mRNA_E-fasciculatus_F_contig145.3254.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig145.3254.1 vs. uniprot
Match: D7FPW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW2_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 1.350e-182 Identity = 312/364 (85.71%), Postives = 330/364 (90.66%), Query Frame = 2
Query: 353 MGSSEVSQLCEMNAELSSSKENNDRTRQEISDIRLMIGLQEKRLENQVSLTNQHRSGKAAATAAAEKRVQGLFDLRLKMDHIAKQHNEVHQQRMKRAAAGVQQHQEGRATEVPHELRVELERLERSVAKEIETKKREE-LTRNLPATNLAKENEAAELTSRSEELDAEIRVQQEEQAAAETACTSSTALIQDLGRMKPEVLDQIKTSHQNYEKYVLEMKEVRAEIEEAERAENELVVVDGNQKKSFNSDIHAKEARLAQLSVEDTRLATVEEEQTESTQTTQALAEEMKEVTHESMQEDAKVLGMRALLQEKFQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHQALTSKTASIRQVGTRW 1441
MGSSEVSQLCEMNAELSSSKENNDRTRQEISDIR+MIGLQEKRLE+QVS+TN+HRSGKAAA AA EKRVQGLFDL LK+DHIAKQHNEVHQQRMKRAAAGVQQHQEGRATEVP ELRVELERLERSVAKEIETKKREE TR LPAT LAKENEAAELTSRSEELD EIRVQ+EEQ AAE A SS L QDL R+KPEVLDQI+TSHQN+E+ LEMKE RAE+EEAERA++EL VVDGNQ KS NSD HA+EARLAQL VED RL VEEEQ ES QTTQALAEEMK +THESMQ+D KVLGMRALLQEKFQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEH ALTSKT SIR+VGT+W
Sbjct: 1 MGSSEVSQLCEMNAELSSSKENNDRTRQEISDIRVMIGLQEKRLESQVSVTNRHRSGKAAAMAAVEKRVQGLFDLCLKVDHIAKQHNEVHQQRMKRAAAGVQQHQEGRATEVPRELRVELERLERSVAKEIETKKREEEQTRYLPATILAKENEAAELTSRSEELDVEIRVQREEQIAAEMAYNSSNTLFQDLRRVKPEVLDQIETSHQNHEQNALEMKEARAEVEEAERADHELAVVDGNQNKSLNSDKHAEEARLAQLEVEDNRLTAVEEEQAESAQTTQALAEEMKAITHESMQDDPKVLGMRALLQEKFQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHHALTSKTDSIRRVGTQW 364
BLAST of mRNA_E-fasciculatus_F_contig145.3254.1 vs. uniprot
Match: A0A6H5L7J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J4_9PHAE) HSP 1 Score: 199 bits (507), Expect = 2.030e-55 Identity = 124/188 (65.96%), Postives = 131/188 (69.68%), Query Frame = 2
Query: 353 MGSSEVSQLCEMNAELSSSKENNDRTRQEISDIRLMIGLQEKRLENQVSLTNQHRSGKAAATAAAEKRVQGLFDLRLKMDHIAKQHNEVHQQRMKRAAAGVQQHQEGRATEVPHELRVELERLERSVAKEIETKKREELTRNLPATNLAKENEAAELTSRSEELDAEIRVQQEEQAAAETACTSSTAL 916
MGSSEVSQLCEMNAELSS KENNDRTRQEISDIR+MIGLQEKRLE+QVS TN+HRSGKAAATAA EKR+Q LFDLRLK+DHIAKQHNE REE T NLPATNLAKENEAAELT RSEELD EIRVQ+EEQA AETACTSST +
Sbjct: 1 MGSSEVSQLCEMNAELSSCKENNDRTRQEISDIRVMIGLQEKRLESQVSATNRHRSGKAAATAAVEKRMQRLFDLRLKVDHIAKQHNE-----------------------------------------------REEQTTNLPATNLAKENEAAELTRRSEELDVEIRVQREEQATAETACTSSTTV 141
BLAST of mRNA_E-fasciculatus_F_contig145.3254.1 vs. uniprot
Match: A0A6H5L8B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B9_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.400e-53 Identity = 116/136 (85.29%), Postives = 122/136 (89.71%), Query Frame = 2
Query: 1262 MRALLQEKFQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHQALTSKTASIRQVGTRWTSAHASTEARKAAHEEEKRRVAEETAAEKASIGADISAEDNEHARVVAECKETSAAVADKELSVAGKKAEQASAEG 1669
MRALLQEK QKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHQALT KT +IR SAHASTEARKAAHEEEKRRVA+ETAAE+ SIGA+I AEDNEHARVVAEC ETSAAVA+KELSVAGK+AE ASAEG
Sbjct: 1 MRALLQEKLQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHQALTLKTDAIR-------SAHASTEARKAAHEEEKRRVAKETAAERVSIGAEILAEDNEHARVVAECNETSAAVANKELSVAGKRAEHASAEG 129 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig145.3254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig145.3254.1 >prot_E-fasciculatus_F_contig145.3254.1 ID=prot_E-fasciculatus_F_contig145.3254.1|Name=mRNA_E-fasciculatus_F_contig145.3254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=681bp MYIHSVGSVRNTFQDCSVAHNDGTTTKSTAPGNCVTQVTRRSQRTSNADTback to top mRNA from alignment at E-fasciculatus_F_contig145:16070..28496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig145.3254.1 ID=mRNA_E-fasciculatus_F_contig145.3254.1|Name=mRNA_E-fasciculatus_F_contig145.3254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12427bp|location=Sequence derived from alignment at E-fasciculatus_F_contig145:16070..28496- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig145:16070..28496- >mRNA_E-fasciculatus_F_contig145.3254.1 ID=mRNA_E-fasciculatus_F_contig145.3254.1|Name=mRNA_E-fasciculatus_F_contig145.3254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4086bp|location=Sequence derived from alignment at E-fasciculatus_F_contig145:16070..28496- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |