACCTGCGCTGGGTAGTTGCTGGGACACCGTAGTTCAGAACTGAGACAAA
TTGCACATTCTCAGCAGCACGCGCATAGATAGCTGAGTATTGCCACCAAG
CAAAACCCACACTTCGTCCTCACGCTTGCATCACTAACCTCTAACCTCTG
AATTGATCGCCCATGTGTCGCTGACATATCCTCTGCCGCCCAACCTTGCT
GTACTACGCCGCGGTCTGGCCCAGCTGGCTCGGCGGGCGTCGGTCCTGGT
CGTATCCAGCAGGCTTTCGTGTTCTCTCTAAAGGAAGACATGACGGAGTA
CTACCGCCTCATCGCCGTGCTGGGGGCACAGCTGAATCTCGAGGCGGAGG
GGGTGGGGGTCGGGGCTGGCGGGACGGAGGGCTTGACGCTGCAGCGGCTG
TTCGTGTGGGTGAAGGATCCGATGAAGCGGCTCAACGTCATGGCGACTCT
TGTGGCCGCGGCAGCACAGCTTAAGGTCGAGACATGACATGACATGCTTG
TGTGTACCCAGGCGTGCCCGCCTAGGCATGACCGTTGGAACGTATTGTGA
GGTTCGAACGCAATGGTTGGAGGGGTTTGAGAGCGAAGGCGAACCCAGTA
CAGTAGATAGCAGCGCTTGATTGCGGCAATTTCGCACAATCGAATGACCA
TATCCCACATCTTGAAGCCTGCCGCAGTACCAGTAGTAGCGACAATCCAT
CCCTGTAACCAGCATGACAACATGTATAATAGTGCAGTTGTGTTTGTGTT
GGCACGGTCTTCGCCTCCCGAAACATGGGATGTCACGTCACGTCACGTCA
CCACACCTCTTTCCCTCTCTGTCTCAGCGCGGCGGTTACATTGGCTCTCT
CGTATGCACCTCTGGTGTAAACCCACCGCCTCCTCGGCGTCGACCCCCGA
TACACCAGACACCAAAGCACAACCCCTACCCCCTCTACTTTAATACATGT
ACCAGCACCCCAGGATTGCTCTCCGGCACGCACCCAACCCGCCGCCTCCG
CTCTTGTGCCCTACAAACAGGGAGGAGCCTTGGCCTCGTGCCTGCACACA
CACGTAAACCACGGCGACCCGTTCGTAAGAGGGCTGGTGCAGCGCACGAT
GGTCCGCGCCTGCGAGTCTCTGTTCTTGATGGTGAAGCTGTGGATGTTCG
AGGGGGAGCTGGTGGACCACCACAAGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14503:870..2598+

>mRNA_E-fasciculatus_F_contig14503.3257.1 ID=mRNA_E-fasciculatus_F_contig14503.3257.1|Name=mRNA_E-fasciculatus_F_contig14503.3257.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14503:870..2598+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGGCATCGACAGCCAATACATCAAGTACTGCGAAGAGGAGTCTGGGTA
CGTGCTTGACCCGCGGCTACGGCTAGGTTTGAAGCAAAGGGCGATGGTAA
CGGAGATGTTGGAGATGGGCTGGCTGTTCACGACGGTGGTGCGATATAAC
CAGAGCATCGATGCAGGGCATCGACAGCCAATACATCAAGTACTGCGAAG
AGGAGTCTGGGTACGTGCTTGACCCGCGGCTACGGCTAGGTTTGAAGCAA
AGGGCGATGGTAACGGAGATGTTGGAGATGGGCTGGCTGTTCACGACGGT
GGTGCGATATAACCAGAGCATCGATGCTGGCTCGGCGGGCGTCGGTCCTG
GTCGTATCCAGCAGGCTTTCGTGTTCTCTCTAAAGGAAGACATGACGGAG
TACTACCGCCTCATCGCCGTGCTGGGGGCACAGCTGAATCTCGAGGCGGA
GGGGGTGGGGGTCGGGGCTGGCGGGACGGAGGGCTTGACGCTGCAGCGGC
TGTTCGTGTGGGTGAAGGATCCGATGAAGCGGCTCAACGTCATGGCGACT
CTTGTGGCCGCGGCAGCACAGCTTAAGCTGGCTCGGCGGGCGTCGGTCCT
GGTCGTATCCAGCAGGCTTTCGTGTTCTCTCTAAAGGAAGACATGACGGA
GTACTACCGCCTCATCGCCGTGCTGGGGGCACAGCTGAATCTCGAGGCGG
AGGGGGTGGGGGTCGGGGCTGGCGGGACGGAGGGCTTGACGCTGCAGCGG
CTGTTCGTGTGGGTGAAGGATCCGATGAAGCGGCTCAACGTCATGGCGAC
TCTTGTGGCCGCGGCAGCACAGCTTAAGGGAGGAGCCTTGGCCTCGTGCC
TGCACACACACGTAAACCACGGCGACCCGTTCGTAAGAGGGCTGGTGCAG
CGCACGATGGTCCGCGCCTGCGAGTCTCTGTTCTTGATGGTGAAGCTGTG
GATGTTCGAGGGGGAGCTGGTGGACCACCACAAGTGAGGAGGAGCCTTGG
CCTCGTGCCTGCACACACACGTAAACCACGGCGACCCGTTCGTAAGAGGG
CTGGTGCAGCGCACGATGGTCCGCGCCTGCGAGTCTCTGTTCTTGATGGT
GAAGCTGTGGATGTTCGAGGGGGAGCTGGTGGACCACCACAAGTGA
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