mRNA_E-fasciculatus_F_contig14497.3249.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: D8LHN2_ECTSI (D-lactate dehydrognease 2, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN2_ECTSI) HSP 1 Score: 357 bits (917), Expect = 4.890e-124 Identity = 188/204 (92.16%), Postives = 192/204 (94.12%), Query Frame = 1
Query: 1 MRFWSLRRARSQLQKST---GLFSSSSSYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEVR 603
MRF SLRRARS+L+KST GLF S YASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLP NT+ VSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMK VVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLE +
Sbjct: 1 MRFLSLRRARSRLRKSTSTTGLFGRS--YASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPSNTDQVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKSVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEKK 202
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A6H5K2K8_9PHAE (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K8_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.600e-115 Identity = 185/203 (91.13%), Postives = 188/203 (92.61%), Query Frame = 1
Query: 1 MRFWSLRRARSQLQKST---GLFSSSSSYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
+RF SLRRA SQL+KST GLF S YASVTDADLDFFRGVVGADHVKTS EDLESFNTDWMKKYRGASPAAVLP NT+ VSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMK VVSFDPL GVLTCEAGCILE LDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV
Sbjct: 8 IRFLSLRRACSQLRKSTNTAGLFGRS--YASVTDADLDFFRGVVGADHVKTSTEDLESFNTDWMKKYRGASPAAVLPSNTDQVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKSVVSFDPLTGVLTCEAGCILETLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 208
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A7S0QE84_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QE84_9CRYP) HSP 1 Score: 237 bits (604), Expect = 1.510e-74 Identity = 113/176 (64.20%), Postives = 144/176 (81.82%), Query Frame = 1
Query: 73 SYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
S+A++ D D+DFFR ++G V T +DLE+FN DWM+KYRG + A+ P T+ ++ +L++CNERR+AVVPQGGNTGLVGGSVP E+VLSTS + R++SFDP++GVL CEAGC+L+ LDA+L +GFAMPLDLGAKGSCQIGGN+STNAGGLRLLRYGSLHG+VLG+E
Sbjct: 65 SFATLEDRDVDFFRKILGNSGVITDVDDLENFNVDWMRKYRGHATVALRPRETDQIAAILKYCNERRLAVVPQGGNTGLVGGSVPVRD----EIVLSTSLLNRILSFDPVSGVLVCEAGCVLQALDAFLEARGFAMPLDLGAKGSCQIGGNVSTNAGGLRLLRYGSLHGTVLGIEA 236
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A7S0Y267_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y267_HEMAN) HSP 1 Score: 229 bits (585), Expect = 1.120e-72 Identity = 122/194 (62.89%), Postives = 146/194 (75.26%), Query Frame = 1
Query: 19 RRARSQLQKSTGLFSSSSSYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
RR+ S + +G+FS + + DL+FFR VVG V T ++LE+FN DWM+KYRG S A+ P T+ VS LLR+CNER +AVVPQGGNTGLVGGSV A EVVLSTS M ++ SF P +G L C+AGC+LE LD Y+ +QGFAMPLDLGAKGSCQIGGN++TNAGGLRLLRYGSLHGSVLGLEV
Sbjct: 7 RRSASTRVERSGVFSV------LEERDLEFFRSVVGDRGVVTDEDELEAFNVDWMRKYRGHSKVALKPKTTQQVSELLRYCNERMLAVVPQGGNTGLVGGSV----AVHDEVVLSTSLMNKIESFSPESGALVCQAGCVLEALDQYVEKQGFAMPLDLGAKGSCQIGGNVATNAGGLRLLRYGSLHGSVLGLEV 190
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A7S2Z6B2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z6B2_9CHLO) HSP 1 Score: 232 bits (592), Expect = 7.180e-71 Identity = 119/175 (68.00%), Postives = 136/175 (77.71%), Query Frame = 1
Query: 76 YASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
YA++T+ DLD FRG+VGA +V TS EDL N DWM KY GAS A+ P TE VSR+++HC+ER +AVVPQGGNTGLVGGSVP EVV+S +RM V S DPL+GVL C+AGCIL+NLD L E G MPLDLGAKGSC IGGNISTNAGG+R LRYGSLHGSVLGLEV
Sbjct: 88 YATLTEEDLDVFRGIVGAANVLTSEEDLAGHNRDWMGKYEGASKLALRPKTTEEVSRVMKHCHERGLAVVPQGGNTGLVGGSVPV----FDEVVVSMARMDAVRSIDPLSGVLICQAGCILQNLDDQLQEVGLVMPLDLGAKGSCHIGGNISTNAGGIRYLRYGSLHGSVLGLEV 258
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A2P6TGK5_CHLSO (D-2-hydroxyglutarate mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGK5_CHLSO) HSP 1 Score: 235 bits (599), Expect = 4.670e-70 Identity = 117/189 (61.90%), Postives = 143/189 (75.66%), Query Frame = 1
Query: 34 QLQKSTGLFSSSSSYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
QL+++ G+ +A+V DADL FF ++G V T P +L+ FN DWM KY GAS A+ P TE + LLRHCNERR+AVVPQGGNTGLVGGSVP E+V+ST+ M +V+ FD ++G LT +AGCILENLD Y+AE+G+ MPLDLGAKGSC IGGN++TNAGGLRLLRYGSLHGSVLGLE
Sbjct: 18 QLRRAGGVAERDPRFATVADADLQFFESMLGPAGVVTDPHELQPFNRDWMGKYEGASRVALKPKTTEQAAALLRHCNERRLAVVPQGGNTGLVGGSVPV----FDEIVISTAAMNQVLGFDQVSGALTAQAGCILENLDNYVAERGYCMPLDLGAKGSCHIGGNVATNAGGLRLLRYGSLHGSVLGLEA 202
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A6P8Y9H0_THRPL (D-2-hydroxyglutarate dehydrogenase, mitochondrial-like isoform X1 n=3 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Y9H0_THRPL) HSP 1 Score: 228 bits (581), Expect = 4.480e-69 Identity = 108/175 (61.71%), Postives = 136/175 (77.71%), Query Frame = 1
Query: 76 YASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
+AS+TD D++ F G+VG + T D+E++N DW+ RG+S + P TE VS +L+HCNERR+AV PQGGNTGL GGS P EVV+STS M +++SFD L+GVLTC+AGC+LE L++YL EQGF MPLDLGAKGSCQIGGN+STNAGGLRL+RYGSLHG+VLG+E
Sbjct: 43 FASLTDKDINVFEGIVGKTRMLTDVSDVEAYNVDWLHSVRGSSQCVLKPKTTEEVSAILKHCNERRLAVCPQGGNTGLAGGSNPV----FDEVVISTSLMNKIISFDSLSGVLTCQAGCVLEQLESYLLEQGFLMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGTVLGIEA 213
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: Q4LAW2_CAPCH (Putative FAD linked oxidase family protein (Fragment) n=1 Tax=Capsicum chinense TaxID=80379 RepID=Q4LAW2_CAPCH) HSP 1 Score: 220 bits (560), Expect = 6.880e-69 Identity = 107/177 (60.45%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 70 SSYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
S +++++ DL +F+ ++G V E L++ NTDWM+KY+G S + P E VS++L++CN R +AVVPQGGNTGLVGGSVPA EV++S S M +++SFD ++ VL CEAGCILENL +L QGF MPLDLGAKGSCQIGGN+STNAGGLRLLRYGSLHGSVLGLEV
Sbjct: 38 SDFSTISSEDLSYFKNILGERGVVQDEETLDAVNTDWMRKYKGTSKLMLQPRTAEEVSQILKYCNSRSLAVVPQGGNTGLVGGSVPA----FDEVIVSLSHMSKIISFDKVSSVLVCEAGCILENLITFLDNQGFIMPLDLGAKGSCQIGGNVSTNAGGLRLLRYGSLHGSVLGLEV 210
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A2P6V3S4_9CHLO (D-2-hydroxyglutarate mitochondrial isoform B n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3S4_9CHLO) HSP 1 Score: 237 bits (605), Expect = 1.100e-68 Identity = 119/175 (68.00%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 76 YASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
+A+V DADLDFFR V+G V T +L+ FN DWM KYRGAS A+ P +TE + +L HCNERR+AVVPQGGNTGLVGGSVP EVVLST+ M +V+SFDP++G LT +AGCILE LD ++AEQG+ MPLDLGAKGSC IGGN++TNAGGLRLLRYGSLHGSVLGLEV
Sbjct: 1923 FAAVCDADLDFFRSVLGDAGVVTDEHELQPFNQDWMGKYRGASRVALKPHSTEQAAAVLHHCNERRLAVVPQGGNTGLVGGSVPV----FDEVVLSTAAMNKVLSFDPVSGTLTAQAGCILEALDNHVAEQGYCMPLDLGAKGSCHIGGNVATNAGGLRLLRYGSLHGSVLGLEV 2093
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Match: A0A1Y1IKY2_KLENI (FAD/FMN-containing dehydrogenases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKY2_KLENI) HSP 1 Score: 226 bits (577), Expect = 1.890e-68 Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 1
Query: 73 SYASVTDADLDFFRGVVGADHVKTSPEDLESFNTDWMKKYRGASPAAVLPGNTEHVSRLLRHCNERRIAVVPQGGNTGLVGGSVPAGRAGVGEVVLSTSRMKRVVSFDPLAGVLTCEAGCILENLDAYLAEQGFAMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSVLGLEV 600
S+A +T D+ FF+GV+G V T + L NTDWM KY G S + P TE VSR+L HC+ERR+AVVPQGGN+GLVGGSVP EV+L+ M R+VSFD ++G+L CEAGCILE +DAYLAE+GF PLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHG+VLGLEV
Sbjct: 30 SFAQLTSDDVRFFQGVLGLGGVVTDDDLLAVANTDWMNKYHGKSKLLLRPRTTEQVSRVLAHCHERRLAVVPQGGNSGLVGGSVPL----FDEVILNLGAMDRIVSFDEVSGILVCEAGCILEKVDAYLAERGFVFPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGNVLGLEV 201 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14497.3249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14497.3249.1 >prot_E-fasciculatus_F_contig14497.3249.1 ID=prot_E-fasciculatus_F_contig14497.3249.1|Name=mRNA_E-fasciculatus_F_contig14497.3249.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=206bp MRFWSLRRARSQLQKSTGLFSSSSSYASVTDADLDFFRGVVGADHVKTSPback to top mRNA from alignment at E-fasciculatus_F_contig14497:381..1858- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14497.3249.1 ID=mRNA_E-fasciculatus_F_contig14497.3249.1|Name=mRNA_E-fasciculatus_F_contig14497.3249.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1478bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14497:381..1858- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14497:381..1858- >mRNA_E-fasciculatus_F_contig14497.3249.1 ID=mRNA_E-fasciculatus_F_contig14497.3249.1|Name=mRNA_E-fasciculatus_F_contig14497.3249.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1236bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14497:381..1858- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |