mRNA_E-fasciculatus_F_contig14484.3244.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14484.3244.1
Unique NamemRNA_E-fasciculatus_F_contig14484.3244.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14484.3244.1 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 1.220e-152
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 1 
Query:    1 GKHTSPCSVCEDLWRVAWSAREDFLRDLGRAEGQKGYNLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPCDMVEASNGALSVACAHWPTNLSGARRCTLLRYVSEDGSPPPGVADDPSLAGKPRDPRPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESPAGPVTKVHGLIGWDNKGTLQHMAKMSYMTERADR 687
            GKHTSPCSVCEDLWRVAWSAREDFLRDLGRAEGQKGYNLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPCDMVE+SNGALSVAC+HW TNLSG RRCTLLRYVSEDGSPPPGVADDPSLAGKPRD RPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESPAGPVT+VHGLIGWDNKGTLQHMAKMSYMTERADR
Sbjct:  229 GKHTSPCSVCEDLWRVAWSAREDFLRDLGRAEGQKGYNLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPCDMVESSNGALSVACSHWTTNLSGTRRCTLLRYVSEDGSPPPGVADDPSLAGKPRDSRPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESPAGPVTRVHGLIGWDNKGTLQHMAKMSYMTERADR 457
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14484.3244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKU1_9PHAE1.220e-15297.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14484contigE-fasciculatus_F_contig14484:1..2844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.2
Seed ortholog evalue1.1e-129
Seed eggNOG ortholog2880.D8LNH7
KEGG rclassRC00002,RC00078
KEGG koko:K00914,ko:K04679
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04144,ko04145,ko04350,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04144,map04145,map04350,map04371,map05152,map05167
GOsGO:0003674,GO:0005488,GO:0005543,GO:0008289,GO:0032266,GO:0035091,GO:0043167,GO:0043168,GO:1901981
EggNOG free text desc.1-phosphatidylinositol binding
EggNOG OGsCOG5032@1,KOG0906@2759,KOG1841@1,KOG1841@2759
EC2.7.1.137
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative phosphatidylinositol 3-kinase
Ec32 orthologEc-04_003810.1
Exons5
Model size687
Cds size687
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14484.3244.1prot_E-fasciculatus_F_contig14484.3244.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14484 1..2844 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927933.7438402-CDS-E-fasciculatus_F_contig14484:0..1431622927933.7438402-CDS-E-fasciculatus_F_contig14484:0..143Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 1..143 +
1695995757.0061524-CDS-E-fasciculatus_F_contig14484:0..1431695995757.0061524-CDS-E-fasciculatus_F_contig14484:0..143Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 1..143 +
1622927933.7604158-CDS-E-fasciculatus_F_contig14484:572..7261622927933.7604158-CDS-E-fasciculatus_F_contig14484:572..726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 573..726 +
1695995757.0191653-CDS-E-fasciculatus_F_contig14484:572..7261695995757.0191653-CDS-E-fasciculatus_F_contig14484:572..726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 573..726 +
1622927933.7718732-CDS-E-fasciculatus_F_contig14484:1329..14641622927933.7718732-CDS-E-fasciculatus_F_contig14484:1329..1464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 1330..1464 +
1695995757.0295682-CDS-E-fasciculatus_F_contig14484:1329..14641695995757.0295682-CDS-E-fasciculatus_F_contig14484:1329..1464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 1330..1464 +
1622927933.781016-CDS-E-fasciculatus_F_contig14484:2205..23611622927933.781016-CDS-E-fasciculatus_F_contig14484:2205..2361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 2206..2361 +
1695995757.0403793-CDS-E-fasciculatus_F_contig14484:2205..23611695995757.0403793-CDS-E-fasciculatus_F_contig14484:2205..2361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 2206..2361 +
1622927933.790598-CDS-E-fasciculatus_F_contig14484:2745..28441622927933.790598-CDS-E-fasciculatus_F_contig14484:2745..2844Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 2746..2844 +
1695995757.0534875-CDS-E-fasciculatus_F_contig14484:2745..28441695995757.0534875-CDS-E-fasciculatus_F_contig14484:2745..2844Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14484 2746..2844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14484.3244.1

>prot_E-fasciculatus_F_contig14484.3244.1 ID=prot_E-fasciculatus_F_contig14484.3244.1|Name=mRNA_E-fasciculatus_F_contig14484.3244.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=229bp
GKHTSPCSVCEDLWRVAWSAREDFLRDLGRAEGQKGYNLVASSGDNLRLY
AAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPC
DMVEASNGALSVACAHWPTNLSGARRCTLLRYVSEDGSPPPGVADDPSLA
GKPRDPRPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESPAGPVT
KVHGLIGWDNKGTLQHMAKMSYMTERADR
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mRNA from alignment at E-fasciculatus_F_contig14484:1..2844+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14484.3244.1 ID=mRNA_E-fasciculatus_F_contig14484.3244.1|Name=mRNA_E-fasciculatus_F_contig14484.3244.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2844bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14484:1..2844+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGAAGCACACGAGCCCGTGCTCCGTCTGCGAGGACCTCTGGAGGGTGGC
CTGGAGCGCGCGGGAGGACTTCCTGAGGGATCTCGGGAGAGCGGAGGGGC
AGAAGGGATATAACCTTGTGGCCAGCTCCGGCGACAATTTGAGGTGTGCA
ATGATAATCGAGTACTTGCTGTCAATCAGAGCTCTGTTGGGTGGTACTTT
GGAAGTGCTTTTAGGTTGTTCGATGATCATCCAGGACTAGCTGCTGCTCA
ATCTGAGGCCTGTTGGCTCTTGGGCACCAGTAGTTTCGGGAAGTGTTTTT
AGTTTCTATCTGTGTTCCCTGTGATGATTGATGAGTTGCTGCTGCTCAAT
CAGAGCTCTGTTGGCTTTTGGGCATCCTGAGAGGTTGGGAAGTGTTTTTC
GTCTTCTATCTCAATGTGTTGTTGCTGTGCTTTCGTGGACCGTGACCCCC
CCCTCTGCTGTGGGAACAATGCTCCGTCCGCTCGAGGACGCGTGGTCAAT
GGTCTCAACGACAAAAGGATGCAAAAAATAAATAAACATGAGTACACCCC
CCTCCCCCCCTACGACAAACAGGCTCTACGCAGCGGCGAACATGTTCTGG
GGGGGGCAGGCGATCCGCCTTCGCGTGGAGATGGAGGTGGCCGTCCCGCT
AGGGTTTGCCATGCGTTGGCTGGCGTCGCTGACGGCGAGGGGGGGGGTGT
ACTACCCCTATAGCGACACCGTCCCCGTAAGTCTTGTCTTTGTGGCGGGG
GGAGAAGGAAGGAAGGGTGATGAATCTTGGTCTTGCCGACTTACGTGTTG
AGGTTGATGAAACTTGTGGAGGACAGGGGTTGCTGAACGAGTGGATGAGT
GTTATCCATCCGGCACACGGCTCACGCTATACCCAACGACGGAATGGATG
TTAAACGGCGGTGGATGTTTGTGCTACGTCGATGTTTTTTTTTGGTATTT
TTCTGCTGGTTTTGGGCGGCAGACAAATGTGTGGTGGGAGGGGAGTGAGA
GAGAGGGCAGTCCGATACTGCTGTTGATGGCGGTGTTTGGGCATGGGTGT
AGCCGCACCACCTAGGTGTGTGGGTTGCTAATTGTTGCTGCCGCGGCGGA
ACGACCTCGTGCGGAATGAACGATGATGGTGCTGCGATACTGTGCGGACG
GCCGTTGTTGACAACAACCACGACAACAATCAACAGCCACCATCAATATC
ATGAAAAACACCAAGCATAGCAACGACAACAATAAACAACTTAACACAAA
CCACACCACCACTATCAACATCATGAAAGCACCACCAACAACAACAATAA
CAACAACAAATAACAAATAACAATGGCAGTGTGACATGGTGGAGGCGAGC
AACGGCGCCCTCAGCGTGGCGTGCGCGCACTGGCCCACCAACCTCTCGGG
GGCAAGGCGGTGCACGCTGCTGCGATACGTCTCCGAGGACGGATCCCCAC
CACCAGGCGTTGCGGTGAGAGCAATCTAATCTATAGTTTGGCAACCGAGC
CTGACGCGACTGACTTTGCATTACTGTACATTGGTGTTGGAAGGGGCGTG
TTTAATTGACTCTGCATGTAGTTGTTAAGGTGCTGTTTTCCGTGTGGTTG
GTGAAATGGTTCATGTAGTTGTTGCAAGAGGGTGTTGTTCGTGTGGTGGT
GAATTGATTCTGTGTGTGGGTGTGAACTGAGTTTGCGTGTAGGTGTTGCA
AGGGGCTGTTGGCAAAGGGGCTTATATCCGTGTGGACGGTGAACTGATTC
GGCGTGTAGGTGTCGCAAGAGGCTTTGTGTCCGTGTGGATGGTGAGCTGG
CTTTGCATGTAGATGTTGCTACATAGCGGCTCTTGTGCTTGTGCGTGCCC
ATCGTGCTCCGTGCTTGCGAGTCGCGCGGGCTGTGTTGCCTCTTACGTTG
GGCTCGACGCCACACGTGTATGTAAACGCCCTACATATGCGGGGACGCTT
TCTTCCGAACCTTTTTTGCCATCCTTTCTAGTGCAATACGTCTTGCTGCG
CCTTTTATACACTTTCCTCCCCAAAACCAAAAAAAAAAAAAAAAAAAAAG
TACGTAAATGTTGAACAACAAAAAATGACGCTCCCCCTACTGCTGTGATT
TTTTGTGCATACCCACCGTATGTTGTTATTTTGTTGTTGTTGTTCCACTC
ACGCTTATTTCGTGTTTTTTTTGTTTCGGTGCCGTTTTTGTTCTCATTTT
GGAAGGACGACCCCTCCTTGGCCGGCAAGCCACGGGACCCCCGCCCCACG
ATCGTGTTCACGACCATCGAGCACCCCATCATGCGGGAGTGGGCGCTGGC
TGGGGTGGACGTGGAGGTGTTCCCTTCTGGCCTCGTGCTTGAGGAGATGG
AATCTCCGGCGGTAAGCTTGGGAAAGGTTCATGCGTGTGTACCACTGCTG
TTTGGAGATATAGGGACGATTAACGATGTAAACGAGAGGACCCTTGGCAT
ACAAACGGGAGGACCGAATGGTCCTTTACTTTTGAAACAAGTGGTGGTAC
GTGTACGCATCATATGTCCGGCGAGCCACTTGTTCCCCTGACGATGTCAG
CCAGCGGAAGTTGTTGCAAGTATAGCAGAGCGATCGATCCCGGTCGGGTC
TGGATCAGACCACGCGATCCTTCGGCAGACGTGAGGGTTTTGGTCGCGCC
CATCTGAAGCCGTTGCCAAGGGTTGTCTCATCTCATCTCGCCCTGTTTTT
GTTTGTTTTTTTTCCTTGCGGGCTGTCTTTCTCTTTTGCTGGAAGGGCCC
TGTGACGAAGGTGCATGGGCTGATAGGGTGGGACAACAAGGGGACTCTGC
AGCACATGGCCAAGATGAGCTACATGACGGAGAGAGCGGACCGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14484:1..2844+

>mRNA_E-fasciculatus_F_contig14484.3244.1 ID=mRNA_E-fasciculatus_F_contig14484.3244.1|Name=mRNA_E-fasciculatus_F_contig14484.3244.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14484:1..2844+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGAAGCACACGAGCCCGTGCTCCGTCTGCGAGGACCTCTGGAGGGTGGC
CTGGAGCGCGCGGGAGGACTTCCTGAGGGATCTCGGGAGAGCGGAGGGGC
AGAAGGGATATAACCTTGTGGCCAGCTCCGGCGACAATTTGAGGGGAAGC
ACACGAGCCCGTGCTCCGTCTGCGAGGACCTCTGGAGGGTGGCCTGGAGC
GCGCGGGAGGACTTCCTGAGGGATCTCGGGAGAGCGGAGGGGCAGAAGGG
ATATAACCTTGTGGCCAGCTCCGGCGACAATTTGAGGCTCTACGCAGCGG
CGAACATGTTCTGGGGGGGGCAGGCGATCCGCCTTCGCGTGGAGATGGAG
GTGGCCGTCCCGCTAGGGTTTGCCATGCGTTGGCTGGCGTCGCTGACGGC
GAGGGGGGGGGTGTACTACCCCTATAGCGACACCGTCCCCGCTCTACGCA
GCGGCGAACATGTTCTGGGGGGGGCAGGCGATCCGCCTTCGCGTGGAGAT
GGAGGTGGCCGTCCCGCTAGGGTTTGCCATGCGTTGGCTGGCGTCGCTGA
CGGCGAGGGGGGGGGTGTACTACCCCTATAGCGACACCGTCCCCTGTGAC
ATGGTGGAGGCGAGCAACGGCGCCCTCAGCGTGGCGTGCGCGCACTGGCC
CACCAACCTCTCGGGGGCAAGGCGGTGCACGCTGCTGCGATACGTCTCCG
AGGACGGATCCCCACCACCAGGCGTTGCGTGTGACATGGTGGAGGCGAGC
AACGGCGCCCTCAGCGTGGCGTGCGCGCACTGGCCCACCAACCTCTCGGG
GGCAAGGCGGTGCACGCTGCTGCGATACGTCTCCGAGGACGGATCCCCAC
CACCAGGCGTTGCGGACGACCCCTCCTTGGCCGGCAAGCCACGGGACCCC
CGCCCCACGATCGTGTTCACGACCATCGAGCACCCCATCATGCGGGAGTG
GGCGCTGGCTGGGGTGGACGTGGAGGTGTTCCCTTCTGGCCTCGTGCTTG
AGGAGATGGAATCTCCGGCGGACGACCCCTCCTTGGCCGGCAAGCCACGG
GACCCCCGCCCCACGATCGTGTTCACGACCATCGAGCACCCCATCATGCG
GGAGTGGGCGCTGGCTGGGGTGGACGTGGAGGTGTTCCCTTCTGGCCTCG
TGCTTGAGGAGATGGAATCTCCGGCGGGCCCTGTGACGAAGGTGCATGGG
CTGATAGGGTGGGACAACAAGGGGACTCTGCAGCACATGGCCAAGATGAG
CTACATGACGGAGAGAGCGGACCGGGGCCCTGTGACGAAGGTGCATGGGC
TGATAGGGTGGGACAACAAGGGGACTCTGCAGCACATGGCCAAGATGAGC
TACATGACGGAGAGAGCGGACCGG
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