prot_E-fasciculatus_F_contig1450.3255.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1450.3255.1
Unique Nameprot_E-fasciculatus_F_contig1450.3255.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length365
Homology
BLAST of mRNA_E-fasciculatus_F_contig1450.3255.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 9.640e-127
Identity = 214/297 (72.05%), Postives = 223/297 (75.08%), Query Frame = 0
Query:    1 RCEDWPCDDVSTNLEGSCYNDDNFGRRRLSSSSSTFLGECSDNTCCQLIDYTCDSFVDAESGASLCPSGYDAISLGESVXXXXXXXXXXXXXXXXXXXXXDWTCDDVSTNLEGSCYIDDNWERRRLSSSSSTFLGECSDDTCCQLIDYTCDSFVDAETGASLCPSRYRAIANGDSISCGVGVECDEATCCEEDVDEERCEDWACGDVSTNLEGSCY--NYNDDYGEGRRLSSSSSTLLGECSDDTCCQLIDYTCDSFVDAESGASLCPSGFSAIANGGSVSCGIGEECNEATCCDED 295
            RCEDW CDDVSTNLEGSCYN +   RR+LSSSSST LGECSD+TCCQLIDYTCDSFVDAESGASLCPSGY AIS GESV                     DW CDDVSTNLEGSC                T LGECSDDTCCQLIDYTCDSFV  E+GASLCPS YRAIAN +SISCGVGV CDEATCCEEDVDEERCEDW C DVSTNL GSCY   Y+D          SSS+ + ECSDDTCCQ IDYTCDSFVDA SGASLCPSGFSAIAN  SVSCGIGEEC+EATCCDED
Sbjct:   26 RCEDWQCDDVSTNLEGSCYNYNYDDRRKLSSSSSTSLGECSDDTCCQLIDYTCDSFVDAESGASLCPSGYVAISFGESVSCGIGVECDVTPCCEEEARCEDWPCDDVSTNLEGSCDXXXXXXXXXXXXXXXTSLGECSDDTCCQLIDYTCDSFVGTESGASLCPSGYRAIANSESISCGVGVACDEATCCEEDVDEERCEDWPCDDVSTNLGGSCYIYAYSDXXXXXXXXRLSSSSSMAECSDDTCCQPIDYTCDSFVDAASGASLCPSGFSAIANAESVSCGIGEECDEATCCDED 322          
BLAST of mRNA_E-fasciculatus_F_contig1450.3255.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.800e-30
Identity = 127/441 (28.80%), Postives = 159/441 (36.05%), Query Frame = 0
Query:    1 RCEDWPCDDVSTNLEGSCY----NDDNFGRRRLSSSSSTFLGECSDNTCCQLIDYTCDSFVDAESGASLCPSGYDAISLGESVXXXXXXXXXXXXXXXXXXXXXDWTCDDVSTNLEGSCYIDDNWERRRLSSSSSTFLGECSDDTCCQLIDYTCDSFVDAETGASLCPSRYRAIANGDSISCGVGVECDEATCCEEDVD-------------------------------------------------------------------------------------------------------------EERCEDWACGDVSTNLEGSCYNYNDDYGEGRRLSSSSSTLLGECSDDTCCQLIDYTCDSFVDAESGASLCPSGFSAIANGGSVSCGIGEECNEATCCDEDIPRPSPGPTXXXFAPPTPRPIFTEPPLTPAPTR 328
            RCEDWPCDDVSTNL GSCY    ND               + ECSD+TCCQ          D  +  + C S     S   ++                        CD         C++        +  S+ST           Q IDYTCDSFVDAE+GASLCPS + AIAN +++SCGVG ECDEATCC+ DV+                                                                                                                                              ++   T+  E           YTCDS+++ + G +LCP+G S +  GG V+CG+   C+++TCC ED P PSP P XXXF   TPRPIFTEPPLTPAPTR
Sbjct:   30 RCEDWPCDDVSTNLGGSCYIYAYNDXXXXXXXXXXXXXXXMAECSDDTCCQRERRVS---TDPNTATATCFSSSFGFSARRTLSSEPFFLMVRVTTPAAI-------CD---------CFLPRTTHLPNICGSAST-----------QAIDYTCDSFVDAESGASLCPSGFSAIANAENVSCGVGEECDEATCCKNDVELMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQPPTMAPE-----------YTCDSYLN-DLGDTLCPAGLSPV--GGEVTCGVDGGCDDSTCCVEDTPSPSPAPXXXXFVXXTPRPIFTEPPLTPAPTR 426          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1450.3255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLG6_ECTSI9.640e-12772.05Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JD90_9PHAE4.800e-3028.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1450contigE-fasciculatus_F_contig1450:6884..11063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1450.3255.1mRNA_E-fasciculatus_F_contig1450.3255.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1450 6884..11063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1450.3255.1 ID=prot_E-fasciculatus_F_contig1450.3255.1|Name=mRNA_E-fasciculatus_F_contig1450.3255.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=365bp
RCEDWPCDDVSTNLEGSCYNDDNFGRRRLSSSSSTFLGECSDNTCCQLID
YTCDSFVDAESGASLCPSGYDAISLGESVSCGVGAECDVATCCEDEARCE
DWTCDDVSTNLEGSCYIDDNWERRRLSSSSSTFLGECSDDTCCQLIDYTC
DSFVDAETGASLCPSRYRAIANGDSISCGVGVECDEATCCEEDVDEERCE
DWACGDVSTNLEGSCYNYNDDYGEGRRLSSSSSTLLGECSDDTCCQLIDY
TCDSFVDAESGASLCPSGFSAIANGGSVSCGIGEECNEATCCDEDIPRPS
PGPTPAPFAPPTPRPIFTEPPLTPAPTRDIPRPSPGPTPAPFAPPTPRPI
FTEPPLTPAPTRGE*
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